Mus pahari (shrew mouse): 110323460
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Entry
110323460 CDS
T05929
Name
(RefSeq) calreticulin-like isoform X1
KO
K08057
calreticulin
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04141
Protein processing in endoplasmic reticulum
mpah04145
Phagosome
mpah04148
Efferocytosis
mpah04612
Antigen processing and presentation
mpah05142
Chagas disease
mpah05163
Human cytomegalovirus infection
mpah05166
Human T-cell leukemia virus 1 infection
mpah05168
Herpes simplex virus 1 infection
mpah05169
Epstein-Barr virus infection
mpah05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110323460
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110323460
04148 Efferocytosis
110323460
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
110323460
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
110323460
05170 Human immunodeficiency virus 1 infection
110323460
05168 Herpes simplex virus 1 infection
110323460
05163 Human cytomegalovirus infection
110323460
05169 Epstein-Barr virus infection
110323460
09174 Infectious disease: parasitic
05142 Chagas disease
110323460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
mpah03110
]
110323460
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
mpah04091
]
110323460
Chaperones and folding catalysts [BR:
mpah03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
110323460
Lectins [BR:
mpah04091
]
L-type lectins
110323460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Motif
Other DBs
NCBI-GeneID:
110323460
NCBI-ProteinID:
XP_021056346
Ensembl:
MGP_PahariEiJ_G0028614
LinkDB
All DBs
Position
6:59991027..60050623
Genome browser
AA seq
417 aa
AA seq
DB search
MCWVFFSLSPFSTDGWIKRWVQSKHQSDYGQFQLASGKFYQDKERDKGLQTTEDAKFYAL
SARFKPFSNENETLVVQFSVKHEQGIDCGGGYVKLFPASLNQEDMHSESQYYIMFGPDIC
GFGNNRLQVILSHKGKYHENNKTLKCRINKDTHLYTLILRPNATYEVKIDNQKVTSGGLE
DDWDFLPPKKIKDPYARKPRKWDERQQIEDPEDKKPEDWEDSEFIPDPDAKKPDDWNEAM
DGVWEGPLIPNVKYQGEWKPRIIDNPNYQGEWIHPEIDNPKYRPDSTIGHYHNISVLGLD
LWQVKSGSIFDNFLLTNDEEFAEEVGNMTWGLRKDVEQQWRELYEEMEKQKEAEETKKKR
EKERARQEDVWGLDEEDEEDAEEDDEEEAEERPKQEGSAERASLDQKGVHFDQKDEL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtgttgggtttttttttctctctctcctttctccacagatggatggataaaacggtgg
gtacaatctaaacatcagtcagattacggccaattccagcttgcttcgggaaaattttat
caagataaagagagagataaaggtctccagaccacagaagatgccaagttctacgccctt
tccgccaggtttaagcccttcagcaatgagaatgagaccttggtggttcagttttcagta
aaacacgagcaaggtattgattgcggcggtggctacgtgaaactctttcctgcctcactg
aaccaggaggacatgcactcagaatcccagtattacatcatgttcggcccggacatctgt
ggctttggcaacaacagactacaggtcatcctttctcacaaagggaaataccatgagaac
aacaagaccctcaagtgcaggattaataaagacactcacctgtacactctgatccttcgc
cctaatgctacttatgaggttaaaattgacaaccagaaggtgacaagtggaggactggaa
gatgactgggacttcttgcctcccaagaaaataaaagacccctacgccaggaaaccaagg
aaatgggatgaacgacaacagatagaggatcctgaagataagaaacctgaggactgggag
gactctgaattcatcccagacccggatgccaagaagccagatgactggaatgaggcgatg
gatggagtgtgggaagggcccctgataccaaacgtcaagtaccagggagaatggaaacct
cggatcattgacaatcccaattaccagggggagtggattcacccagagatagacaacccc
aaatacaggcctgactctaccattggtcactatcacaatatcagtgtccttggtctggat
ctttggcaggtgaaatcaggcagcatttttgacaatttccttctaacaaatgatgaagag
tttgctgaagaggttggaaatatgacctggggattaagaaaggatgtggagcagcagtgg
agagagctgtatgaggaaatggagaaacagaaggaggcggaggagaccaagaagaagagg
gaaaaggagagagccaggcaagaggacgtctggggactagatgaggaggatgaggaggac
gctgaagaggatgacgaggaggaagcagaggaaagacccaagcaggaaggcagtgcagag
agggcatctctggaccaaaagggagtccactttgatcagaaggatgaactgtaa
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