Mus pahari (shrew mouse): 110323869
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Entry
110323869 CDS
T05929
Symbol
Mex3b
Name
(RefSeq) RNA-binding protein MEX3B
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110323869 (Mex3b)
04121 Ubiquitin system [BR:
mpah04121
]
110323869 (Mex3b)
Enzymes [BR:
mpah01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110323869 (Mex3b)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110323869 (Mex3b)
Ubiquitin system [BR:
mpah04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110323869 (Mex3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
RING_XB3-XBAT31
zf-C3HC4
KH_2
Prok-RING_4
KH_DEAH11_2nd
zf-RING_5
zf-P11
Motif
Other DBs
NCBI-GeneID:
110323869
NCBI-ProteinID:
XP_021056880
Ensembl:
MGP_PahariEiJ_G0013158
LinkDB
All DBs
Position
1:54361555..54365923
Genome browser
AA seq
576 aa
AA seq
DB search
MPSSLFADLERNGSGGGGGGGGGGGGGGSGGGETLDDQRALQLALDQLSLLGLDSDEGAS
LYDSEPRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVV
TGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQTTIQVRVPYRVVG
LVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIALRTGGII
ELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLG
SASTDSYFGGGTSGSAAATSRLADYSPPSPALSFAHNGNNNNNGNGYTYTAGEASVPSPD
GGPELQPTFDPAPAPPPGTPLLWAQFERSPGGGSAAPVSSSCSSSASSSASSSSVVFPGG
GASSTPSNANLGLLVHRRLHPGTSCPRLSPPLHMATGAGEHHLARRVRSDPGGGGLAYAA
YANGLGTQLPGLPSSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSVCFESEVIAALVPC
GHNLFCMECANRICEKSEPECPVCHTAVTQAIRIFS
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgcccagctcgctgtttgcagacctggagcgcaacggcagcggcggcggcggaggaggc
ggcggcgggggaggcggcggtggcagcggcgggggagagactctggatgaccaaagagcc
ctgcagcttgcgctcgatcagctctccctgttgggactggacagtgatgagggcgcctct
ttgtacgacagcgaaccgcgcaagaagagcgtgaacatgaccgagtgcgtgccggtaccc
agttccgaacacgtcgcggagatcgtagggcggcaaggttgtaaaatcaaagctttgagg
gcgaagaccaacacttacatcaagaccccagttcgcggggaggagcctgtctttgttgtg
acgggcaggaaggaggatgtggctatggctcggagggagatcatctctgccgcagagcac
ttctccatgatccgagcctctcgtaacaagaacacggctctcaacggcgctgtgcccgga
ccgcccaacctgccgggacagaccactatccaagtgagggtgccataccgcgtggtaggg
ctcgtggtggggccaaagggcgccacgatcaagcgcattcaacagcagacacatacttat
attgtgacacccagccgagacaaggagccggttttcgaggtgaccggcatgccagagaac
gtggatcgcgctagagaggagatcgaagctcacatcgcgctgcgcaccggtggcatcatc
gagctgacagacgagaacgacttccatgccaatggcacagacgtgggctttgatctgcat
cacgggtccggcgggtccgggccgggcagcctctggagcaagcccaccccaagcatcact
cctacacctggccgcaagcccttctccagctatcgcaacgacagctccagctcgcttggc
agtgcatccacagactcttacttcggtggtgggactagcggcagcgcagctgctacttca
cgcctggcggactatagccctcccagccctgcactcagctttgctcacaatgggaacaac
aacaataacggcaatggttacacctacacagcgggggaagcctcagtaccttccccggat
gggggtcctgagctgcagcctactttcgacccagctcccgccccaccacctgggacaccc
cttctatgggcccagttcgagcggtctcctggaggtggatctgcagcaccagtatcctct
tcctgttcttcttccgcatcctcatctgcctcgtcgtcctctgtggtctttcccgggggt
ggcgccagcagcacgccctccaatgccaatctggggctgctggtgcaccgccgactgcac
ccgggcaccagctgcccgcgcctgtctccgcccttgcacatggccacgggggcgggagag
caccaccttgctcgccgcgtgcgcagcgacccgggcggtggaggcctggcctacgctgcc
tatgctaatggactagggacgcagctccctggcctgccctcgtcggacacttcgggctcc
tcctcgtcctctagctcctcctccagctcttcctcctcttcctccgggctgaggcgcaaa
ggcagccgcgactgctctgtgtgcttcgagagtgaagtgatcgccgcgttggtgccctgt
ggccacaacctcttctgcatggagtgtgccaaccgcatttgtgagaagagcgagcccgag
tgtcccgtctgccacacggcggtcactcaggccatccgcattttttcctga
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