Mus pahari (shrew mouse): 110325180 Help Entry 110325180         CDS       T05929                                  Symbol Vcl Name (RefSeq) vinculin isoform X1   KO K05700   vinculin Organism mpah  Mus pahari (shrew mouse) Pathway mpah04510   Focal adhesion mpah04520   Adherens junction mpah04670   Leukocyte transendothelial migration mpah04810   Regulation of actin cytoskeleton mpah04820   Cytoskeleton in muscle cells mpah05100   Bacterial invasion of epithelial cells mpah05146   Amoebiasis Brite KEGG Orthology (KO) [BR:mpah00001]  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     110325180 (Vcl)    04520 Adherens junction     110325180 (Vcl)   09142 Cell motility    04820 Cytoskeleton in muscle cells     110325180 (Vcl)    04810 Regulation of actin cytoskeleton     110325180 (Vcl)  09150 Organismal Systems   09151 Immune system    04670 Leukocyte transendothelial migration     110325180 (Vcl)  09160 Human Diseases   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     110325180 (Vcl)   09174 Infectious disease: parasitic    05146 Amoebiasis     110325180 (Vcl)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:mpah04812]     110325180 (Vcl)    04147 Exosome [BR:mpah04147]     110325180 (Vcl) Cytoskeleton proteins [BR:mpah04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      110325180 (Vcl) Exosome [BR:mpah04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    110325180 (Vcl) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vinculin Talin_IBS2B VMAP-M0 Motif Other DBs NCBI-GeneID:  110325180 NCBI-ProteinID:  XP_021058583 Ensembl:  MGP_PahariEiJ_G0030016 LinkDB All DBs Position 8:12539078..12638794 Genome browser AA seq 1134 aa AA seqDB search MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPNASPGDAGEQAIR QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE LCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRA VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFS DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLGATAEKAAAVGTANKSTVEG IQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM AARQLHDEARKWSSKPGIPAAQVGIGIVAEADAADAVGFPFPSDMEDDYEPELLLMPSNQ PVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAK DIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNIS DEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ NT seq 3405 nt NT seq  +upstreamnt  +downstreamnt atgccggtgtttcacacgcgtacgatcgagagcatcctggagccggtggcgcagcagatc tcgcacctggtgattatgcacgaggagggcgaggtggacggcaaagccattcctgacctc accgcgcccgtggctgccgtgcaggcggccgtcagcaacctcgtccgggttggaaaagag actgttcagaccactgaggatcagattctgaagagagatatgccaccagcatttattaag gttgaaaatgcttgcaccaagcttgttcaggccgcccagatgcttcagtcagacccatac tcagttcctgcgcgggattacctcattgacggctctaggggaatcctttctggcacatct gacctactgcttacctttgatgaggctgaggttcgtaaaattattagggtttgcaaagga attttggaatatcttacagtggcagaggtagtggaaactatggaagacttggtcacttac acaaagaatcttgggccaggaatgactaagatggccaaaatgattgatgagagacagcag gagttgactcaccaggaacaccgagtgatgttggtgaactcaatgaacacagtcaaagag ctgcttcctgttctcatttcagctatgaagatttttgttacaaccaaaaactcaaaaaac caaggaatagaagaagctttgaaaaatcgaaattttactgtagaaaagatgagtgctgaa attaatgagatcattcgtgtgttacaactcacttcctgggatgaagatgcctgggccagc aaggacactgaagccatgaagagagcactggcatccatagactccaaattgaaccaggcc aaaggttggctccgtgaccccaatgcctccccaggggatgctggagagcaggccatcagg cagatcttagatgaagctggaaaagttggtgaactttgtgcaggcaaggaacgcagggag atcctaggaacctgcaaaatgctagggcagatgactgaccaagtggctgacctccgagcc agaggacaaggagcctccccagtggccatgcagaaggcccagcaagtgtctcaagggctt gatgtgcttactgcgaaagtggaaaatgcagctcggaagctggaagccatgacaaactca aagcagagcattgcaaagaagattgatgctgcccagaattggctggcagatccaaatggt ggacctgaaggagaagaacagattcgaggggctttggctgaagctcgaaagattgcagaa ttatgtgatgatcctaaggagagagatgatatcctccgctcccttggagagatagctgct ctgacctctaaactaggagacttgcgaagacaggggaaaggagactcgccagaggctcga gccttggctaaacaagtggcgacggcgctacagaacctgcagaccaaaaccaacagggct gtggccaacagcagacctgccaaagcagctgtccaccttgagggcaagattgaacaggcg cagcggtggattgataaccctacagtagatgaccgtggagtcggtcaggctgctatccgt ggacttgtggctgaggggcatcggctggccaatgtcatgatgggaccttatcgccaagat cttcttgccaaatgtgaccgtgtagaccagctaacagctcagttggctgacctggctgcc cgaggggagggggagagtcctcaggcgagagcacttgcatcccagcttcaggactcctta aaggatcttaaagcccagatgcaggaagctatgactcaagaggtgtccgatgttttcagc gatactacaactcctatcaagctgttggcagtagccgccactgctcctcctgatgcaccc aatagagaagaggtatttgatgaaagggcagccaattttgaaaaccattcaggaaggctt ggagccacagcagagaaggcagctgctgttggtactgccaataaatcgacagtggaaggc attcaggcatctgtgaagacagcccgagaactcactccccaggtcatctcagctgctcgg atcttactgaggaaccctggtaaccaggccgcttatgaacattttgagactatgaagaac cagtggattgataatgttgaaaaaatgacagggctggtggacgaggctattgataccaag tctctgttggatgcttctgaagaagcaattaaaaaagacctggacaagtgtaaggtagct atggccaatattcagcctcagatgctggtcgctggagcaaccagtattgctcgtcgggcc aaccggattctgctggttgctaagagggaggtagagaactctgaggacccgaagttccga gaggctgtgaaagctgcctctgatgaattgagcaaaacaatctcccccatggtgatggat gccaaggctgtggctggaaacatctctgaccctggcctgcaaaagagcttcctggactca ggatatcggatcctgggagctgtggccaaggtcagagaagccttccaacctcaggagcct gacttcccgcctcctccaccagaccttgaacagctacgactaactgatgagctggctcct cctaaaccacctctgcctgagggtgaagtccctccacccaggcccccaccaccagaagag aaggatgaagagttccctgagcagaaagctggggaggtgattaaccagccaatgatgatg gctgccaggcagctccatgatgaagctcggaaatggtctagcaagccgggtatcccagcc gctcaggtgggtataggaattgtagctgaggcagatgcggctgatgctgttgggttccct ttcccctctgacatggaagacgattacgaacctgagctgctgttaatgccatctaatcag ccggtcaaccagcccattctggccgcggctcagtccttgcaccgggaagctaccaagtgg tctagtaagggcaatgacatcattgcagcagccaagcgcatggctctgctgatggcagag atgtctcggctggtaagagggggcagtggtaccaagcgggcacttattcagtgtgccaag gatatcgccaaggcctctgatgaggtgacgaggttggccaaggaggttgccaagcagtgc acagataagcggattagaaccaatctcttacaggtatgtgagcgaatcccaactataagc actcagctcaaaatcctgtccacggtgaaggctacaatgctgggccggaccaacatcagt gatgaggagtctgagcaggccacagagatgctggttcataatgcccagaacctcatgcag tctgtgaaggagaccgtgcgagaagcagaagctgcttcaatcaaaattcgaacagatgct ggatttactctgcgctgggtcagaaagactccctggtaccagtag

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