Mus pahari (shrew mouse): 110322999
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Entry
110322999 CDS
T05929
Symbol
Fbxo42
Name
(RefSeq) F-box only protein 42
KO
K10317
F-box protein 42
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mpah04121
]
110322999 (Fbxo42)
Ubiquitin system [BR:
mpah04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110322999 (Fbxo42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_4
Kelch_3
Kelch_5
Kelch_1
Kelch_2
Kelch_6
NANM
F-box-like
F-box
F-box_5
Motif
Other DBs
NCBI-GeneID:
110322999
NCBI-ProteinID:
XP_021055666
Ensembl:
MGP_PahariEiJ_G0029066
LinkDB
All DBs
Position
6:92084744..92145492
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AA seq
717 aa
AA seq
DB search
MASSSDSEDDSFMAVDQEETAVEGTMEQDEDPHPVLEVEETRHNRSMSELPEEVLEYILS
FLSPYQEHKTAALVCKQWYRLIKGVAHQCYHGFMKAVQEGNIQWESRTYPYPGTPITQRF
SHSACYYDANQSMYVFGGCTQSSCNAAFNDLWRLDLNSKEWIRPLASGSYPSPKAGATLV
VYKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCIVTTHGPPPMAGHSSCVI
GDKMIVFGGSLGSRQMSNEVWVLDLEQWAWSKPNISGPSPHPRGGQSQIVIDDTTLLILG
GCGGPNALFKDAWLLHMHPGPWAWQPLKVENEDHGAPELWCHPACRVGQCVVVFSQAPSG
RAPLSPSLNSRPSPISATPPALVPETREYRSQSPVRSMDEAPCVNGRWGTLRPRAQRQTP
SGSREGSLSPARGDGSPILNGGNLSPGAAAVGGASLDSPVQAVSPSTPSASDGSDLKVGL
SLAPRRGSLPDQKDLRLSSIDLNWDLKSASSSSHVDSTDNRTVAGSVRHPPEQTNGVHTP
PHVASALAGAVSPGALRRSLEAIKAMSSKGPSASAALSPPLGSSPSSPGSQSLSSGETVP
IPRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPLYQSMNCKPMQMYVLDIKDTKEKGRV
KWKVFTSSSVVGPPETSLHTVVQGRGELIIFGGLMDKKQNVKYYPKTNALYFVRAKR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggccagctcctcggacagtgaagatgacagtttcatggccgtggaccaagaagaaact
gcagtggaagggacaatggagcaagatgaggacccccacccagtgttggaggttgaggag
acaagacataataggtccatgtctgagctgccggaagaggttttggagtatattctgtcc
ttcctttcaccataccaggaacacaagactgcagctctggtctgcaaacagtggtatcgg
cttatcaaaggtgtggcccaccagtgttaccatggtttcatgaaggctgtccaggaagga
aacattcagtgggagagccggacttacccatatcctggaacccccatcactcagcgcttc
tcccacagtgcgtgctattatgatgccaatcagtctatgtatgtctttggaggctgtacc
cagagcagttgcaatgctgccttcaatgacctctggaggctagacctaaatagcaaagag
tggattcgaccactggcctcagggtcctatccttcccccaaagctggggccactctggtc
gtgtacaaggacttgctagtgctatttggtggctggacaaggccaagtccctatccctta
caccagccagagagattctttgatgaaattcacacgtactcaccatctaaaaactggtgg
aactgcattgtcaccacgcacgggcctcctcccatggctggccattcctcctgtgtgata
ggagataaaatgattgtcttcggcggctccttaggatcccggcagatgagcaacgaagtc
tgggtcctggacctggagcagtgggcgtggtccaagccgaacatctctggccccagtcct
caccctcgaggtggccagtctcagattgttatagatgatacaactctcctgatccttggc
gggtgtggcggtcccaatgcgctgttcaaagatgcctggctgctgcacatgcacccaggg
ccctgggcctggcagccactcaaggtagaaaatgaagaccatggtgccccggagctgtgg
tgtcatccagcctgccgggtgggacagtgtgtggtggtcttcagccaggcaccgagcggg
agagcgcccctcagccccagtttgaactctcgcccgtcacctatcagtgccactcctcca
gccttggttcccgagacccgagagtaccgctcccagtccccggtgaggagtatggacgaa
gcaccttgtgttaatggccgctggggaacactgaggcccagggctcaaaggcagactccc
tcaggttcccgggaagggagcctctccccagccagaggagacggctctcctattctcaat
ggtgggaatttgtctccaggggcagcagctgtcgggggtgcttccttagatagccctgta
caggccgtgtctccaagcacgccgtctgcctctgacggctccgacctaaaagtaggactt
tctctagctcctcgacgagggtctttacccgatcagaaggacctgaggttaagttccatt
gatctgaattgggacctgaagtctgcttccagtagcagtcatgtggatagtacagacaat
aggacagttgcagggagtgtgagacaccctccagaacagaccaatggtgttcacacccca
ccacatgtggccagtgcccttgcgggggctgtatctcccggtgccctgcgtcggagtttg
gaagccatcaaagcgatgtcatccaaaggcccctcagcttcggcagcactaagtcctcct
cttgggtcttctccgagctcccctgggagtcagagcctgagcagtggagaaacagtgccc
atccctcgcccaggaccagcccaaggagatggtcattccttaccccccattgctcggcgc
ctgggccaccaccctccacagtccctcaatgtgggcaaacccttgtaccagagtatgaac
tgcaaacccatgcagatgtatgtgctggacattaaagacaccaaggagaagggccgagtc
aagtggaaagtgttcactagcagctccgtggtcgggcctcctgagaccagcctgcacaca
gtggtgcagggccgaggggagctcatcatatttggagggctcatggacaagaagcagaat
gtgaagtactatccaaaaacaaacgccttgtactttgtgcgggcaaagagataa
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integrated database retrieval system
