Mus pahari (shrew mouse): 110324266
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Entry
110324266 CDS
T05929
Symbol
Lrfn5
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mpah04990
]
110324266 (Lrfn5)
Domain-containing proteins not elsewhere classified [BR:
mpah04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
110324266 (Lrfn5)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
LRR_9
Ig_2
Ig_DSCAM-DSCAML_C
fn3
C2-set_3
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
110324266
NCBI-ProteinID:
XP_021057344
Ensembl:
MGP_PahariEiJ_G0029539
LinkDB
All DBs
Position
7:57883844..58190937
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AA seq
746 aa
AA seq
DB search
MEKFLFYLFLIGIAVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLAD
NFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFS
GLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDH
NMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGIISPSTFALSFGGN
PLHCNCELLWLRRLSREDDLETCASPALLTGRYFWSIPEEEFLCEPPLITRHTHEMRVLE
GQRATLRCKARGDPEPAIHWISPEGKLISNATRSLVYDNGTLDILITTVKDTGAFTCIAS
NPAGEATQTVDLHIIKLPHLLNSTNHIHEPDPGSSDISTSTKSGSNASSSNGDTKMSQDK
IVVAEATSSTALLKFNFQRNIPGIRMFQIQYNGTYDDTLVYRMIPPTSKTFLVNNLASGT
MYDLCVLAIYDDGITSLTATRVVGCIQFTTEQDYVRCHFMQSQFLGGTMIIIIGGIIVAS
VLVFIIILMIRYKVCNNNGQHKVTKVSNVYSQTNGAQMQGCSVTLPQSMSKQAMGHEENA
QCCKVASDNAIQSSETCSSQDSSTTTSALPPTWTSSAPVSQKQKRKTGTKPSAEPQSEAV
TNVESQNTNRNNSTALQLASCPPDSVTEGPTSQRAHTKPSKFLTVPAEGARARHRASLSG
GLKDSFHYGNSQLSLKRSMSMNAMWT
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaattccttttttacctgtttctcattggcatagctgtgcgagctcagatctgt
ccaaagcgttgtgtctgtcagattttgtctccaaatcttgcaaccctttgtgccaagaaa
gggcttctatttgttccaccaaacattgacagaagaactgtggagctacgactggcagac
aattttgttacaaatatcaaaaggaaagattttgccaatatgaccagcttggtggacctg
actctatccaggaatacaataagttttattacaccccatgcttttgctgatctacgaaat
ttgagagcactgcatttgaatagcaacagattgactaaaattacaaatgatatgttcagt
gggctttccaatctccaccatttgatattgaacaacaatcagctgactttaatttcttcc
acagccttcgacgatgtttttgcccttgaggagctggacctgtcctataataatctagaa
acgattccctgggatgctgtagagaagatggtgagcttgcacacccttagtttggatcac
aacatgattgacaacattcctaagggtactttctcccacttgcacaagatgactcggcta
gatgtaacatcaaataaactgcaaaagctgcctcctgatcctctctttcagcgagcacag
gtgctggccacctcaggaatcataagcccatcgacttttgcattgagttttggtggaaac
cccttgcattgcaattgtgagttgctgtggctgaggcgactgtcgagagaagacgacctt
gagacgtgtgcttctcctgcacttttaactggtcgttatttttggtcaattcctgaggaa
gagtttttgtgtgagcctccgctcatcactcgtcatacacatgagatgagagtcttggag
ggtcaaagggcaacattgaggtgtaaagctagaggagaccctgaacctgccattcattgg
atttctcctgaagggaagctgatttcaaatgcaacaagatctctggtgtatgataatggg
acacttgacatccttataacaactgtaaaagatacaggagcttttacctgtattgcttcc
aatccggcaggggaagcaacacaaaccgtggatcttcacataattaaactccctcaccta
ctaaacagcaccaatcatatccacgagcctgatcctggttcttcagatatctccacatcc
actaagtcaggttcgaatgctagcagtagtaatggtgatacaaaaatgagtcaagacaaa
atcgtggtggcagaagcaacttcgtcaacagcactacttaaatttaattttcaaagaaat
attcccggaatccgtatgtttcaaatccagtacaatggtacttacgatgacacccttgtt
tacagaatgatacctcctacgagcaaaacatttctggtcaataatctggcatctggaact
atgtatgacttgtgtgtcttggccatatatgacgatggcatcacttccctcactgccaca
agagtcgtgggttgcatccagtttactacggaacaggattatgtccgttgccactttatg
cagtcccagtttttgggtggcaccatgattattatcattggtggaatcattgttgcatcc
gtgttggttttcatcatcatactaatgatccggtataaggtttgtaacaataatgggcaa
cacaaggtcacgaaggttagcaacgtttattctcagactaatggggctcagatgcaaggc
tgcagtgtcacgctgccccagtccatgtccaaacaagccatgggccatgaagagaatgcc
cagtgctgtaaagttgccagtgacaatgcaattcagtcttcagaaacatgttcgagtcag
gactcttctaccactacctctgctttgcctcctacctggacttcaagtgcgcctgtgtct
caaaagcagaaaagaaagactggcacgaagccaagtgctgagccgcagagtgaagctgtc
acaaatgttgagtcccaaaacactaacaggaacaactcaactgccttgcagttagctagc
tgccctcctgattctgttacagaggggcccacatctcaaagagcacataccaagccaagt
aagtttctcactgtgcctgctgagggagctagagccaggcacagggcctccctcagtgga
ggcttaaaggactcttttcactatggtaattcccagctgtctcttaagagaagcatgtct
atgaatgcaatgtggacttag
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