Mus pahari (shrew mouse): 110322923
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Entry
110322923 CDS
T05929
Symbol
Ybx1
Name
(RefSeq) nuclease-sensitive element-binding protein 1
KO
K09276
Y-box-binding protein 1
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110322923 (Ybx1)
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110322923 (Ybx1)
03041 Spliceosome [BR:
mpah03041
]
110322923 (Ybx1)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
110322923 (Ybx1)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
110322923 (Ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
110322923 (Ybx1)
Spliceosome [BR:
mpah03041
]
Common components
Common spliceosomal components
General mRNP proteins
110322923 (Ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
110322923
NCBI-ProteinID:
XP_021055528
Ensembl:
MGP_PahariEiJ_G0028725
LinkDB
All DBs
Position
6:complement(70408791..70424923)
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AA seq
322 aa
AA seq
DB search
MSSEAETQQPPAAPAAALSAADTKPGSTGSGAGSGGPGGLTSAAPAGGDKKVIATKVLGT
VKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEA
ANVTGPGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEGQA
QQRRPYRRRRFPPYYMRRPYARRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNVYRGYR
PRFRRGPPRQRQPREDGNEEDKENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKE
TKAADPPAENSSAPEAEQGGAE
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacccagcagccgcccgccgcccccgccgccgccctcagcgcc
gccgacaccaagcccggctccacgggcagcggcgcgggtagcggcggcccgggcggcctc
acatcggcggcgcccgccggcggggacaagaaggtcatcgcaacgaaggttttgggaaca
gtcaaatggttcaatgtaaggaacggatacggtttcatcaacaggaatgacaccaaggaa
gacgtatttgtacaccagactgccataaagaagaataaccccaggaagtaccttcgcagt
gtaggagatggagagactgtggagtttgatgttgttgaaggagaaaagggtgcggaggca
gcaaatgttacaggccctggtggagttccagttcaaggcagtaaatacgcagcagaccgt
aaccattatagacgctatccacgtcgtaggggtcctccacgcaattaccagcaaaattac
cagaatagtgagagtggggaaaagaacgagggatcggaaagtgctcctgaaggccaggcc
caacaacgccggccatatcgcaggcgaaggttcccaccttactacatgcggagaccctat
gcgcgtcgaccacagtattccaacccccctgtgcaaggagaagtgatggagggtgctgac
aaccagggtgcaggagagcaaggtagaccagtgagacagaatgtgtatcggggttacaga
ccacgattccgaaggggccctcctcgccaaagacagcctagagaggatggcaatgaagag
gacaaagagaatcaaggagatgagacccaaggtcagcagccaccacaacgtcggtatcgc
cgcaacttcaattaccgacgcagacgcccagagaaccctaaaccacaagatggcaaagag
acaaaagcagccgatccaccagctgagaattcgtccgctcccgaggctgagcagggcggg
gctgagtaa
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