Mus pahari (shrew mouse): 110325190
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Entry
110325190 CDS
T05929
Symbol
A1cf
Name
(RefSeq) APOBEC1 complementation factor isoform X1
KO
K24978
APOBEC1 complementation factor
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110325190 (A1cf)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
APOBEC1-ACF complex
110325190 (A1cf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DND1_DSRM
RRM_7
RRM_5
BRAP2
dsrm
Motif
Other DBs
NCBI-GeneID:
110325190
NCBI-ProteinID:
XP_021058616
Ensembl:
MGP_PahariEiJ_G0014366
LinkDB
All DBs
Position
1:143409301..143484141
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AA seq
595 aa
AA seq
DB search
MESNHKSGDGLNGTQKEAALRALVQRTGYSLVQENGQRKYGGPPPGWDATPPERGCEVFI
GKLPRDLFEDELIPLCEKIGKIYEMRLMMDFNGNNRGYAFVTFSNKQEAKNAIKQLNNYE
IRTGRLLGVCASVDNCRLFVGGIPKTKKREEILSEMKKVTEGVVDVIVYPSAADKTKNRG
FAFVEYESHRAAAMARRRLLPGRIQLWGHPIAVDWAEPEVEVDEDTMSSVKILYVRNLML
STSEEMIEKEFNSIKPGSVERVKKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTL
AKPVDKDSYVRYTRGTGGRNTMLQGEYSYPLSHVYDPTTTYLGAPVFYTPQAYAAIPSLH
FPATKGHLSNRALIRTPSVREIYMNVPVGAAGVRGLGGRGYLAYTGLGRGYHVKGDKRED
KLYDLLPGMELTPMNTVSLKPQGIKLAPQILEEICQKNNWGQPVYQLHSAIGQDQRQLFL
YKVTIPALASQNPAIHPFIPPKLSAYVDEAKRYAAEHTLQSLGIPTEGGDAGTTAPTVTS
ATVFPGYAVPSATAPVSTAQLKQAVTLGQDLAAYTTYEVYPTFALTTRGDAYGTF
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaaatcacaaatccggggatggattgaacggcacccagaaggaagcagcactc
cgcgcactggtccaacgtacaggatatagcttggtccaggaaaatggacaaagaaagtac
ggcggccctccaccaggctgggatgctacacctccagaaaggggctgcgaggttttcatc
gggaaacttccccgggatctttttgaggatgaactcataccgttgtgtgaaaaaattggt
aaaatttatgaaatgagattgatgatggattttaatggtaacaacagaggctatgcattt
gtaacattctcaaataagcaggaagccaagaatgcaatcaagcaacttaataattatgaa
attcggactggccgtctcctgggagtctgtgccagtgtggacaactgccgattgtttgtg
ggaggaatccccaaaaccaaaaagagggaagaaatattatcagagatgaaaaaggtcaca
gaaggagttgttgatgtcattgtctacccaagtgctgctgataaaaccaaaaaccggggc
tttgcctttgtggaatatgagagtcaccgagcagccgccatggctaggcggaggctcctg
ccaggaagaattcagttgtggggacatcctattgcagtagactgggcagagccagaagtt
gaagttgatgaggacacaatgtcttccgtgaaaatcctatacgtaaggaaccttatgctg
tctacctcagaagaaatgattgaaaaggaattcaacagtattaaaccaggttctgtggaa
agagtgaagaagatccgagactacgcttttgtgcacttcagtaaccgagaagatgcagtt
gaagccatgaaggctttgaatggcaaggtgctggatggctcccccatagaagtgaccttg
gccaagccagtggacaaggacagttatgttaggtacacccggggcaccggtggcaggaac
accatgctgcaaggggaatactcctaccctctgagccatgtttatgaccctactacaacc
taccttggagctcctgtcttctataccccccaagcctacgcagccattccaagtcttcat
ttcccagctactaaaggacatctcagcaacagggctctcatcaggaccccttctgtcaga
gaaatttacatgaatgtccctgtaggggctgcgggggtgagaggactgggcggccgtggg
tatttggcatacacaggcctgggtcgaggataccacgtcaaaggagacaagagagaagac
aaactctatgaccttctgcctgggatggagctcaccccgatgaatactgtctctttaaaa
ccacaaggaattaaacttgctcctcagatattagaagaaatctgtcagaaaaataactgg
ggacagccagtgtaccagctgcattctgccattggacaagaccaaagacagttattcctc
tacaaagtaactatcccagcgctggccagccagaatcctgcaatccaccctttcatacct
ccgaagctaagcgcctatgtggatgaagcgaagaggtacgctgcggagcacactctacag
tcactaggcatccccacagaaggaggggacgctgggactacggcacccacagtcacatct
gccaccgtgttcccaggatatgctgtccccagtgccaccgctcctgtgtctacagcccag
ctcaagcaggcagtgacacttggacaagacttagcagcatatacaacctatgaggtctac
cctacttttgcactgaccacccgaggcgatgcatatggaaccttctga
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