Mus pahari (shrew mouse): 110324416
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Entry
110324416 CDS
T05929
Symbol
Nkx2-1
Name
(RefSeq) homeobox protein Nkx-2.1 isoform X1
KO
K09342
homeobox protein Nkx-2.1
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110324416 (Nkx2-1)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
110324416 (Nkx2-1)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
110324416
NCBI-ProteinID:
XP_021057632
Ensembl:
MGP_PahariEiJ_G0029522
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Position
7:complement(53321091..53326028)
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AA seq
423 aa
AA seq
DB search
MPRLWWLPKTWRRAKTNARQPPSLHSSQLRRTRSTPLRVHPTRSALSRRRIMSMSPKHTT
PFSVSDILSPLEESYKKVGMEGGGLGAPLAAYRQGQAAPPAAAMQQHAVGHHGAVTAAYH
MTAAGVPQLSHSAVGGYCNGNLGNMSELPPYQDTMRNSASGPGWYGANPDPRFPAISRFM
GPASGMNMSGMGGLGSLGDVSKNMAPLPSAPRRKRRVLFSQAQVYELERRFKQQKYLSAP
EREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKAAQQQLQQDSGGGGGGGGGAGCPQQQ
QAQQQSPRRVAVPVLVKDGKPCQAGAPAPGAASLQGHAQQQAQQQAQAAQAAAAAISVGS
GGAGLGAHPGHQPGSAGQSPDLAHHAASPAGLQGQVSSLSHLNSSGSDYGAMSCSTLLYG
RTW
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcctctggtggctgcctaaaacctggcgccgggctaaaacaaacgcgaggcag
cccccgagcctccactcaagccaattaaggcggactcggtccactccgttacgtgtacat
ccaacaagatcggcgttaagccgacgccgaatcatgtcgatgagtccaaagcacacgact
ccgttctcagtgtctgacatcttgagtcccctggaggaaagctacaagaaagtgggcatg
gagggcggcggcctcggggctccgctcgcagcgtacagacagggccaggcggccccgccg
gccgcggccatgcagcagcacgccgtggggcaccacggcgccgtcaccgccgcctaccac
atgacggcggcgggggtgccccagctctcgcactccgccgtggggggctactgcaacggc
aacctgggcaacatgagcgagctgccgccttaccaggacaccatgcggaacagcgcttcg
gggcccggatggtacggcgccaacccagacccgcgcttccccgccatctcccgcttcatg
ggcccggcgagcggaatgaatatgagcggcatgggcggcctgggttcgctgggggacgtg
agcaagaacatggccccgctgcccagtgcgccccgccggaagcgcagggtgctcttctcc
caggcgcaggtgtacgagctcgagcgacgtttcaagcaacagaagtacctgtcggcgccg
gagcgcgagcatctggccagcatgattcacctgacacccacgcaggtcaagatctggttc
cagaaccaccgctacaagatgaagcgccaggctaaggacaaggcggcgcagcagcaactg
cagcaggacagcggcggcggcggaggcggcggaggtggcgcgggatgcccgcagcagcag
caagctcagcagcagtcgccgcgccgggtggccgtgccggtcctagtcaaagacggcaaa
ccctgccaggcgggcgcccctgccccgggagccgccagccttcaaggccacgcgcagcaa
caagctcagcagcaggcgcaggcagcgcaagcggccgccgcggccatctcggtgggcagc
ggtggcgcgggtctaggagcacacccaggtcaccagccgggcagcgcagggcagtccccg
gacctggcgcaccacgcagccagcccggcaggtttgcagggccaggtctccagcctatcc
catctgaactcctcgggctcggactatggcgccatgtcttgctctaccttgctttatggt
cggacctggtga
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