Mus pahari (shrew mouse): 110323026
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Entry
110323026 CDS
T05929
Symbol
Polr2i
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
KO
K03017
DNA-directed RNA polymerase II subunit RPB9
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03020
RNA polymerase
mpah03420
Nucleotide excision repair
mpah05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110323026 (Polr2i)
09124 Replication and repair
03420 Nucleotide excision repair
110323026 (Polr2i)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
110323026 (Polr2i)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpah03021
]
110323026 (Polr2i)
03400 DNA repair and recombination proteins [BR:
mpah03400
]
110323026 (Polr2i)
Transcription machinery [BR:
mpah03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
110323026 (Polr2i)
DNA repair and recombination proteins [BR:
mpah03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110323026 (Polr2i)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_RPB9
Zn_ribbon_TFIIS
Zn_ribbon_recom
Ogr_Delta
Zn_ribbon_GRF_2
HVO_0758
TtuA_LIM_N
Zn_ribbon_NrdR
Motif
Other DBs
NCBI-GeneID:
110323026
NCBI-ProteinID:
XP_021055710
Ensembl:
MGP_PahariEiJ_G0012741
LinkDB
All DBs
Position
1:3185883..3187177
Genome browser
AA seq
125 aa
AA seq
DB search
MEPDGTYEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITH
EVDELTQIIADVSQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCG
HRWTE
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgacgggacgtacgagcccggcttcgtgggtattcggttctgccaggaatgt
aataacatgctgtaccccaaggaggacaaggagaatcgcattctgctgtacgcgtgccgc
aattgcgattaccagcaggaagccgacaacagctgcatctacgtcaacaaaatcacgcac
gaagtggacgagctgacccagatcatcgcagacgtgtcccaggaccccacgttgccccgg
accgaggaccacccgtgccagaagtgtggccacaaggaggcagtgttcttccagtcacac
agtgcccgagctgaggacgccatgcgactgtactatgtatgtactgccccacactgcggc
caccgctggactgagtga
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