Mus pahari (shrew mouse): 110324290
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Entry
110324290 CDS
T05929
Symbol
Six1
Name
(RefSeq) homeobox protein SIX1
KO
K15614
homeobox protein SIX1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
110324290 (Six1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110324290 (Six1)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
110324290 (Six1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Rrn6_K-rich
Motif
Other DBs
NCBI-GeneID:
110324290
NCBI-ProteinID:
XP_021057387
Ensembl:
MGP_PahariEiJ_G0029598
LinkDB
All DBs
Position
7:complement(68518163..68522496)
Genome browser
AA seq
284 aa
AA seq
DB search
MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENTENNNSSSNKQNQLSPLEGGKPLMSSSEEEFSPPQSPDQNSVLLLQSNMGH
ARSSNYSLPGLTASQPSHGLQAHQHQLQDSLLGPLTSSLVDLGS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgctgccgtcgtttggttttacgcaagagcaagtggcgtgcgtgtgcgaagtt
ctgcagcaaggagggaacctggaacgcctgggcaggttcttgtggtcgttgcccgcctgc
gatcacctgcacaagaacgagagcgtgctcaaggccaaggcggtggtcgccttccaccgc
ggcaacttccgcgagctctacaagatcctggagagccaccagttctcgcctcacaatcac
cccaaactgcagcagctgtggctgaaagcgcactacgtggaggccgagaaacttcgcggc
cgacccctgggtgccgtgggcaaatatcgggtgcgccgaaaattcccgttgccgcggacc
atctgggacggcgaggagaccagctactgctttaaggagaagtctcggggcgtgctgcga
gagtggtacgcgcacaacccctatccttcaccgagggagaaacgggagctggccgaggcc
actggcctcaccaccacccaggtcagcaactggtttaagaaccggaggcaaagagaccgg
gccgccgaggccaaggaaagggagaacaccgaaaacaataattcctcctccaacaagcag
aatcaactctctcctctggaagggggcaagccgctcatgtccagctcagaagaggaattc
tcacctccccaaagtccagaccagaactcggtccttctgctccagagcaatatgggccac
gccaggagctcaaactattctcttccaggcctcacagcctcccagcccagccacggtctg
caagcccatcagcaccagctccaggactctctgctgggcccactaacctccagtctggtg
gacttgggttcctaa
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integrated database retrieval system
