Mus pahari (shrew mouse): 110323330
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Entry
110323330 CDS
T05929
Symbol
Zbtb40
Name
(RefSeq) zinc finger and BTB domain-containing protein 40 isoform X1
KO
K10512
zinc finger and BTB domain-containing protein 40
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110323330 (Zbtb40)
04121 Ubiquitin system [BR:
mpah04121
]
110323330 (Zbtb40)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
110323330 (Zbtb40)
Ubiquitin system [BR:
mpah04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
110323330 (Zbtb40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
zf-met
XAF1_C
zf-C2HC_2
zf-C2H2_11
MCR_C
zf-C2H2_6
KLHL33-like_BTB_POZ
Motif
Other DBs
NCBI-GeneID:
110323330
NCBI-ProteinID:
XP_021056150
Ensembl:
MGP_PahariEiJ_G0029005
LinkDB
All DBs
Position
6:complement(87928942..88000542)
Genome browser
AA seq
1229 aa
AA seq
DB search
MELPNYSQQLLLQLYALCKEQRLCDCTISVGNIYFRAHKPVLAAASLLFKTLLDSTDAIS
IDASVVSPEEFALLLEMTYTGKLPVGKHNFSKIISLADSLQMFDVAVSCKNLLTNLVNCS
VQGQVVRDVSVLSPEAGSKESEKPQVEILSCEGAGEPSSPEVSAMPVGPEKAKIQDVIHI
ATQEINADPPIAQEVQVAAEITGATPHTAEVCSPSPVGQIPSETKEGNTEAECETKQDQL
TLLLEHESVFSDAALLTPDTLRRLAGCSEIEGPQKETIMECLTGEGGGSAFQRILDKVHN
GSLDVQVALSLVRLYQESTPAEKVSQIQPEGSAGEGKTLSVLLLEHKEDLIQCVTQLRPI
VEFLETAKEEFLPDSEKRVIQSCCEGRTPKETIENLLHRVTEEKTLPAKSLVKLLQAVRT
AFPNLGLLLDNLQKGAGSPGTTASPNPDAYGAELLRKYHENLSEILIDNQVLLKVISRMK
GLAPGDREVMQTLLKQDSGSGGFSSLMLAALERQTLAATAIWQLLLAAQETETRPLNLLL
EEVGREAGAGAFFRAVTAPESTVLEAILRHSKLLREAIQQTAGRERLSSEEEHLAETVQE
MLSISSETVSPEASLRAVLSRAVEKSVSASVVCHLLCSVHKSFPGLQPLMQELAHVGFLT
KESGEERWKVADGLHPGAKDNAEEVAKAAGEDCQAMEQKEQGEPGPVPEQQEKDTSASLD
PAKKSFICKACDKSFHFYCRLKVHMKRCRVAKSRQVQSEEGSETRGLEKGLEKQQPDACG
TGGEPDAPKKKKKRLPVTCDLCGREFAHASGMQYHKLTEHFDEKPFSCEECGAKFAANST
LKNHLRLHTGDRPFMCKHCLMTFTQASALAYHTKKKHSEGKMYACQYCDAVFAQSIELSR
HVRTHTGDKPYVCRDCGKGFRQANGLSIHLHTFHNIEDPYDCKKCRMSFSTLQDHRKHIH
EVHSKEYHPCPTCGKIFSAPSMLERHMVTHVGGKPFSCGICNKAYQQLSGLWYHNRTHHP
DVFAAQNHRSPKFSSLQCSSCDKTFSNTVEHKKHIKTEHADLKFHECDQCKELFPTPALL
QVHVKCQHSGSQPFRCLYCAATFRFPGALQHHVTTEHFKQSESTFPCELCGELFTSQAQL
DGHLESEHPKVAGTETQAAASRMVQVIQAPEPVAPAEQVITLEETQLAGSQVFVTLPDSQ
TSQNSSELVAVTVEDLLDGTVTLICGEAK
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atggagctccccaactacagccagcagctgcttctgcagctctacgccctgtgcaaggag
cagcggctctgcgattgcaccatttctgtcggcaacatctacttcagagcccacaagcca
gtcctggcagcggccagcctcctgttcaaaaccctgctggacagcacagacgccatctcc
atcgatgcatcggtggtgagccctgaagagtttgccctcttgctagaaatgacatacacc
ggcaagctacctgtgggcaagcataacttctccaagatcatctccttagcagatagcctg
cagatgtttgacgtggctgttagttgtaaaaatcttctgaccaaccttgtaaactgctct
gtccaggggcaggtggtaagggatgtctcagtgctgtccccagaggcaggtagcaaggag
tcagagaagcctcaagtagaaatcctttcctgtgaaggtgctggggagccctcttccccg
gaagtttctgccatgccagtgggccctgagaaagccaagatccaggacgtaatccacata
gctacccaagagataaatgcagaccctcccattgcccaagaggttcaggtggctgcagag
atcacaggggcaactcctcacacagctgaagtttgttccccttcccctgttggacagatc
ccaagtgagacaaaggaaggcaatacagaagcagagtgcgagacaaagcaggaccaactg
actctcctgctggagcatgaaagtgtcttctcagatgcagccttgctcaccccagacacc
ctgagaagactggcaggatgctcagagatagaagggcctcagaaggagaccataatggaa
tgtctcacgggtgaaggaggaggctcagcgttccagagaattctggacaaagtgcacaat
gggagcctggatgtgcaggtggccctgtctctggtgagactataccaggagtctacgcct
gcagagaaagtgtctcagattcagccagaagggagcgcaggagagggaaagaccttgtct
gttctgttactggaacacaaagaggacctgatccagtgtgtaacacagctcagacctatt
gtggagttcctggaaacagccaaggaggaattcctgccagattccgaaaaaagggtgatt
cagagctgctgtgagggcagaacacccaaggagacgatagagaatttgttgcacagagtg
actgaggagaagaccctgcctgccaagagtctggtaaaactcctccaggctgtgaggaca
gccttcccgaacctgggcctcctgctggacaatttgcagaaaggagcgggatcacccggc
accacagcctcccctaaccctgatgcttatggagccgagctgttgagaaagtaccatgaa
aacctgtctgagattctcatagacaaccaggtgctgctgaaggtgatctcacggatgaaa
ggcttagcccctggagacagagaggtcatgcagaccctcctgaaacaggactctggctca
ggtggcttcagttccctgatgttagcagctctggaaaggcagactctcgctgcaacagcc
atttggcaactactgctagcggctcaagagactgagacccgcccactgaacctgctcttg
gaggaagtaggaagggaggctggcgctggggctttcttccgggcagtgaccgccccagaa
agcacggtattggaagccatcctgaggcacagcaagctgctccgggaagccatccagcag
acggcggggcgtgagcgcctttcttcagaggaagaacacctggcagagaccgtgcaagag
atgctgagcatatcctctgagacagtgagccctgaagcctccctgagagcggtgctgagc
agagctgtggagaaatctgtctcggcctctgtggtctgtcacctcctctgcagtgtccac
aagtctttccccggcctgcagcccctcatgcaggagttggcacatgttggtttcctcacc
aaggaaagtggagaggagaggtggaaggtggctgatgggcttcaccctggagccaaggac
aacgcggaggaagtggccaaggcagctggagaagactgccaggccatggaacaaaaggag
cagggggagcctgggcccgtgccagagcaacaggagaaagacacttctgcctccctggac
cctgccaagaagagcttcatctgcaaagcctgtgacaagagcttccatttctactgccgt
ctgaaggtgcacatgaagcgctgccgggtggccaagagcaggcaggtgcagagtgaggag
ggcagcgagaccaggggcttggagaaggggctggagaagcagcagccagacgcctgcggc
acaggtggggagcccgatgcccccaagaagaagaagaagcggctgccagtgacatgtgac
ctctgcggaagagagtttgcccatgcctcaggcatgcagtaccacaagctgaccgagcac
ttcgacgagaaacctttctcctgtgaggaatgtggggcaaagtttgcagccaactctacc
ctaaagaaccacctgcgcctgcacaccggggaccggccgttcatgtgcaagcattgcctc
atgaccttcacacaggcctccgccctggcttaccacaccaagaagaagcactcagaaggg
aaaatgtacgcatgtcagtactgtgatgccgtgttcgcccagtcgattgagctgtcccgg
catgtgaggacccataccggagataagccgtatgtctgtagggactgtggaaagggcttc
cggcaagccaacggcctctccatccacctgcacaccttccacaacatagaagatccttat
gattgcaagaaatgcaggatgagcttctccacactgcaggaccaccggaagcacatccat
gaggtgcactccaaggagtaccacccctgccccacgtgtgggaagatcttcagcgcccct
tccatgctggagcggcacatggtgacccacgttggagggaagccctttagctgtgggatc
tgcaacaaggcctatcagcaattgtctggattgtggtaccacaatcggacgcaccaccca
gatgtgtttgctgctcagaaccatcggtcacccaagttctcatcgctgcagtgcagctcc
tgtgacaagaccttttccaataccgtcgaacacaagaagcacatcaaaacagaacatgca
gatctgaagttccatgagtgtgaccagtgtaaggagctcttccccacaccagctctgctc
caggttcacgtcaagtgccagcattcagggtcgcagccattccggtgcttgtactgtgcg
gccaccttccgcttcccgggagccctgcagcaccacgtcaccacggagcacttcaagcag
tcggaaagcaccttcccctgtgagctctgtggcgagctcttcacctcccaggcccagctt
gatggccacttggagtctgagcacccaaaggtggcaggcactgagacccaggcagctgcc
tctcgcatggtgcaggtaatccaagctccagagccagtggccccggccgagcaggtgatc
acgttagaggagacacagcttgctggctcgcaggtgtttgtgaccttgccagattcacag
acctctcagaacagctccgagcttgtggcggtgacagtggaggatttgctggatggtaca
gtcacattgatctgtggtgaggccaagtga
DBGET
integrated database retrieval system
