Mus pahari (shrew mouse): 110324196
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Entry
110324196 CDS
T05929
Symbol
Psma6
Name
(RefSeq) proteasome subunit alpha type-6 isoform X1
KO
K02730
20S proteasome subunit alpha 1 [EC:
3.4.25.1
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03050
Proteasome
mpah05010
Alzheimer disease
mpah05012
Parkinson disease
mpah05014
Amyotrophic lateral sclerosis
mpah05016
Huntington disease
mpah05017
Spinocerebellar ataxia
mpah05020
Prion disease
mpah05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
110324196 (Psma6)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
110324196 (Psma6)
05012 Parkinson disease
110324196 (Psma6)
05014 Amyotrophic lateral sclerosis
110324196 (Psma6)
05016 Huntington disease
110324196 (Psma6)
05017 Spinocerebellar ataxia
110324196 (Psma6)
05020 Prion disease
110324196 (Psma6)
05022 Pathways of neurodegeneration - multiple diseases
110324196 (Psma6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mpah01002
]
110324196 (Psma6)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mpah03051
]
110324196 (Psma6)
Enzymes [BR:
mpah01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
110324196 (Psma6)
Peptidases and inhibitors [BR:
mpah01002
]
Threonine peptidases
Family T1: proteasome family
110324196 (Psma6)
Proteasome [BR:
mpah03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
110324196 (Psma6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
AMIN-like
Ribophorin_II
Motif
Other DBs
NCBI-GeneID:
110324196
NCBI-ProteinID:
XP_021057209
Ensembl:
MGP_PahariEiJ_G0029515
LinkDB
All DBs
Position
7:52226263..52244345
Genome browser
AA seq
246 aa
AA seq
DB search
MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL
LDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD
ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE
KKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLV
ALAERD
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggggttccagcgccggttttgaccgtcacattactatcttctctcccgagggc
cggctctaccaagtagaatatgcttttaaggctattaaccagggtggacttacatctgtt
gctgtcagaggaaaggactgcgcagttattgtcacacagaagaaagtacccgacaaacta
ctggattccagcacagtgactcacttgttcaagataacggaaaacattggctgtgtgatg
accggaatgacagctgacagcagatcccaggtacagagggcacgctatgaggcagctaat
tggaaatacaaatatggctatgagattcctgtggacatgctgtgtaaaagaattgctgat
atttctcaagtctacacacagaatgctgaaatgaggccacttgggtgttgtatgatttta
atcggtatcgatgaagaacaaggccctcaagtgtacaagtgtgaccctgcaggttactac
tgtggctttaaagccacggcagcaggagttaaacaaacagagtcaaccagcttccttgaa
aaaaaagtgaagaagaaattcgattggacatttgaacagacagtggaaactgcaattaca
tgcctgtctactgttctgtcgattgatttcaaaccttcagaaatagaagttggagtagtt
acagttgaaaatcctaaattcaggattcttactgaagcagagattgacgctcaccttgtt
gctctagcagagagagactga
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