Mus pahari (shrew mouse): 110323475
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Entry
110323475 CDS
T05929
Symbol
Zc3h12a
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110323475 (Zc3h12a)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
110323475 (Zc3h12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1
Motif
Other DBs
NCBI-GeneID:
110323475
NCBI-ProteinID:
XP_021056379
Ensembl:
MGP_PahariEiJ_G0028793
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Position
6:complement(76186695..76196755)
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AA seq
596 aa
AA seq
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MSDPSGKKPVQEFKPTMSLWSLEDRHSSQGQPQPDQGPLAKDAPTSELQMKVDFFRKLGY
SSSEIHGVLQKLGVQADTNTVLGELVKHGSATERECQALTAPCPQPPLVPRGGNTPKPST
LEPSLPEEDSEGSDLRPVVIDGSNVAMSHGNKEVFSCRGILLAVNWFLERGHTDITVFVP
SWRKEQPRPDVPITDQHILRELEKKKILVFTPSRRVGGKRVVCYDDRFIVKLAFESDGVV
VSNDTYRDLQGERQEWKRFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPLPSE
HRKQPCPYGKKCTYGIKCRFFHPERPSRPQRSVADELRANALLSPPRTPVKDKSSQRHSP
ASQPSSVSLEAEPGSLDGKKLGTRSSPGPHREGSPKTCAPAGRGLPGSGGSFGPTEWLPH
SQDSLPYISQECLDSGIGSLESQMSELWGVRGGNPGESGPTRGPYAGYHSYGSKVPAAPS
FSPFRPAMGAGHFSVPTDYVPPPPTYPSREYWSEPYPLPPPTPVLQEPQRPSPGAGGGPW
GRVSDLAKERAGVYTKLCGVFPPHLVEAVMSRFPQVLDPQQLAAEILSYKSQHLSE
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacccatctggaaagaaacctgtccaagaattcaagcccaccatgagtctgtgg
agtcttgaggacagacacagcagccagggtcaacctcagccagaccagggccctttggct
aaagacgcccctacttccgagctgcagatgaaagtggactttttccgtaaactggggtac
tcgtcctctgagatccacggtgtcctgcagaagctgggagtccaagcagacaccaacacg
gtgctaggggaactggtgaagcatggctcagctactgaacgagagtgccaggccctcacg
gccccctgcccccagccccctctggtgccccggggtggaaacacccccaagccttccact
ctggaaccctcactcccagaggaggacagtgagggcagcgacctgagacctgtggtcatc
gatggaagcaatgtggccatgagccatgggaacaaggaagtcttctcttgccggggcatt
ctgctggctgtgaactggtttctggagaggggccatacagacattaccgtgtttgtgcca
tcttggaggaaggaacagcctcggccagatgtgcccatcacagaccagcacattctgcga
gaactagagaaaaagaagatcctggtgttcacgccatccaggcgggtcggcggcaagcgc
gtggtgtgctatgatgaccgcttcattgtgaagctggccttcgaatccgacggggtggtg
gtctccaatgacacgtaccgggacctccaaggcgagaggcaggagtggaagcgcttcatc
gaggagcggctgctaatgtactccttcgtcaatgacaagttcatgccccctgacgaccct
ttaggacggcatgggcctagcctggacaacttccttcgtaagaaaccactaccttctgaa
cacaggaagcagccatgcccctatgggaagaagtgtacgtatggaatcaagtgccgattc
ttccaccctgagcggccaagccgtccccagcgctctgtggctgatgagctccgtgccaat
gccctcctttcacctcccaggactccagtcaaggacaaaagtagccagaggcattcccct
gcctctcagcccagctctgtgtccctagaggctgaaccaggcagcctggatgggaaaaag
ctgggtaccaggtcgtccccgggtccccaccgagaaggctcaccgaagacctgtgctcca
gctggcaggggcctccccggtagtgggggcagcttcggtcccacagagtggctcccacac
agccaggactcactcccatacatctcccaggagtgccttgattcaggcatcggctccctg
gagagccagatgtcagaattatggggggtgcgaggaggcaaccctggggagtcgggcccc
actcggggcccctatgctggttatcacagctatgggtccaaggtcccagcagcaccttcc
ttttctccctttagaccagccatgggtgctggccacttcagtgtccccaccgactatgtg
cccccgccacccacctacccatccagagagtactggtctgagccgtacccattgccccca
cccactccagtccttcaggagccccagagacccagcccaggggctggtggaggcccctgg
ggcagggtgagcgacctggccaaggaaagggctggtgtgtataccaagctgtgtggtgtc
ttccccccacacctggtagaagcggtaatgagccgcttcccacaggtgctggatccacag
cagctggccgctgagatcctgtcttacaagtcccagcacctcagtgagtaa
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