Mus pahari (shrew mouse): 110322758
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Entry
110322758 CDS
T05929
Symbol
Tnc
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04151
PI3K-Akt signaling pathway
mpah04510
Focal adhesion
mpah04512
ECM-receptor interaction
mpah05165
Human papillomavirus infection
mpah05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
110322758 (Tnc)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110322758 (Tnc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110322758 (Tnc)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
110322758 (Tnc)
09172 Infectious disease: viral
05165 Human papillomavirus infection
110322758 (Tnc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mpah00536
]
110322758 (Tnc)
Glycosaminoglycan binding proteins [BR:
mpah00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110322758 (Tnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_2
EGF_Tenascin
Pur_ac_phosph_N
EGF
DUF4998
fn3_2
NDNF
Interfer-bind
hEGF
GH101_dom-5
Motif
Other DBs
NCBI-GeneID:
110322758
NCBI-ProteinID:
XP_021055154
Ensembl:
MGP_PahariEiJ_G0028437
LinkDB
All DBs
Position
6:complement(17853855..17943024)
Genome browser
AA seq
2018 aa
AA seq
DB search
MGAITWLLPGIFLALFALTPEGGVLKKIIRHKRESGLNMTLPEENQPVVFNHIYNIKLPM
GSQCSVDLESASGEKDLTPTPESSGSFQEHTVDGENQIVFTHRINIPRRACGCAAAPDVK
ELLSRLEELELLVSSLREQCTMGTGCCLQPAEGRLDTRPFCSGRGNFSAEGCGCVCEPGW
KGPNCSEPECPGNCNLRGQCLDGQCICDEGFTGEDCSQLACPNDCNDQGRCVNGVCVCFE
GYAGPDCGLEVCPVPCSEEHGMCVDGRCVCKDGFAGEDCNEPLCLNNCYNRGRCVENECV
CDEGFTGEDCSELICPNDCFDRGRCVNGTCYCEEGFTGEDCGELTCPNDCQGRGQCEEGQ
CVCNEGFAGADCSEKRCPADCHHRGRCLNGQCECDDGFTGADCGDLQCPNGCSGHGRCVN
GQCVCDEGYTGEDCSLRRCPNDCHNRGLCVQGKCICEQGFKGFDCSEMSCPNDCHQHGRC
VNGMCICDDDYTGEDCRDRRCPRDCSQRGRCVDGQCICEDGFTGPDCAELSCPSDCHGHG
RCVNGQCICHEGFTGNDCKEQRCPSDCHGQGRCEDGQCICHEGFTGPDCGQRSCPNDCSN
QGQCVSGRCICNEGYTGVDCSEVSPPKDLIVTEVTEETVNLAWDNEMRVTEYLIMYTPTH
ADGLEMQFRVPGDQTSTTIRELEPGVEYFIRVFAILENKRSIPVSARVATYLPAPEGLKF
KSIKETSVEVEWDPLDIAFETWEIIFRNMNKEDEGEITKSLRRPETSYRQTGLAPGQEYE
ISLHIVKNNTRGPGLKKVTTTRLDAPSHIEVKDVTDTTALITWFKPLAEIDSIELSYGTK
DVPGDRTTIDLTHEDNQYSIGNLRPDTEYEVSLISRRVDMASNPAKETFITGLDAPRNLR
RVSQTDNSITLEWRNVKADIDSYRIKYAPISGGDHAEIDVPKSQQATTKTTLTGLRPGTE
YGIGVSAVKGDKESDPATINAATEIDAPKDLQVSEITQDSLTLFWTTPLAKFDRYRLNYS
LPTGQSMEVQLPKDATSHVLTDLEPGQEYAVLLTAEKGRHKSKPARVKASTEEVPTLENL
TVTEAGWDGLSLNWTADDLAYEYFVIQVQEANKVETAHNFTVPGNLRAADIPGLKAATPY
RVSIYGVARGYRTPVLSAETSTGKTPSLGEVTVAEVGWDAIMLNWTAPEGAYENFFIQVL
EADATQTVQNLTVPGGLRSVDLPGLKAATRYYITLRGVTQDFSTTPLSVEVLTEDFPQLG
GLSVTEVTWDSLTLNWTTDDAYKHFVIQVQEANNVEAAQNLTVPGSLRAVDIPGLKADTP
YRVSIYGVIQGYRTPMLSTDVSTAKEPEIGNLNVSDITPEGFNLSWTATDGIFDMFTIEI
IDSNRLLQTAEHNISGAERTARISGLPPSTDFIVYLSGIAPSIRTKTISTTATTEAEPEV
DHLLVSDATPDGFRLSWTADEGIFDSFVVRIRDTKKQSEPQEITLHSPERTRDITGLREA
TEYEIELYGISRGRRSQPVSAIATTAMGSPKEIMFSDITENAATVSWRAPTAQVESFRIT
YVPMTGGTLSMVTVDGTDTEARLVRLTPGVEYRVSVIAMKGFEESDPVSGSLITALDGPS
GLLIANITDSEALAMWQPAIATVDSYVISYTGERVPEVTRTVSGNTVEYELHDLEPATEY
ILSIFAEKGEQKSSTIATKFTTDLDSPREFTATEVQTETALLTWRPPRASITGYLLVYES
VDGTVKEVIVGPDTTSYSLADLSPSTHYTARIQALSGSLRSKLIQTIFTTIGLLYPFPRD
CSQAMLNGDTTSGLYTIYINGDKTQALEVYCDMTSDGGGWIVFLRRKNGHEDFYRNWKAY
AAGFGDRREEFWLGLDNLSKITAQGQYELRVDLQDHGESAYAVYDRFSVGDAKSRYKLKV
EGYSGTAGDSMNYHNGRSFSTYDKDTDSAITNCALSYKGAFWYKNCHRVNLMGRYGDNNH
SQGVNWFHWKGHEYSIQFAEMKLRPSNFRNLEGRRKRA
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atgggggccattacctggctattgccaggcatctttctagctttgtttgccctcactccc
gaaggtggggtcctcaagaaaatcatcaggcacaagcgagagagtggactgaacatgacc
ctgccagaagagaatcagccagtggtgttcaaccacatctacaacatcaagttacccatg
ggttcccaatgctcagtggatctggagtcagcgagtggggagaaagacctgacccccacg
ccagagtccagtgggagcttccaggaacatacagtggatggagaaaaccaaattgtgttc
acacaccgcatcaacatcccccgacgggcctgtggctgtgctgcagctccagatgtgaag
gagctcctgagcaggctggaggagctggagttgctggtgtcgtctctaagggagcaatgc
accatgggtacaggctgttgcctccaacctgcagaaggtcgtctggacaccaggcccttc
tgcagcggccggggcaacttcagtgcagaaggctgcggctgtgtctgtgaaccaggctgg
aaaggtcccaactgctctgagcccgaatgccctgggaactgtaatctcagaggccagtgc
cttgatggccagtgtatctgtgacgagggtttcactggggaagactgtagccagctggcc
tgtcccaacgactgcaatgaccagggcaggtgtgtgaatggggtctgtgtgtgcttcgaa
ggctatgccggccccgactgtggcctggaagtctgcccagtgccctgcagcgaggaacac
gggatgtgtgtggatggcaggtgtgtgtgcaaagatggctttgcgggtgaagactgcaac
gagcccctttgcctcaacaactgctacaaccgtgggcggtgtgtggagaacgagtgtgtc
tgcgacgagggcttcactggcgaggactgcagtgagctcatttgccccaatgactgcttc
gaccgcggtcgctgcgtcaatggcacctgctactgtgaagaaggtttcacgggcgaagac
tgcggtgagctcacctgccccaacgactgtcagggccgtggccagtgtgaggagggacag
tgtgtttgcaatgagggctttgccggggcagactgcagtgaaaagcggtgtcccgccgat
tgtcaccaccgcggccgctgcctcaacgggcagtgtgagtgtgacgatgggttcacaggg
gctgactgtggggatctccagtgtcccaatggctgcagtgggcacggccgttgtgtcaac
gggcagtgcgtgtgtgacgagggctacacgggagaagactgcagtctgcggcgatgcccc
aatgactgccacaaccggggtctctgcgtacagggcaagtgcatatgtgaacaaggcttc
aagggctttgactgcagtgagatgagctgtcccaacgactgccaccaacatggccgatgt
gtgaatggcatgtgtatctgtgatgatgactacactggggaggactgcagagaccggcgc
tgcccccgggactgtagccagcgggggcgctgtgtggacggacagtgcatctgtgaggat
ggcttcactggtcctgactgcgctgagctttcctgtcccagtgactgccacggccatggc
cgctgtgtgaatggccaatgcatctgccacgagggcttcactggcaatgactgcaaagag
caaaggtgccccagtgactgccatggccaaggtcgctgtgaggacggccagtgtatctgc
catgagggcttcacgggtccggactgtgggcagcgctcctgtcccaatgactgcagcaac
cagggacaatgtgtgtcaggccgctgcatctgcaatgaaggctacacaggggtagactgc
tctgaggtgtcccctcccaaagaccttattgtgacagaagtaacagaggagactgtaaat
ctggcatgggacaatgagatgcgggtcactgagtacctcattatgtacacacccacccat
gctgatggcctggagatgcagttccgtgtacctggggaccagacatccaccaccatccgg
gaactggagccaggagtggagtacttcattcgtgtgttcgccatcttggaaaacaagagg
agcatccctgtcagtgccagggttgccacctacttgcctgcacctgaaggtctaaaattc
aagtctatcaaggagacatctgtggaagtagaatgggatcctctcgacattgctttcgaa
acatgggagatcattttccgaaatatgaacaaagaagatgagggagaaatcacaaaaagc
ctgaggaggccagagacctcctaccgccaaactggccttgcccctggccaagagtatgag
atatctctgcacattgtgaaaaacaacacccgaggccccggcttgaagaaagtgaccaca
acccgcctggatgcccccagccatattgaggtgaaagatgtcacagacaccacagcgctg
atcacctggttcaagcccttggctgaaattgatagcattgagctctcctatggcaccaag
gatgtacctggagaccgtaccaccatcgacctcacacacgaagacaaccagtactccatt
gggaacctgagacctgacacagagtatgaggtgtccctcatctcccgcagagtggacatg
gcaagcaaccctgccaaagagaccttcatcacaggcctggatgctcccaggaatctccgc
cgcgtctcacagacagacaacagcatcaccttggagtggaggaatgtcaaggcagacatt
gacagttacagaattaagtatgcccctatctctggaggtgaccatgctgaaatagatgtt
ccaaagagccagcaagccacaaccaaaaccacactcacaggtctaaggccaggaactgaa
tatggaattggtgtctctgctgtcaagggagacaaggagagcgatccagcaaccatcaat
gcggccacagaaatcgatgcacccaaggacttgcaagtgtctgaaatcacacaagacagt
ctgactttattctggacgacacccctggccaagtttgatcgttaccgcctcaactacagc
ctccccacaggccagtcgatggaagtccagctgccaaaggatgccacctcccatgtcctg
acagatctggagccagggcaagaatatgctgtcctcctcactgctgagaagggcagacac
aagagcaagcctgcacgtgtgaaggcatccacggaagaagtgcctaccctggaaaatctc
accgtgactgaggccggttgggatggcctcagcctcaactggactgcagatgacctggcc
tatgagtactttgtcattcaggtacaggaagccaacaaagtggagactgctcacaacttc
acagtacctggcaacctccgggctgcagacatcccaggcctcaaggctgccacaccttat
agagtctccatctatggggtagctcggggctatagaacaccagtgctctctgctgagacc
tccacagggaaaactcccagtttgggagaggtcactgtggccgaggtgggctgggatgcc
atcatgctcaactggactgctccagagggagcctatgagaactttttcattcaggtgcta
gaggctgacgcgacccagactgtccagaacctcacagtcccaggaggactgaggtcagtg
gacctgcctgggctcaaagcagccacccgctattacatcacccttcgaggggtcacccag
gacttcagcacgacccctctctctgttgaggtcttgacagaggatttccctcagctggga
ggcttgtctgtgactgaggtcacctgggacagcctcacactcaactggaccacagatgac
gcctataagcactttgtcattcaggtgcaggaggccaacaatgtggaggctgctcagaac
ctcacggtacccggcagcctcagagctgtggacatcccaggcctcaaggccgacacccct
tatagagtctccatctatggggtcatccagggctatagaacaccgatgctctctactgat
gtctccacagccaaagaacctgaaattggaaacctaaatgtttctgatataactcctgag
ggcttcaatctctcctggacagcgaccgacgggatcttcgacatgtttaccattgaaatt
attgattctaataggttgctgcagacagcagaacataatatatctggtgctgagcgaact
gcccgcatctcagggcttccacctagtactgacttcattgtctacctctctggaattgct
cccagcatccgtaccaaaaccatcagtaccacagccaccacagaagctgaaccggaagtt
gaccaccttctagtttcagatgccactccagacggtttccgtctgtcctggactgctgat
gaagggatattcgacagttttgttgtcaggatcagagataccaaaaagcaatctgaacca
caagaaataaccctccattcccccgaacgtaccagggacataacaggtctcagagaggcc
actgagtatgaaattgaactttatggaataagccgtggaaggcgatcccagccagtcagt
gccatagcaacaacagccatgggttctccgaaggaaatcatgttctcagacatcactgaa
aatgcagccacagtcagctggagggcacctactgctcaggtggagagtttccggatcact
tatgtgcctatgacaggaggtaccctgtccatggtgaccgtggatggaacagatactgag
gcccggctggtgaggctcacccctggggtagagtaccgcgtcagtgtgattgccatgaag
ggattcgaagaaagtgatccagtctccggatctctaatcacagctctggatggtccatct
ggtcttctgatagccaacatcacagattcagaagccttggccatgtggcagccagccatt
gccactgtggacagttatgtcatctcctacacaggggagagagtgccagaagttacacgc
acagtgtctggaaatacagtggagtacgagctgcatgacctggagcctgccacagagtac
atactgagtatctttgcagagaagggagaacagaagagctctaccatcgctaccaagttt
accacagacctcgactccccaagagaatttactgctacagaggttcagacggaaactgcc
ctcctcacctggagacctccccgagcatccatcactggatacctcctggtctatgaatct
gtggatggtacagtcaaggaagtcattgtggggcctgacaccacctcctacagcctggca
gacctgagcccatccacccactacacagcaaggatccaggcattgagtgggtccctgagg
agcaagctgatccaaaccatcttcaccacaattggactcctgtacccattccccagggac
tgctctcaagcaatgttgaatggtgatactacctctggcctctacaccatctatataaat
ggtgacaagacccaagcactggaagtctactgtgatatgacctctgatggaggtggatgg
attgttttcctgagacgcaaaaatggacatgaggacttctatcgcaactggaaggcctat
gctgctgggtttggagaccgcagagaagaattttggcttggactggataacctgagcaaa
atcacagcccaagggcagtacgagctccgggtggacctacaagaccatggggagtcggcc
tatgctgtgtatgacagattcagtgttggagatgccaagagtcgctacaagctgaaggta
gaaggatacagtggaacagcaggtgactccatgaactatcacaacggtagatccttctcc
acctatgacaaggacacagactcagccatcaccaactgtgccctgtcctacaaaggagct
ttctggtataagaactgtcatcgtgtcaacctgatgggcagatatggggacaataaccac
agtcagggcgttaactggttccattggaagggccatgagtactcaatccagtttgctgag
atgaaattgagacccagcaacttccgcaatctggaaggcaggcgtaagcgggcgtaa
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integrated database retrieval system