Mus pahari (shrew mouse): 110324317
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Entry
110324317 CDS
T05929
Symbol
Gtf3c2
Name
(RefSeq) general transcription factor 3C polypeptide 2 isoform X1
KO
K15200
general transcription factor 3C polypeptide 2
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpah03021
]
110324317 (Gtf3c2)
Transcription machinery [BR:
mpah03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
110324317 (Gtf3c2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR5
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_2nd
WD40_WDHD1_1st
WD40_Prp19
ASA1
DSE1_N
Beta-prop_VPS8
WDR55
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
110324317
NCBI-ProteinID:
XP_021057438
Ensembl:
MGP_PahariEiJ_G0029299
LinkDB
All DBs
Position
7:1501260..1525765
Genome browser
AA seq
908 aa
AA seq
DB search
MDTCGVGYVALGEADPVGSMIVVDSPGQEELSQLDVKASSETSSVEASIEMSLPPPLPGF
EDSSDKRRLPPDQESLARLEQQDLSSEMSKVSNPRASKPSGRRGGRTARGAKRPQQRKPP
SAPLVPGLLDQSNPLSTPMPKKRSQKAKGDLLLLKLSKGLDQPESPHPKRPPEDFETPSG
ERPRRRAAQVALLYLQELAEELSTALPAPLSGPKSPKVSSPTKPKKTRQASSQGEGDGSA
RDEDFVLQVEGEDEEESEAPSENSSDPEPVAPRSTPRGPAAGKQKPHCRGMAPNGLPNYI
MAPVWKCLHLTKDLREQHHSFWEFAEWIPVAWKWQLLSELEAAPYLPQEEKSPLFSVQRE
GIPEDGTIYRINRFSSITAHPERWDVSFFTGGPLWALDWCPVPEGSAAPQYVALFSSPDM
NETHPLSQLHSGPGLLQLWGLGTLQQESCPGNRAHFVYGIACDSGCIWDLKFCPSGAWEH
PETLRKAPLLPRLGLLALACSDGKVLLFSLPHPEALLAQQPPDAMKPAIYKVQCLATLQV
GSVQASDPSECGQCLSLAWMPTRPHHHLAAGYYNGMVVFWNLPTNSPLQRIRLSDGSLKL
YPFQCFLAHDQAVRTIQWCKANSHFLVSAGSDRKIKFWDLRRPYEPINCIKRFLSTELSW
LLPYNGVTVAQDNCYASYGLCGIHYIDAGYLGFKAYFTAPRKGTVWSLSGSDWLGTVAAG
DISGELIAAILPDMASNPINVKKPAERRFPIYKADLIPYQDSPEDQDYSSTSSETPNPPK
ARTYTETINHHYLLFQDTDLSSFHNLLRREPMLRMQEGEGHSQLCLDRLQLEAIHKVRFS
PNLDSYGWLVSGGQSGLVRIHFVRGLTSPLAHRVQLESRANFNAMFQPSFPTEGPGFSPS
SHCLLPNP
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggatacctgcggggtcggctatgttgccctgggggaggccgaccccgtggggagcatg
attgtggtagactctcctggacaagaagaactaagccagctggatgtcaaggcttcctcg
gaaacgtccagtgtggaggcgtccatcgagatgtcgctcccccctcctttgcctggattt
gaggattcttctgacaagaggaggcttcctccagaccaggaaagcctcgctaggttggag
cagcaagatctttcttcagagatgtcaaaggtctcaaaccctagagcctcaaagccttcc
gggaggagaggtggtaggacagcaagaggtgctaaaaggcctcagcaacgtaaacctcca
tctgcccctctggttcctggcctcttagatcagtccaaccctctgtccacccccatgcct
aagaaacgaagtcagaaggccaagggagacctgctactattgaagttgtccaaaggccta
gatcagccagagtctccacatccaaagaggccccccgaggactttgagaccccttctggg
gaacgaccccgccgaagggctgcccaagtggcacttctataccttcaggaactagctgaa
gagctctccacagccctgcctgcaccgctgtctggtcctaagagtcccaaggtgagcagc
cccacaaagccgaagaagacccggcaagcatcctctcagggtgaaggagacggaagcgct
cgggatgaagactttgttctccaggtcgagggtgaagatgaggaagaaagtgaggcccca
agtgagaactcatctgatccggagcctgttgcaccccgaagcaccccacgaggacctgct
gcagggaaacagaaaccacactgccggggcatggctcccaatggcttacccaattacatc
atggctcctgtttggaagtgcctccacctcaccaaggacctccgagaacagcaccattca
ttctgggagtttgctgagtggattccagtagcctggaagtggcagttgttatctgaactt
gaagcagctccctacctgccccaggaggagaagtcccccctgttctctgtacagcgggaa
gggattcctgaggatggcacaatctaccggataaacagatttagctccatcacagcacat
ccagagcgctgggatgtgtccttcttcacagggggaccactctgggctctggactggtgc
ccagtgcctgaagggtcggcagctccacagtatgtggcccttttctccagccctgacatg
aatgagacacacccactgagccagcttcattcaggccctgggttgctgcagctctggggc
cttgggacattgcagcaagaaagctgtcctggcaacagggcccactttgtctatgggatt
gcttgtgacagtggctgtatctgggacctcaagttctgccccagtggggcatgggaacat
ccagaaacccttcggaaggctcctctcctgcctcgcctgggtctcttggctctggcctgc
tcagatgggaaggtactgctgttcagcctgccgcatcctgaggccctcctggcacagcag
cctccagatgctatgaagcctgccatctacaaggtccagtgtttggcaactcttcaggta
gggtctgtgcaagcttcagacccctctgagtgtggccagtgccttagcctggcttggatg
cctaccaggcctcaccaccacctggccgctggatactataacggcatggtagttttctgg
aatcttcccactaactcgcccctccaaaggatacggctctctgatggctccttaaagctc
taccccttccagtgtttcctagcccatgaccaggccgtccgtacaattcagtggtgcaaa
gctaacagtcatttcctggtatctgcggggagtgaccggaaaatcaaattctgggatctt
cgacgaccttatgaaccaataaactgtatcaagcgcttcttgagtacagagctttcctgg
ttgctcccctataatggggtcacagtggctcaagacaactgttatgcctcttacgggctc
tgtggaattcattacattgatgccggttaccttggttttaaggcctactttactgctcca
cgaaaaggcactgtctggagtctttcaggttcagactggcttgggacagtagctgcagga
gatatatctggggagctcattgcagctattttacctgatatggcatcaaatccaatcaat
gtcaagaaacctgcagaaagacgatttcctatatataaagcagatctgataccataccag
gacagccccgaagaccaagactactcctcgacttcctctgagacccccaatcctcccaaa
gcgagaacctacactgaaaccatcaaccaccactacttgctctttcaagatacagatctg
agttccttccacaatctgcttcgtagagaaccaatgcttcgcatgcaggagggagaggga
cattctcagctttgcctggacaggctgcaacttgaagctattcacaaggtacgcttcagc
ccaaacctggactcctatggatggctggtatctggggggcagtcagggctggttcggatc
cattttgttcgtggactcacctccccactggcccaccgtgtacagcttgaaagccgagcc
aacttcaatgctatgttccaaccatcctttccaactgaagggcctggtttctctccaagc
agccattgccttctccccaacccctag
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