Mus pahari (shrew mouse): 110324457
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Entry
110324457 CDS
T05929
Symbol
Pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03013
Nucleocytoplasmic transport
mpah03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110324457 (Pnn)
03015 mRNA surveillance pathway
110324457 (Pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110324457 (Pnn)
03041 Spliceosome [BR:
mpah03041
]
110324457 (Pnn)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110324457 (Pnn)
Spliceosome [BR:
mpah03041
]
Complex C
Other components
EJC/TREX
110324457 (Pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
110324457
NCBI-ProteinID:
XP_021057707
Ensembl:
MGP_PahariEiJ_G0029535
LinkDB
All DBs
Position
7:55709754..55718339
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AA seq
730 aa
AA seq
DB search
MAVAVRALQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEAGIVHSDAEKEQEEEEQKQ
EVEVKMEEETEVREGEKQQDSQPEEVMDVLEMVESVKNVIAEQEVMETNQVESVEPSENE
TSKELEPEMEFDVEPDKECKSLSPGKENINSQEVEKESEEKEEKEEKEPGPQPEPVAQPQ
PPPQPLPQSQPHSQPHSQPQPQPQPVLQSQPLCQPETLPLAVLQPPPQVIQEQGILLPER
KDFPIESVKLPEVSVEPVLTVHSESKSKNKTRSRSRGRARNKTSKSRSRSSSSSSSSSSS
TSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHR
RSVDRKRRDTSGLERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERD
RKSDRKDKRR
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgccgtgagagctttgcaggagcagctagagaaggccaaagagagcctcaag
aacgtggacgagaatatccgcaagctcaccgggcgggacccgaatgatgtgaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgaggtagcttattg
ctaaggcgtggattctcagatagtggaggaggacccccagccaaacaaagagacctggaa
ggggcagtcagtaggctgggtggggaacgtcggacaagaagagaatcacgccaggagagc
gacccagaagacgatgatgttaaaaagccagcactgcaatcttccgttgtagctacctcc
aaagaacgcacacgtagagaccttatccaggatcagaacatggatgaaaagggaaagcaa
aggaaccggcgaatatttggcttgttgatgggcactcttcagaaatttaaacaagaatct
actgttgctactgaacggcaaaaaagacgccaagaaattgaacaaaaacttgaagttcag
gctgaagaagagagaaagcaggttgaaaatgagaggagagaactgtttgaggagaggcgt
gctaaacagacagaactgcggcttctggagcagaaggttgagcttgcacagctgcaagaa
gaatggaatgaacataatgccaagataattaagtatataaggaccaagacaaagccccat
ttgttctatattcctggaagaatgtgtccagctacccaaaagctaatagaagagtcacag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaggcaggagaggaagaggagaag
gaagcaggtatagttcatagtgatgcagaaaaagaacaggaggaggaggagcaaaagcag
gaagttgaagttaagatggaggaggagactgaggtaagagaaggtgagaagcagcaggat
agtcagccagaagaagtgatggatgtgctagagatggttgaaagtgtcaaaaacgtaatt
gctgagcaggaagtgatggaaactaatcaagttgaaagtgtagaaccttcagaaaatgaa
actagcaaagaattggagccagagatggaatttgatgttgagccagataaagaatgtaaa
tctctttctcctggaaaagagaatattaattctcaggaagtggaaaaggagtctgaggag
aaagaggaaaaagaagagaaagaacctgggccccaacctgagcctgtggctcagcctcag
cccccacctcagcccctgccccagagccagccccactctcagccccactctcagccccag
cctcagccccagcctgtactccagtcccagcctctctgtcagcccgagactttgccatta
gctgttttgcagcctccacctcaggttattcaggagcaagggattctactacctgagcgg
aaggattttcctatagagtccgtaaaactccctgaggtgtctgtagagccagtcttgaca
gtacattcagaaagcaagagcaaaaataagactaggagcagaagcagagggcgagcaagg
aataaaacaagcaagagtagaagtcgcagcagcagcagcagtagttccagtagcagctct
actagtagcagcagtgggagcagctccagcagtggcagcagtagtagtcgaagcagctcc
agtagcagctccagcacaagtgggagcagcagcagagacagcagcagcagcactagcagt
agcagtgagagtaggagtcgcagtaggggccgaggacataaccgagatagaaagcacaga
aggagcgtggaccggaagcgaagggatacttcaggactagaaagaagtcacaagtcttca
aaaggtggtagtagtagagatacaaaaggatcaaaggataagaattcccgctctgacaga
aaaaggtctatatcagagagtagtcgatcaggcaaaagatcttcaagaagtgaaagagac
cgaaaatcagacaggaaagacaaaaggcgttaa
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integrated database retrieval system
