Mus pahari (shrew mouse): 110324091
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Entry
110324091 CDS
T05929
Symbol
Atg2b
Name
(RefSeq) autophagy-related protein 2 homolog B
KO
K17906
autophagy-related protein 2
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04136
Autophagy - other
mpah04140
Autophagy - animal
mpah05010
Alzheimer disease
mpah05014
Amyotrophic lateral sclerosis
mpah05016
Huntington disease
mpah05017
Spinocerebellar ataxia
mpah05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110324091 (Atg2b)
04136 Autophagy - other
110324091 (Atg2b)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
110324091 (Atg2b)
05014 Amyotrophic lateral sclerosis
110324091 (Atg2b)
05016 Huntington disease
110324091 (Atg2b)
05017 Spinocerebellar ataxia
110324091 (Atg2b)
05022 Pathways of neurodegeneration - multiple diseases
110324091 (Atg2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110324091 (Atg2b)
03029 Mitochondrial biogenesis [BR:
mpah03029
]
110324091 (Atg2b)
Membrane trafficking [BR:
mpah04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
110324091 (Atg2b)
Mitochondrial biogenesis [BR:
mpah03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
110324091 (Atg2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
110324091
NCBI-ProteinID:
XP_021057098
Ensembl:
MGP_PahariEiJ_G0029848
LinkDB
All DBs
Position
7:complement(99658915..99727498)
Genome browser
AA seq
2037 aa
AA seq
DB search
MPWPFSESIKKRACRYLLQRYLGHFLQEKLSLEQLSLDLYQGTGSLAQVPLDKWCLNEIL
ESADAPLEVTEGFIQSISLSVPWGSLLQDNCALEVRGLEMVFRPRPRVATGSEPMCWSSF
MTSSMQLAKECLSQRLTDEQGEASQPFEGLEKFAETIETVLRRVKVTFIDTVLRIEHVPE
NSKTGAALEIRVDRAQRCSLKYALIPYRTETEPKLSPSWNPKIVYEPHPQLTRTLPEIAP
SDPVQIGRLLGRLELSLTLKQNEVLPGAKLDVDGQIDSFHLFLSPRQVHLLLDMLAAIAG
PENSSKIGLANKDRKNRPMQQEDEYRIQMELNRYYLRKDSLSMGVSSEKSFYETETARTP
SSREEEVFFSMADMDMSHSLSSLPPLGDPPHMDLELSLTSTYTNTPAGSPLSATVLQPTW
GEFADHKEQPVRGPAFQSDVVHPASLQKAALSSRSVSVDESRPEFICRLALGIFSVSVLH
IDPLSPAETSLNVNPLTRMAIDFFSCIEKMDLAIFSTGDFKSFRAVFAEACSHDHLRFIG
TGIKVSYEQRQRSASRHFSTDMSVGQMEFLECLFPTDYHSVPPHYTELLTFHSKEGTDAH
LPVCLQLHYKHSETRGPQGNQARLSSVPQKAELQIKLNPVCCELDISIVDRLNSLLQPQK
LTTVEMMASHMYASYNKHISLHKAFTEVFLDDSHSPANRRVSVQVAAPALHLSVRFPIPD
LRSDQERGPWFKKSLQKETLHLEFTDLESKTEFVGGSTPEQTKLELTFRELSGSFQEEKG
GPSVKFFHVSGGVDGDTTSSDDFDWPRMVLKINPPAMHSILERIAAEEEEENDGHYQEEE
DGGAHSLKDVCDLRRPAPSPFSSRRVMFENEQMVMPGDPVEMTEFQDKAISNSHYVLELL
LPNIHLTLPNKSFYEKLYNRIFNDLLLWEPTAPSPVETLENVSYGIGLSVASQLINTFSK
DSFSPFKSAVHYDEDSGSEEETLQYFSAVDPNYRSRRKKKLDSQNKNSQSFLSVLLSINH
GLMAVFTDVKQENGDPMESKHGEFWLEFNSGSFFCVTKYEGFDDKHYICLHSSSLRLYHK
GIVDGAILPTETRLPCSTRPHWLEPTIYSSEEDGLSRPASDGVGGDNLNMLSVAVKILSD
KSESNTKEFLVAVGLKGATLQHRVLPAGLSWHEQILNFLNIADEPVLGYNPPTSFTTFHV
HLWSCALDYRPLHLPIRSLLTVETFSISSSVALDKSSSTLRIIMDEAALHLSDKCNTVTV
NLSRDYVRVMDMGLLELTITAVKSDSDGEQTEPRFELHCSSDVMHIRTCSDSCAALMNLI
QYVASYGDLHVPHKAEMKPGVPQRKPKVDSSARSSSHGPVLPEEDQQILRDLMSDAMEEV
DLQQASAPVGPQANGVLDEKSHTQEPCCSDLFLFPDESGNVSQESSPAYPSLTHHLISDA
VTGVTAENDDFCILFAPKAAVQEKEEEPVIKIMVDDAIVIKDDYFSLPITRTDSSKAPLH
FPIPAIRYVVKEVSLVWHLYGGKDFATAPPTSPAKSYISPHSSPSQTPTRHGRHTVCGGK
GRNQDFLMEIQLSKVKFQHEVYPPCKPECESSLLEHPVSRQVFIVQDLEIRDRLATSQMN
KFLYLYCSKDMPRKAHSNMLTIKALHVRPESGRSPQECCLRVSLMPLRLNIDQDALFFLK
DFFTSLSTEVELLLTADPEVTKSPGADVTCSLPRHLSTSKEPNLVVSFPGPKQASPNHRA
NSVEGGNGLEEDVSAEETSFSDQPVFFREFRFTAEVPIRLDYHGKHVSMDQGTLAGILIG
LAQLNCSELKLKRLFYRHGLLGIDKLFSYAISEWLSDIKKNQLPGILGGVGPMHSLVQLV
QGLKDLVWLPIEQYRKDGRIVRGFQRGAASFGTSTAMAALELTNRMVQTIQAAAETAYDM
VSPSTLSIEPKKAKRFPHHRLAHQPVDLREGVAKAYSVVKEGITDTAQTIYETAAREHES
RGVTGAVGEVLRQIPPAVVRPLIVATEATSNVLGGMRNQIRPDVRQDESQKWRHGED
NT seq
6114 nt
NT seq
+upstream
nt +downstream
nt
atgccttggccattttcagaatccatcaagaagagggcctgtcgctacctcctgcagagg
tacctgggccacttcctgcaggagaagttgagcctggagcagctgagcctggacttgtac
cagggcaccgggtcccttgctcaggtccccttggacaaatggtgtctcaatgaaatcctc
gagtcagcagacgcaccgttagaagtcaccgaaggatttattcagtccatttccctgtct
gtcccatggggctccttgctgcaggacaactgtgccctggaagtgagaggactggagatg
gtcttccggcctcgaccgagagtagcgactgggtccgagcctatgtgctggtcaagcttc
atgaccagtagcatgcagctggcaaaggagtgtcttagccagagactgacagacgagcaa
ggagaggcatcccagcctttcgaaggactggaaaagtttgcagagaccatcgagacagtc
ctaagaagagtgaaagtcacttttatagatactgttttaagaattgaacatgtgccagaa
aattctaaaactggagctgcacttgaaatccgagtagacagagcccagcgctgctctcta
aagtatgctctcatcccatacagaactgaaactgagccaaagctgtcacctagctggaac
cccaaaattgtttatgagccacacccacaactaactagaacgttaccggagatagcaccc
tcggatccagtgcagattggaaggctgctgggcaggctggagctgagtctcactttaaag
cagaatgaagtgcttccaggagccaagttggatgtcgatggacagatagactcctttcat
ctattcctgtcaccaaggcaggtacacctccttctggatatgttagcagctattgctgga
ccagaaaattctagcaaaatagggctggctaataaagacaggaaaaatcgacccatgcag
caggaagatgagtaccgaattcagatggaattaaaccggtattatctgaggaaagattcc
ctctctatgggtgtgtcttcagagaagagcttctatgagacagaaacggctcgtacacct
tctagccgtgaggaagaagttttcttctccatggccgacatggacatgtctcacagcctg
tcctctcttccaccccttggggacccaccacacatggacctggagctgtcgttgacgagt
acatacaccaacacacctgcaggatctccgctcagtgctactgtgcttcagccaacttgg
ggagagtttgccgaccacaaagaacagccagtcagagggccagcattccagtctgacgtg
gtccacccagcatctttacaaaaagctgctctctcctctaggtctgtttcagtggatgaa
tccagacctgagtttatctgcaggttggctctcggcatattctccgtctctgtgcttcac
atcgatcctttgtctccagcggaaacatctctgaacgtcaacccattgacacgcatggcc
atcgacttcttctcctgtatagaaaagatggacctagcaatattttcgacaggagacttt
aagtctttccgagcagtctttgccgaagcttgttcacacgatcaccttagatttataggt
actggcatcaaagtgtcctatgagcagagacaaaggtcagcttcccggcactttagcacg
gacatgtccgttggacaaatggagtttttggagtgtctgtttccaacagattatcattct
gttcctcctcactacacagagcttctaacgttccattccaaagaagggactgatgcccac
cttcccgtgtgtcttcagcttcactacaaacattctgagactagaggaccccagggtaat
caagcaagacttagttcagttcctcaaaaggcagaattacaaattaaattaaaccctgtg
tgttgcgagctggatatcagtattgtggataggttaaattccttgcttcaacctcagaaa
ctcactacagtggagatgatggcctcacacatgtatgcgtcctataacaagcatattagt
ttgcacaaggctttcacggaagtgttcctagatgactcgcacagccctgcaaaccgtcgg
gtgtccgtacaagtggccgccccagcactacacctgtctgttcgcttccctattcctgat
ctccgatcagaccaggaaagagggccctggtttaagaagtcacttcagaaagagactctt
catttagaatttacagatctggagtccaagacagagttcgtgggaggatccaccccagaa
caaactaaactggaactgacttttcgagagctatctgggtcattccaggaggagaaggga
gggccgtctgtcaagttcttccatgtgtctggtggagtagatggagacaccacatcgtca
gatgactttgactggccgcgaatggtactgaaaataaacccaccagccatgcattccatt
ttggagagaatagcagctgaagaagaggaagagaatgatggtcactaccaggaggaggag
gacggaggcgctcattccctgaaagatgtctgcgacctgagacggccagccccatctccc
ttttcctctcgtcgagtgatgtttgagaatgagcagatggtgatgccgggagaccctgtg
gagatgacagaatttcaggataaagccatcagcaactcgcactatgtgctggagctcctg
ctacccaacatccacctgacactgcccaacaaaagcttctacgagaagctctataacagg
atctttaatgacttgcttctctgggagccaacagctccttcaccagtggagacacttgaa
aacgtttcctatggcattggactctccgtggccagccagctgataaacaccttcagcaaa
gatagcttcagtccctttaaatctgcagttcactatgatgaagacagtggatctgaagaa
gagactttgcagtatttttctgctgttgatcccaactatcgttcccgtaggaaaaaaaag
ttggactctcagaacaagaactctcagagcttcctctcagtgcttctgagtatcaatcat
ggattaatggcagtgttcactgatgtaaagcaagagaatggcgatccgatggaaagtaag
catggagaattctggttagaattcaatagcggctcgttcttctgtgtgacgaagtatgag
ggctttgatgacaagcactatatctgcttacattccagcagcctcaggctgtaccacaaa
ggcatagtagatggagccattctccctacagagacgcgcttgccctgttccacccgccca
cactggctggaacctacaatttattcctctgaagaggatggcctcagcagacctgcctca
gatggggttggaggagacaatttgaatatgctctcagtcgcagtgaagatactgtctgat
aagtccgagtccaacacgaaggagttcctcgtggctgtggggctgaaaggagccactcta
cagcacagggtgctgcccgccggactcagttggcacgagcagattttaaacttcttgaat
attgctgatgaacctgttttgggatataaccctccaacttcatttacaactttccatgtc
catctttggagctgtgcacttgattataggccccttcacctgccaatccgatcccttctt
actgttgagacgttcagcatttctagcagtgttgccttggataaatcttcctctactctc
agaatcatcatggatgaggctgccttacatctgtcggacaagtgcaacactgtcactgta
aacctgagtagagattatgttcgtgtgatggacatgggacttttagagctgaccataact
gcagtaaaatctgattctgatggagaacagactgagccccgctttgagttgcactgttcc
agtgacgtcatgcacatcagaacatgctcagactcgtgtgccgcactgatgaatctcatt
cagtatgtcgcaagttacggggacctacatgtgcctcacaaagcagagatgaagcctgga
gtcccacagagaaagcccaaggtagattccagtgctcggtcatcttcacatggtccagtg
cttcctgaagaggatcagcagattttacgggacctgatgagtgatgccatggaggaggtt
gatctgcagcaggcctctgcccctgtcggaccacaggctaatggtgtcctggatgaaaag
tctcacactcaggagccgtgctgctcagacctcttcctgttcccagacgagagtggaaat
gtgtcccaggagtccagccctgcctatccatcgctcactcaccacttgatcagtgacgcg
gtgactggtgtgaccgctgaaaacgatgacttctgtattctttttgcaccaaaagcagct
gtccaggagaaggaagaagagccagtgataaagatcatggttgatgatgccattgtgata
aaagatgactatttcagtctgcccatcacgaggacggacagcagcaaagcgccactccac
tttcccatccctgccatccgatatgttgttaaagaggtctctctggtgtggcatctttat
ggaggcaaggactttgcaacagcccctccaacttctccagctaagagttacattagtccc
cacagctcaccttctcaaacacctacaaggcatggacgccacacagtctgtgggggcaaa
ggaaggaaccaggacttcttaatggaaatacagttaagcaaggtgaagtttcagcatgag
gtctaccctccttgtaagcccgagtgtgagtccagcctcttagaacacccagtctccagg
caggtcttcatcgtgcaggaccttgaaattcgagaccggctggcaacatcacagatgaac
aagtttttatacctgtattgcagcaaagacatgcctcgtaaagcccactccaacatgctg
acaattaaagcattgcacgtacgtccggagtctggcaggtcaccacaggagtgctgcttg
agagtgtccctgatgcctcttcgcctcaatattgaccaggacgccttgttcttcctcaag
gatttcttcacaagtctttctacagaagtggagcttctgctgacggcagatccagaagtt
acaaagtctcctggagctgatgtcacctgcagtttgccaaggcacttgagtacctcaaag
gagccaaatctagttgtttcttttcctgggccaaaacaagcttccccaaaccatcgtgcc
aattcagtggagggcggtaatggactggaggaggacgtctcggccgaggaaacttcattt
agtgaccagcctgtgttttttagagaattcaggttcacggcagaagttcccatccggctg
gactaccacggcaagcacgtgtcgatggatcagggtacattggctgggattttgattggc
ctggcccagttgaactgttcggagctaaagctgaaaaggcttttctatcggcatggtttg
ctaggtattgacaaattgttctcatatgcaatctcggaatggctcagtgacattaagaag
aaccagctaccaggaatcctgggaggtgttggccctatgcattcactagttcaattagtg
caaggcctgaaggacttagtgtggctgcccattgagcagtaccggaaggacggccgcatc
gtcaggggcttccagagaggcgctgcttcctttggtacctcaactgcaatggctgcccta
gaactcacaaacagaatggtccagaccatacaggcagccgcagagactgcgtatgacatg
gtatctccgagtacactttccattgagcccaagaaggcaaagagatttcctcatcaccgg
ttagcccaccagccagtagacctgagggaaggtgtggccaaggcctacagcgttgtaaaa
gagggaatcacagacacagctcagaccatctatgaaacggcggctcgagaacacgagagc
agaggggtcactggtgctgtgggtgaagtcctgcggcagatcccaccggcagtggtcaga
cccctgattgtagccaccgaggcaacatcaaatgtgttaggtggcatgagaaaccaaatt
agaccagacgttcggcaggacgagtcacagaaatggcgccacggggaggactga
DBGET
integrated database retrieval system
