Mus pahari (shrew mouse): 110324954
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Entry
110324954 CDS
T05929
Symbol
Lamb1
Name
(RefSeq) laminin subunit beta-1 isoform X1
KO
K05636
laminin, beta 1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04151
PI3K-Akt signaling pathway
mpah04510
Focal adhesion
mpah04512
ECM-receptor interaction
mpah05145
Toxoplasmosis
mpah05146
Amoebiasis
mpah05165
Human papillomavirus infection
mpah05200
Pathways in cancer
mpah05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
110324954 (Lamb1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110324954 (Lamb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110324954 (Lamb1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110324954 (Lamb1)
09162 Cancer: specific types
05222 Small cell lung cancer
110324954 (Lamb1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
110324954 (Lamb1)
09174 Infectious disease: parasitic
05146 Amoebiasis
110324954 (Lamb1)
05145 Toxoplasmosis
110324954 (Lamb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
CorA
ATG17_like
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-GeneID:
110324954
NCBI-ProteinID:
XP_021058369
Ensembl:
MGP_PahariEiJ_G0029432
LinkDB
All DBs
Position
7:29824251..29887809
Genome browser
AA seq
1834 aa
AA seq
DB search
MEGPLSSLPTFAFSPRYLSRKEDPKKRQAACLPRPPSRAASPRLQGLDMGLLQVFAFGVL
ALWGTRVCAQEPEFSYGCAEGSCYPATGDLLIGRAQKLSVTSTCGLHKPEPYCIVSHLQE
DKKCFICDSQDPYHETLNPDSHLIENVVTTFAPNRLKIWWQSENGVENVTIQLDLEAEFH
FTHLIMTFKTFRPAAMLIERSSDFGKTWGVYRYFAYDCESSFPGISTGPMKKVDDIICDS
RYSDIEPSTEGEVIFRALDPAFKIEDPYSPRIQNLLKITNLRIQFVKLHTLGDNLLDSRM
EIREKYYYAVYDMVVRGNCFCYGHASECAPVDGVNEEVEGMVHGHCMCRHNTKGLNCELC
MDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGR
NCEQCKPFYFQHPERDIRDPNLCEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHV
EGERCDVCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQ
CLPQHWGLSNDLDGCRPCDCDLGGAVNNSCSEDSGQCSCLPHMIGRQCNEVESGYYFTTL
DHYIYEAEEANLGPGVVVVERQYIQDRIPSWTGPGFVRVPEGAYLEFFIDNIPYSMEYEI
LIRYEPQLPDHWEKAVITVQRPGKIPASSRCGNTVPDDDNQVVSLSPGSRYVVLPRPVCF
EKGMNYTVRLELPQYTASGSDMESPYTFIDSLVLMPYCKSLDIFTVGGSGDGEVTNSAWE
TFQRYRCLENSRSVVKTPMTDVCRNIIFSISALIHQTGLACECDPQGSLSSVCDPNGGQC
QCRPNVVGRTCNKCAPGTFGFGPNGCKPCDCHLQGSVSAFCDAITGQCHCFQGIYARQCD
RCLPGYWGFPSCQPCQCNGHAEDCDTVTGECLSCQDYTTGHNCERCLAGYYGDPIIGSGD
HCRPCPCPDGPDSGRQFARSCYQDPVTLQLACVCDPGYIGSRCDDCASGFFGNPSDFGGS
CQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEGDHCQFCQYGYYGDALRQDCRKCVCNY
LGTVKEHCNGSDCHCDKTTGQCSCLPNVIGQNCDRCAPNTWQLASGTGCGPCDCNTVHSF
GPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGIETPQCDQSTGQCV
CVEGVEGPRCDKCTRGYSGVFPDCTPCHQCFALWDAIIGELTNRTHKFLEKAKALKISGV
IGPYRETVDSVEKKVNEIKDILAQSPAAEPLKNIGILFEEAEKLTKDVTEKMAQVEVKLS
DTASQSNSTAGELDALQAEAESLDKTVKELAEQLEFIKNSDIQGALDSITKYFQISLEAE
KRVNASTTDPDSTVEQSALTRDRVEDLMLERESQFKEKQEEQARLLDELAGKLQSLDLSA
AAEMTCGTPPGADCSESECGGPNCRTDEGEKKCGGPGCGGLVTVAHSAWQKAMDFDRDVL
SALAEVEQLSKMVSEAKVRADEAKQNAQNVLLKTNATKEKVDKSNEDLRNLIKQIRNFLT
EDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVETLSQVEVILQQSAADIARAE
LLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADEDIQGTQNLLTSIES
ETAASEETLTNASQRISKLERNVEELKRKAAQNSGEAEYIEKVVYSVKQNADDVKKTLDG
ELDEKYKKVESLIAQKTEESADARRKAELLQNEAKTLLAQANSKLQLLEDLERKYEDNQK
YLEDKAQELVRLEGEVRSLLKDISEKVAVYSTCL
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atggaagggcccctctcctctcttccaacgtttgccttttctccccgctacctctccaga
aaggaagacccgaagaaaagacaggcagcttgcctgccgcgtcctccttcccgtgccgcg
tcccctcggttgcaaggactggacatggggctgctccaggtgttcgcctttggtgtccta
gccctatggggcacccgagtgtgcgctcaggaaccggagttcagctatggctgtgcagaa
ggcagctgctaccctgccactggcgaccttctcatcggccgagcgcaaaagctctcagtg
acctcgacgtgcggattgcacaaaccagagccctactgtattgtcagccacctgcaggag
gacaagaaatgcttcatatgtgactcccaagatccttatcatgagaccctcaatcccgac
agccatctcattgagaatgtggtcacgacatttgctccaaaccgccttaagatttggtgg
cagtccgaaaatggtgtggagaacgtgactatccaactggacctggaagcagaattccac
ttcactcatctcatcatgactttcaagacgttccgcccagccgccatgctgatcgagcgg
tcttctgactttgggaagacttggggcgtgtacagatacttcgcctacgactgtgagagc
tcgttcccaggcatttcaactgggcccatgaagaaagtggatgacatcatctgtgactct
cgatattctgacattgagccctcaacggaaggagaggtaatatttcgtgctttagatcct
gccttcaaaattgaagatccttatagtccaaggatacagaatctattaaaaatcaccaac
ttgagaatccagtttgtgaagctccacaccttgggagataaccttttggactccagaatg
gaaatcagggagaagtactattacgctgtttatgacatggtggttcgagggaactgcttc
tgctatggccatgccagtgaatgcgcccctgtggatggagtcaatgaagaagtggaaggg
atggttcacgggcattgcatgtgcagacacaacaccaaaggcttgaactgtgagctgtgc
atggatttctaccacgatttgccatggagacccgctgaaggccggaacagcaacgcctgt
aaaaaatgtaactgcaacgaacattccagctcatgtcactttgacatggcggtcttcctg
gctactggcaacgtcagtgggggagtgtgtgataactgccagcacaacaccatggggcgc
aactgtgagcagtgcaaaccgttctacttccagcaccccgagagggacatccgggacccc
aatctctgcgaaccatgtacctgtgacccagctggttctgagaatggcgggatctgtgac
gggtacactgatttttctgtgggtctcattgctggtcagtgtcggtgcaaactgcacgtg
gagggagagcgctgtgatgtttgtaaagaaggcttctacgacttaagtgccgaagacccg
tatggttgtaaatcatgtgcttgcaatcctctggggacaattcctggtgggaatccttgt
gattctgagaccggctactgctactgtaagcggctggtgacaggacagcgctgtgaccaa
tgcctgccgcagcactggggcttaagcaatgatttggatggatgtcgaccttgtgactgt
gaccttggaggggcggtgaacaatagctgctcggaggactccggccagtgctcttgcctg
ccccacatgattgggcggcagtgtaacgaggtggagtcgggttactatttcaccaccctg
gaccactacatctacgaagctgaggaagccaatctggggcccggagtcgttgtggtggaa
aggcagtacattcaggaccgcattccttcctggacaggacctggcttcgtccgagtgcct
gaaggggcttatttggagtttttcattgacaacataccatattccatggagtatgaaatc
ctaatccgctatgagccacagctgccggaccactgggagaaagctgtcatcactgtacag
cggccggggaagattccagccagcagccgatgtggtaacaccgttcccgatgatgacaac
caggtggtatccttgtcaccgggctcaagatacgttgtcctccctcgccccgtgtgcttt
gagaagggaatgaactacacggtgaggttggagctgccccagtatacggcctcgggcagt
gacatggagagcccgtacacgttcattgactcgcttgttctcatgccttactgtaagtca
ctggacatcttcactgttggaggctcaggcgatggggaggtcaccaatagtgcctgggaa
accttccagcgctacaggtgtctggagaatagccggagcgtggtaaagacacctatgaca
gatgtctgcagaaacatcatcttcagcatctctgccttgattcaccagacaggccttgct
tgtgaatgtgaccctcagggatctctgagttccgtgtgtgaccccaacggtggccagtgc
cagtgccgtcctaatgtggtcggaagaacctgcaacaagtgtgccccaggcaccttcggc
tttggtcccaacggatgcaaaccttgtgactgccatctgcaagggtctgtcagtgccttc
tgtgatgcgatcactggccagtgccactgtttccagggcatctatgcccggcagtgcgac
cgatgtctccctgggtactggggctttcccagctgccagccctgccagtgtaatggtcac
gctgaagactgtgacaccgtgacaggggagtgtctgagctgtcaggactacaccacaggc
cacaactgtgaaaggtgcctggctggctactacggtgatcccatcattgggtcaggagac
cactgtcgcccttgcccttgtcccgatggtcctgacagtggacgccagtttgccaggagt
tgttatcaagatcccgtcactctccagcttgcatgtgtttgtgatcctgggtacattggc
tccagatgtgatgactgtgcctctggattttttggcaatccctcagactttgggggttca
tgtcaaccatgtcagtgccaccacaacattgacactaccgatccagaagcctgtgacaag
gagacggggagatgcctcaaatgcctgtaccacacagaaggggaccattgccagttctgc
cagtacgggtactacggcgatgctcttcgacaagactgtagaaagtgtgtctgcaattac
ctgggcacggtgaaggaacattgtaatggctctgactgccactgtgacaaaaccactggt
cagtgctcctgtcttcccaatgtgatcgggcagaactgtgatcgatgtgcgcccaacacc
tggcagctggctagcgggactggctgcgggccctgcgattgcaatactgtgcattccttt
gggccatcctgcaatgagttcacaggacagtgccagtgcatgccgggctttggaggccga
acctgcagcgagtgccaggagctcttctggggagaccccgatgtggaatgccgagcctgt
gactgtgaccccaggggcattgagacaccgcagtgtgaccagtccacgggccagtgtgtc
tgtgtggagggtgtggagggtcctcgctgtgacaaatgtaccagagggtactcgggggtc
tttcctgactgcacaccctgccaccagtgctttgctctctgggatgccatcattggtgag
ctgaccaacaggacccacaaattcctggagaaagccaaggctctgaaaatcagtggtgtg
attggtccctaccgagagaccgtggactctgtggagaagaaagtcaatgagataaaagac
atcctggcccagagcccagccgccgaacccctgaaaaacattggcattctctttgaggag
gcagagaaattaaccaaagatgtcacagaaaagatggctcaagtagaagtgaaattatct
gatacagcttcacagagtaacagcacagctggagagctcgacgcactgcaggcagaagca
gagagccttgacaagaccgtgaaagagctggcagaacagctggaatttatcaaaaactct
gatattcagggagccttggacagcatcaccaagtatttccagatctctcttgaggcagag
aagcgggtgaatgcctccaccacagaccccgacagcacagtggagcagtcggccctcacg
agagacagagtagaagacctgatgttggagcgagagtctcagttcaaggagaagcaggag
gaacaggcacgccttctggacgaactggccggcaaactgcagagtctcgacctgtcggct
gctgcagagatgacctgtggaacgcctccaggggctgactgttctgaaagtgaatgtggc
ggccccaactgcagaactgacgaaggagagaagaagtgtggggggcctggctgtggtggt
ctggtcactgtggcccacagtgcttggcagaaagccatggattttgaccgtgacgtcctg
agtgctcttgctgaagtagaacagctctccaagatggtctctgaagcaaaagtgagagcg
gatgaggcgaagcagaatgcgcagaatgtcctgttaaaaacaaatgctaccaaagaaaaa
gtggacaagagcaacgaggacctgaggaacctcatcaagcagatcagaaacttcctgact
gaggatagtgcggatctagacagtattgaagcagttgctaatgaagtactgaaaatggaa
atgcctagcacaccacagcagttacagaacctaacagaagacatccgggaacgagttgaa
accctttctcaagtagaggttattttgcagcagagtgcagctgacattgccagagctgag
ctgttgctcgaggaagctaagagagcaagcaaaagtgcaacagatgttaaagtcactgca
gacatggtgaaggaagcattagaagaagcagaaaaggcccaggttgcagcagagaaggcg
attaaacaagctgatgaggatatccaaggaacgcaaaacctgctaacatcgattgaatct
gaaaccgcagcttctgaggaaaccctcaccaacgcctcccagcgcatcagcaagcttgag
aggaacgtggaagagcttaagcgtaaagctgcccagaactctggggaggcagaatatatc
gaaaaagtcgtatattctgtaaaacagaatgcagatgatgttaagaagactctagatggc
gaacttgatgaaaagtataagaaagtagaaagcttaattgcccaaaaaactgaagagtca
gcagatgccaggaggaaagctgagctgctacaaaatgaagcaaaaacactcttggctcaa
gccaacagcaaacttcagctgctggaagacttagaaagaaaatatgaggacaatcaaaaa
tacttagaagataaagctcaagaattagtgcgactggaaggagaagtccgctccctcctt
aaggacataagtgagaaagttgctgtttacagcacctgcttataa
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integrated database retrieval system
