Mus pahari (shrew mouse): 110324247
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Entry
110324247 CDS
T05929
Symbol
Snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mpah04990
]
110324247 (Snx13)
Domain-containing proteins not elsewhere classified [BR:
mpah04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
110324247 (Snx13)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Motif
Other DBs
NCBI-GeneID:
110324247
NCBI-ProteinID:
XP_021057309
Ensembl:
MGP_PahariEiJ_G0029457
LinkDB
All DBs
Position
7:33425882..33521645
Genome browser
AA seq
969 aa
AA seq
DB search
MMLTEASLSIWGWGSLGVVLFLITFGPFVIFYLAFYILCFVGGGLVVTLLYGKTNSEKYL
EQCEHSFLPPTSSGVPKCLEEMKREARTIKIDRRLTGANIIDEPLQQVIQFSLRDYVQYW
YYTLSDDESFLLEIRQTLQNALIQFATRSKEIDWQPYFTTRIVDDFGTHLRVFRKAQQRV
TEKDDQVKGTAEDLVETFFEVEVEMEKDVCRDLVCTSPKDEEGFLRDLCEVLLYLLLPPG
DFQSKIMRYFVREILARGILLPLINQLSDPDYINQYVIWMIRDSNCNYEAFMNIIKLSDN
IGELEAVRDKAAEELQYLRSLDTAGDDINTIKNQINSLLFVKKVCDSRIQRLQSGKEINT
VKLAANFGKLCTVPLDSILVDNVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEV
LSGRQRDGKQQTNQTKGLLRAAAVGIYEQYLSEKASPRVIVDDYLVAKLADTLNHEDPTP
EIFDDIQRKVYELMLRDERFYPSFRQNALYVRMLAELDMLKDPSFRGSDDGDGESFNGSP
TGSINLSLDDLSSVTSDDSVQLHAYISDTVYADYDPYAVAGVCNDHGKTYALYAITVHRR
NLNTEEMWKTYRRYSDFHDFHMRITEQFENLSSILKLPGKKTFNNMDRDFLEKRKKDLNA
YLQLLLTPEMMKASPALAHCVYDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVK
SLPDSLAEGVTKMSDNVGRMSERLGQDIKQSFFKVPPLITKTDSDPEHCRVSAQLDDNVD
DNIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPE
QVADSVKRFRDAFWPNGILAETVPCRDKAIRMRTRIAGKTKLFAIMPDELKHIIGAETTR
KGILRVFEMFQHNQLNRRMVYVFLEGFLETLFPQYKFRELFNKLHSRSKQMQKYKQKLQS
TQAPSLQKR
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgatgttaacagaggccagtctgtccatatggggatggggaagccttggcgttgtcctt
ttcctaataaccttcggaccctttgtaatattttatttggcattttatatcctctgcttt
gtgggagggggtttagtggttactcttctgtatgggaaaactaactcagaaaaataccta
gaacagtgtgaacactcatttcttcctccaacatcatctggggttcctaagtgcttagaa
gaaatgaaacgcgaagccaggactataaagattgacagaagattgacgggtgccaatata
attgatgagcctctccagcaagttatccagttttccttgagggattatgtccagtactgg
tattatacattaagcgatgatgagtcatttcttcttgaaattaggcaaactcttcaaaat
gcgctcattcagtttgctactaggtcaaaagaaatagactggcagccttattttactaca
cgcattgtagatgattttggcactcacctacgagtattcagaaaggcccaacagagagta
acagagaaagatgatcaagtaaaaggtacagcagaggatctggtagaaaccttttttgaa
gttgaagttgaaatggagaaggatgtttgccgggatctagtgtgcacttctcccaaagat
gaagaaggattcctaagggatttgtgtgaggttttattatatttattgctacctcctgga
gatttccagagcaagatcatgcgatactttgtcagggaaatccttgcacgaggaattctt
cttccattaataaatcaactcagtgatcctgattatattaatcaatatgtcatatggatg
atccgtgattcaaattgcaactatgaggcctttatgaacattattaaattaagtgacaat
attggagagttagaggcagtcagagataaggcagcagaagagctccagtatctcagatcc
ttagatacagccggtgatgatattaatactatcaaaaatcaaataaatagcttattattt
gtaaagaaagtatgtgattcaagaatacagcggttacagtcaggcaaagaaatcaatact
gtgaagctagcagcaaactttgggaaactttgtacagtccccttggacagcattcttgta
gacaatgttgcactacaattttttatggattatatgcagcaaactggaggccaagcacat
ctcttcttctggatgacagtggaagggtaccgggttacagcccagcaacagctcgaggtt
ctctcaggtcgccagagagatggcaaacagcagaccaaccaaaccaaaggccttttaaga
gcagcagctgttggaatttatgagcagtatttatctgaaaaggcatcaccaagagttatt
gttgatgactatttagttgcaaaattagcagatactttgaatcatgaagatccaactcca
gaaatctttgatgatattcaaagaaaggtatatgaactgatgctacgagatgaaagattt
tatccttcctttaggcagaatgcgctctatgtgcgaatgctggctgagcttgacatgtta
aaagatcctagtttcagaggatcagatgatggggatggagaatcttttaatgggtctcct
acaggaagcataaatttgtctttagatgacctttcaagtgtgacttctgatgattctgta
caacttcatgcctacatttcagacactgtatatgctgactatgacccatatgctgtggca
ggcgtttgtaatgatcatggcaagacatatgcactatatgccatcactgtacaccggcgc
aacctaaacaccgaggagatgtggaaaacctatcggcgttatagtgacttccatgacttc
cacatgagaatcactgagcagtttgaaaatctgtcaagcatattgaagcttcctggtaaa
aagacgtttaacaatatggatagagattttttagaaaagaggaaaaaggatttaaatgcc
tatttgcagttactcttgactcctgaaatgatgaaggcatccccggcgctggctcactgt
gtttatgacttccttgagaacaaagcttacagtaaagggaagggcgattttgctcgaaag
atggacacttttgtaaatccacttcgcaactctatgaggaatgtttcaaatgcagtcaaa
tcccttcctgatagcttggcagaaggagtgacaaaaatgtcggacaacgtgggcagaatg
tcagagagattagggcaagacataaagcagtcattttttaaggtacctcctttaattacg
aagactgattcagatcctgaacattgtcgagtctcagctcagcttgatgataatgtggat
gacaatattccacttagggtaatgctgcttctaatggatgaggtgtttgacttaaaagag
agaaaccagtggttgagaaggaatatcaaaaatttactccagcagcttattagagctaca
tatggtgatactattaacagaaaaatagttgaccatgttgactggatgacctcaccggaa
caagtagctgactcggtgaagcgtttcagagatgcattttggcccaatggcattttagca
gagactgtcccatgcagagataaagctattcgaatgagaacaagaattgcaggaaaaaca
aaattatttgcaattatgccagatgaactgaagcacattattggagcggagacaacacgg
aaaggtattcttcgtgtttttgaaatgtttcagcacaaccagctaaataggagaatggtg
tatgtcttcttagaaggctttttagaaaccttatttccacagtataaatttcgtgaactt
tttaacaaacttcattcaaggtcaaagcaaatgcagaaatataaacaaaaacttcaaagt
actcaagcgccttctttacaaaaaaggtga
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