KEGG   Mus pahari (shrew mouse): 110322923
Entry
110322923         CDS       T05929                                 
Symbol
Ybx1
Name
(RefSeq) nuclease-sensitive element-binding protein 1
  KO
K09276  Y-box-binding protein 1
Organism
mpah  Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mpah03000]
    110322923 (Ybx1)
   03019 Messenger RNA biogenesis [BR:mpah03019]
    110322923 (Ybx1)
   03041 Spliceosome [BR:mpah03041]
    110322923 (Ybx1)
Transcription factors [BR:mpah03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   Cold-shock domain factors, YB-1/DbpB-like
    110322923 (Ybx1)
Messenger RNA biogenesis [BR:mpah03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Other mRNA localization factors
     110322923 (Ybx1)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     110322923 (Ybx1)
Spliceosome [BR:mpah03041]
 Common components
  Common spliceosomal components
   General mRNP proteins
    110322923 (Ybx1)
SSDB
Motif
Pfam: CSD OB_RNB S1CSD-TOTE-2
Other DBs
NCBI-GeneID: 110322923
NCBI-ProteinID: XP_021055528
Ensembl: MGP_PahariEiJ_G0028725
LinkDB
Position
6:complement(70408791..70424923)
AA seq 322 aa
MSSEAETQQPPAAPAAALSAADTKPGSTGSGAGSGGPGGLTSAAPAGGDKKVIATKVLGT
VKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEA
ANVTGPGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEGQA
QQRRPYRRRRFPPYYMRRPYARRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNVYRGYR
PRFRRGPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKE
TKAADPPAENSSAPEAEQGGAE
NT seq 969 nt   +upstreamnt  +downstreamnt
atgagcagcgaggccgagacccagcagccgcccgccgcccccgccgccgccctcagcgcc
gccgacaccaagcccggctccacgggcagcggcgcgggtagcggcggcccgggcggcctc
acatcggcggcgcccgccggcggggacaagaaggtcatcgcaacgaaggttttgggaaca
gtcaaatggttcaatgtaaggaacggatacggtttcatcaacaggaatgacaccaaggaa
gacgtatttgtacaccagactgccataaagaagaataaccccaggaagtaccttcgcagt
gtaggagatggagagactgtggagtttgatgttgttgaaggagaaaagggtgcggaggca
gcaaatgttacaggccctggtggagttccagttcaaggcagtaaatacgcagcagaccgt
aaccattatagacgctatccacgtcgtaggggtcctccacgcaattaccagcaaaattac
cagaatagtgagagtggggaaaagaacgagggatcggaaagtgctcctgaaggccaggcc
caacaacgccggccatatcgcaggcgaaggttcccaccttactacatgcggagaccctat
gcgcgtcgaccacagtattccaacccccctgtgcaaggagaagtgatggagggtgctgac
aaccagggtgcaggagagcaaggtagaccagtgagacagaatgtgtatcggggttacaga
ccacgattccgaaggggccctcctcgccaaagacagcctagagaggatggcaatgaagag
gacaaagagaatcaaggagatgagacccaaggtcagcagccaccacaacgtcggtatcgc
cgcaacttcaattaccgacgcagacgcccagagaaccctaaaccacaagatggcaaagag
acaaaagcagccgatccaccagctgagaattcgtccgctcccgaggctgagcagggcggg
gctgagtaa

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