Mus pahari (shrew mouse): 110323056
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Entry
110323056 CDS
T05929
Symbol
Prdm16
Name
(RefSeq) PR domain zinc finger protein 16
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah00310
Lysine degradation
mpah01100
Metabolic pathways
mpah04714
Thermogenesis
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
110323056 (Prdm16)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
110323056 (Prdm16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110323056 (Prdm16)
03036 Chromosome and associated proteins [BR:
mpah03036
]
110323056 (Prdm16)
Enzymes [BR:
mpah01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
110323056 (Prdm16)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
110323056 (Prdm16)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
110323056 (Prdm16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
PRDM2_PR
SET
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_11
zf-H2C2_5
zf-BED
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
110323056
NCBI-ProteinID:
XP_021055759
Ensembl:
MGP_PahariEiJ_G0029220
LinkDB
All DBs
Position
6:complement(105219667..105539977)
Genome browser
AA seq
1257 aa
AA seq
DB search
MRSKARARKLAKSDGDVVNNMYEPDPDLLAGQSAEEETEDGILSPIPMGPPSPFPTSEDF
TPKEGSPYEAPVYIPEDIPIPPDFELRESSIPGAGLGIWAKRKMEIGERFGPYMVTPRAA
LKEADFGWEQMLTDTEVSSQESCIKKISEDLGSEKFCVNADQTGSGSWLKYIRVACSCDD
QNLAMCQINEQIYYKVIKDIEPGEELLVHVKEGAYSLSVMAPSLDEDPTFRCDECDELFQ
CRLDLRRHKKYACSSAGAPLYEGLGEELKPEGLGVGSDGQAHECKDCERMFPNKYSLEQH
MIVHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECENCVKVFTDPSNLQRHIRSQ
HVGARAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEVCHKSYTQFSNLCRHKRMHADC
RTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHYTPGGIFTPGLPLTPSPMMDKTKPSPTLN
HGGLGFSEFFPSRPHPGSLPFSAAPPAFPALTPGFPGIFPPSLYPRPPLLPPTPLLKSPL
NHAQDAKLPSPLGNPALPLVSAVSNSSQGATAATGPEEKFDGRLEDTYAEKVKNRSPDMS
DGSDFEDINTTTGTDLDTTTGTGSDLDSDLDSDRDKGKDKGKPAESKPEFGGASVPPGAM
NSVAEVPGFYSQHSFFPPPEEQLLTASGAAGDSIKAIASIAEKYFGPGFMSMQEKKLGSL
PYHSVFPFQFLPNFPHSLYPFTDRALAHNLLVKAEPKSPRDALKVGGPSAECPFDLTTKP
KEAKPALLAPKVPLVPSSGEEQPLDLSIGSRARASQNGGSREPRKNHIYGERKPGVGEGL
PKVCPAQLPQQPSLHYAKPSPFFMDPIYSRVEKRKVADPVGVLKEKYLRPSPLLFHPQMS
AIETMTEKLESFAAMKADSGSSLQPLPHHPFNFRSPPPTLSDPILRKGKERYTCRYCGKI
FPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQ
QTNLDRHLKKHEHEGAPVSQHSGVLTNHLGTSASSPTSESDNHALLDEKEDSYFSEIRNF
IANSEMNQASTRMDKRSEIQDLDSNPPCPGSASAKQEDVEEEEEEELEEEDDDSLAGKSQ
EDTVSPTPEPQGVYEDEEDEEPPSLTMGFDHTRRCVEERGGGLLALEPTPTFGKGLDLRR
AAEEAFEVKDVLNSTLDSEVLKQTLYRQAKNQSSLDAWLNITGPSSESGAFNPINHL
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgcgatccaaggcgagggcgaggaagctagccaaaagtgacggtgacgttgtaaataat
atgtatgaacctgacccggacctgctggccggccagagtgctgaggaggagaccgaggac
ggcatcctgtcccccatccccatggggccgccgtcccccttccctaccagcgaggacttc
actcccaaggagggctcgccctatgaggctcctgtctacattcctgaagacattccaatc
ccaccagacttcgagctgcgagagtcctccataccaggagctggcctggggatctgggcc
aagcggaagatggaaatcggggagaggtttggcccctacatggtgacgccccgggccgca
ctgaaggaggctgactttggatgggagcagatgctgacggatacagaggtgtcatcccag
gagagctgcatcaaaaagatctctgaagacttgggtagcgagaagttctgcgtgaatgcc
gatcagacggggtctggcagctggctcaagtacatccgtgtagcgtgttcctgtgatgac
caaaacctcgccatgtgtcagatcaatgaacagatttactataaagtcattaaggacatc
gagcctggagaggagctgttggtgcatgtgaaagaaggtgcctactccttgagtgtcatg
gcccccagcctggatgaggaccccacattccgctgtgacgagtgtgacgagctcttccag
tgcaggctggacctgaggcgccacaagaagtacgcgtgcagctctgcaggggccccgctc
tacgagggcctaggggaggagctcaagcccgagggccttggcgtgggcagcgatgggcaa
gcgcatgagtgcaaggactgcgagcggatgttccccaacaagtacagcttggagcaacac
atgatcgtccacacggaagagcgtgagtacaaatgtgaccagtgtcccaaggccttcaac
tggaagtccaacctcatccgccaccagatgtctcacgacagcggcaagcgcttcgaatgt
gaaaactgtgtcaaggtgttcacggaccccagcaacctccagcgtcacatccgctcacag
catgttggtgcccgggcccatgcctgccctgactgcggcaagaccttcgccacatcctct
ggcctcaaacagcacaaacatatccacagcacggtgaagccattcatatgtgaggtctgc
cacaagtcctacacacagttctccaacctgtgccggcacaagcggatgcacgccgactgc
aggacgcagatcaagtgcaaggactgtgggcagatgttcagtactacctcctccctcaac
aagcatcggagattctgcgagggcaagaaccattacacgccgggtggcatcttcacccca
ggcctgcccttgacccccagccccatgatggacaagacaaaaccctccccgaccctcaac
cacgggggtctaggcttcagcgagttcttcccctccagacctcatcctgggagcctgccc
ttctcggctgcccctccggccttccccgcactcactccaggcttcccgggcatctttcct
ccatccctgtacccacgaccacctctgctacctcccacgccactgctcaagagccccctg
aaccatgcgcaggacgccaagctacccagcccgctgggaaacccagccctgcccctcgtc
tccgcggtcagcaatagcagccagggcgccacagcggccaccgggccagaggagaaattc
gatggccgcttggaagacacgtatgcggagaaggtgaaaaacaggagccctgacatgtca
gatggcagtgactttgaggatatcaacaccacgacggggacagacttggacaccaccacg
ggcacagggtcggacctggacagcgacctggacagtgacagagacaaaggcaaggataag
gggaagccagcggagagcaaacctgagtttgggggtgcatcggtgccccccggggccatg
aacagtgtggccgaggtaccaggcttctactcacagcattccttcttcccgccacccgag
gaacagctgctgacggcctcgggagccgccggcgactccatcaaggccatcgcgtccatc
gcagagaaatactttggtcccggtttcatgagcatgcaggagaagaagttgggctcacta
ccctaccactccgtgttccccttccagttcctgcctaacttcccccactccctctacccc
tttacggaccgagccctcgcccacaacttgctggtcaaggctgagccaaagtcaccccgg
gatgccctcaaggtgggcggccccagtgcggagtgcccctttgacctcaccaccaaacca
aaagaggccaaacccgccctgctcgcacccaaggtccccctcgtcccctcatctggcgag
gaacagccgctggacctgagcatcggcagcagagccagggcgagccagaacggaggcagc
cgtgaaccgcggaagaaccacatctacggtgaacggaagccgggggtcggcgaggggctg
cctaaggtgtgcccagcacagttgccccagcagccctccctgcattacgctaagccttca
ccgttcttcatggatcccatctacagcagggtagaaaagcggaaggtggcagaccctgtg
ggagtcctgaaagagaagtacctgaggccgtccccacttctgttccacccccagatgtca
gccatagaaaccatgacggagaagctggagagctttgcagccatgaaggccgactcaggc
agctccctgcagcccctgcctcaccaccccttcaacttccgctccccacccccaacgctc
tcggatcccatcctcaggaaggggaaggagagatacacgtgcaggtactgtggcaagatc
ttccccagatctgcaaatctcacaagacatctgaggacacacacgggggaacagccatac
aggtgcaagtactgtgaccggtcattcagcatctcctccaacctccagcggcacgtgagg
aacatccacaacaaagagaagccgttcaagtgccatctgtgcaaccgctgcttcgggcag
cagaccaacctagaccggcacctgaagaagcatgaacacgagggtgcaccagtgagccag
cactccggggtgctcacgaaccacctgggcaccagcgcctcctcccccacctccgagtcg
gacaaccatgcacttttagatgagaaggaagattcttacttctccgagatccgaaacttc
atcgccaacagcgagatgaaccaggcgtccactcgaatggacaaacggtctgagatccaa
gacctggacagcaacccaccatgtccaggctcagccagtgcaaagcaggaggacgtagag
gaggaggaagaggaggagctggaggaagaggatgatgacagcttagccgggaagtcacag
gaggacacggtgtcccccacacctgagccccaaggagtctatgaagatgaagaggatgag
gaaccacccagcctgaccatgggctttgaccatacccggaggtgtgttgaggagcgagga
ggcggcctgttagctttggagccgacgccgacctttgggaaggggctggatctccgcaga
gcagctgaggaagcatttgaagttaaagatgtgcttaattccaccttagattctgaggtt
ttaaaacaaaccctgtacaggcaggctaagaaccagagctcactggatgcttggttgaac
atcacaggaccctcgtcagagtccggagcctttaaccccatcaaccacctctga
DBGET
integrated database retrieval system
