Mus pahari (shrew mouse): 110324374
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Entry
110324374 CDS
T05929
Symbol
Six4
Name
(RefSeq) homeobox protein SIX4
KO
K15615
homeobox protein SIX4
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
110324374 (Six4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110324374 (Six4)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
110324374 (Six4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
110324374
NCBI-ProteinID:
XP_021057552
Ensembl:
MGP_PahariEiJ_G0029599
LinkDB
All DBs
Position
7:complement(68565938..68579794)
Genome browser
AA seq
775 aa
AA seq
DB search
MSSSSPTGQIASAADIKQENGMESASEGQEAHREVAGGAAAGLSPPAPAPFPLEPGDGAA
ASRVSREEGAAAAGAADQVQLHSELLGRHQHAAAAQPPLAFSPDHVACVCEALQQGGNLD
RLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPELYSILESHSFESANHPLLQQLWY
KARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRY
PSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSESDGNPSTEDESSKGHEDL
SPHPLSGASDGVTNLNLSSHVEPVYMQQIGNAKISLSSSGVLLNGNLVPASTSPVFLNGN
SFIQGHNGVILNGLNVGNTQTVSLNPPKMSSNIVGNGIAMTDILGSTSQDVKEFKVLQSS
AVNSAATTSYSPSAPVSFPGLIPCTEVKREGIQTVASQDGGSVVTFTTPVQINQYGIVQI
PNSGANGQFLNGSLGFSPLQLPPVSVAASQGNLSVTPSTSDGSTFTSEPATVQHGKLFLS
PLTPSAVVYTVPNSGQTVGAVKQEGLERGLVFSQLMPVNHSAQVNASLSSENLSGSGLHP
LTSSLVNVSAAHGFSLTPPTLLNPAELTPDLAESQPVSAPVTSKCTVSSVSNTNYATLQN
CSLIPGQDLLSSPMTQAALGEIVPTAEEQVSHASPAVHQDFVREQRLVLQSVANIKENFL
QNSENKATNNLMMLDSKSKYVLDGMVEAGCEDLGTDKKELAKLQPVQLDEDMQDL
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttcctcccccaccgggcagattgcaagtgcggcggacatcaagcaggagaat
gggatggaaagcgcctcggaaggacaggaggcgcaccgagaagtggcggggggcgcggcg
gctgggctgagccccccggctccagcccctttccccctggagccgggggacggcgcggct
gcctccagggtaagccgggaggaaggggcagcggcggcgggagcggcagatcaggtacaa
ctccactcggaacttctgggcaggcaccagcacgcagccgccgcgcagcccccgctggcc
ttctcgccggaccatgtcgcctgcgtgtgcgaggcgttgcagcaggggggcaacctggac
cgcctggcccggtttctttggtccctgccccagagcgacctgctacgtggcaacgagagc
cttctgaaggcgcgagcgctcgtggccttccaccagggcatctaccctgagttgtacagc
atcctcgagagccacagcttcgagtcggccaaccatccgctgctgcagcagctctggtac
aaggcgcgctacaccgaggccgagcgagcgcgcggccggccgctgggcgccgtggacaag
taccggctgcgcaggaaattccccttgccccgcaccatctgggacggcgaggagacggtg
tattgtttcaaggagaagtcgcgcaacgcgctcaaggagctctacaagcagaatcgctac
ccctcgccggctgagaagcggcacctggccaagatcaccggcctctccctcacccaggtc
agcaactggttcaagaaccggcggcagcgtgaccgaaacccctccgagacccagtccaaa
agcgaatcagatggcaaccccagcaccgaggatgaatccagcaagggacatgaggatttg
tctcctcacccactttcaggtgcatctgatggagtcaccaacctcaacctctctagccac
gtggagccagtatatatgcaacaaattggaaatgctaagatatcactaagctcgtctgga
gttttgttgaatggaaacctagtacctgcaagtacttcacctgtcttccttaatggcaat
tcttttattcagggacacaatggagttatccttaatggactgaatgtgggaaatacacag
acagtgtcactgaacccacccaaaatgtcttcaaacattgtgggcaatggcatagccatg
acagacatcctgggatctacctcccaggatgtgaaagaattcaaagtcctccagagttct
gctgtgaactcagcagccaccacctcctacagccctagtgcccctgtgtcattcccaggg
ctgataccctgcactgaagtgaaaagagaaggcattcagacagtggcctcccaggacggt
ggctctgtggtgacttttactacacccgtgcaaattaaccagtatggcattgtccagatc
cctaattctggagcaaatggccagttccttaatggaagccttggattctctccactgcag
ctgcctcctgtctcagtagcagcttcacaaggtaatctttcggttaccccaagcacttcg
gacggaagcacatttacaagtgagccagctacagtccagcacggtaaacttttcctgagc
cctcttacccccagtgcagtggtatacaccgttcctaattcaggccagactgtaggagcc
gtgaaacaggaaggcttagaaagaggcctggtcttttctcagttgatgcctgtcaatcac
agtgcacaagtaaatgcaagcctgtcttcggaaaatctctctgggagtggcctccatcca
ctgacctcttcgctggttaacgtgtccgccgcgcacggtttttccctgaccccccctaca
ctacttaatcccgctgagctcacccctgaccttgccgagagccagccagtgtctgcacct
gtgacaagcaaatgtactgtgtcatctgtcagcaacaccaactatgcaacccttcagaac
tgttcccttattccgggtcaagacctattgtccagtccgatgacccaagctgccctgggt
gagatcgtacccacagctgaagaacaggtgagtcacgcctcgccagcagtccaccaggat
tttgtcagagaacaacgcttggttctgcagtcagtcgctaacataaaagagaatttctta
caaaattctgagaacaaagcaacaaacaacttaatgatgttggactcaaaatccaagtac
gtcctggacggcatggttgaagccggctgtgaagacctaggtacagacaaaaaagagctg
gccaagctccaacccgtccagttggatgaagacatgcaagacttataa
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