Mus pahari (shrew mouse): 110325291
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Entry
110325291 CDS
T05929
Symbol
Samd4a
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110325291 (Samd4a)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
110325291 (Samd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
110325291
NCBI-ProteinID:
XP_021058861
Ensembl:
MGP_PahariEiJ_G0030178
LinkDB
All DBs
Position
8:37710636..37927806
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AA seq
711 aa
AA seq
DB search
MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSQTQARFLQLCLEHSLADCAELHVLEG
EANSPGIINQWQQESKDKVISLLLTHLPLLKPGNLDAKVEYMKLLPKILAHSIEHNQHIE
ESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSTSFGSQNRGRSDSVDYGQTHYYHQR
QNSDDKLNGWQNSRDSGICISASNWQDKSLGCENGHVPLYSSSSVPATINTIGTSTSTIL
SGQAHHSPLKRSVSLTPPMNVPNQPLGHGWMSHEDLRARGSQCLPSDHAPLSPQSSVASS
GSGGSEHLEDQTTARNTFQEEGSGMKDVPAWLKSLRLHKYAALFSQMTYEEMMALTECQL
EAQNVTKGARHKIVISIQKLKERQSLLKSLERDIIEGGSLRTPLQELHQMILTPIKAYSS
PSTTPEVRRHEPSLMENPSPDCKDSATAVTSSTAGASAGASGGLQPPQLSSCDGELAVAP
LPEGDLPGQFTRVMGKVCTQLLVSRPDEENISSYLQLLDKCLVHEAFTETQKKRLLSWKQ
QVQKLFRSFPRKTLLDISGYRQQRNRGFGQSNSLPTASSVGSGMGRRNPRQYQVASRNVP
SARLGLLGTSGFVSTNQRHTAANPTIMKQGRQNLWFANPGGSNSMPSRTHSSVQKTRSLP
VHTSPQNMLMFQQPEFPLPVTEPDINNRLESLCLSMTEHALGDGVDRTSTI
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgcgaccaggtcggggtgctggcgggctggtttaagggctggaacgagtgc
gagcagactgttgcactgctgtcgctgctcaagcgcgtaagccagacccaggcccgcttc
cttcagctctgcctggagcactcgctggccgactgcgcggagctgcacgtcctggaagga
gaggccaacagcccgggaatcattaaccaatggcaacaggaatccaaggataaagtgatt
tcccttctgctaactcacctgcctttgctgaagccaggaaacctcgacgcgaaagtagag
tatatgaaactgctgcccaagatcctggcacactctatcgaacacaaccagcacattgag
gagagcaggcagctgctgtcctatgctttgatccacccagccacttccttggaagaccgc
agcgcactagccatgtggctgaatcacttggaggaccgcacatccaccagctttggtagc
cagaaccgaggccgctcggactctgtggattatggacagacgcactactatcaccaaaga
cagaactctgacgacaagctcaatggctggcagaactctcgggattctgggatttgcatc
agcgcctccaactggcaggacaagagcctgggctgtgagaatggccatgtgcccctctac
tcttcctcatctgtccccgccacaatcaacacgattggaaccagcacaagcacgattctc
tcaggccaggcacaccacagccctttgaaacgatctgtgtcccttaccccacccatgaat
gtgccaaaccagcctctaggacatggatggatgtctcatgaggacttacgagctagagga
tctcagtgcctcccatccgatcatgcccccctgtctccacaaagcagtgtagcctcttca
ggaagtggtgggagtgaacacttagaagatcagaccactgctcgtaacacattccaagaa
gaaggtagtggtatgaaagatgttccagcttggttaaaaagcctccgcttgcacaagtac
gctgcgctcttctcgcagatgacttatgaggaaatgatggccctcactgagtgtcaactg
gaggctcagaatgttaccaaaggcgcaagacacaaaattgtaatcagtattcagaagctc
aaagaaagacagagcctcctgaagtctttggaaagggacatcatcgaagggggcagcctg
cgcacccccctccaggagctacatcagatgatcctgacacccatcaaggcctacagctct
cccagtaccacccctgaggtgcgccgccacgagccctcactgatggagaacccaagccct
gactgcaaagacagcgccacagcagtcaccagctccacagccggtgcctcagccggtgcc
agcggtggactgcaaccaccccagctgagcagctgcgacggagagctggctgtcgcccct
ctgccggagggggacctcccggggcagttcactcgagtcatggggaaagtgtgcacacag
ctcttggtctccagacccgatgaggaaaatataagctcctatctacagctcttagacaag
tgtctcgttcacgaggcatttacagagacacagaaaaaaagattgttgtcatggaaacag
caggtgcagaagctctttcggtctttccctcggaaaacccttctagacatatcaggatat
cgacagcaaagaaatcgtggctttgggcaatccaactccctcccgacagccagctctgtg
ggcagcggcatgggtagacggaacccacgacagtaccaggtcgcatctcggaacgtccct
tccgcccgccttggtctcctgggcaccagtggattcgtcagcaccaaccagcgccacacc
gctgccaaccccaccatcatgaaacaaggaagacagaacctctggtttgccaaccctggg
ggcagcaacagcatgcccagccgcacccacagctccgtccagaagacccgctcgctgccc
gtgcatacttccccacaaaacatgctgatgttccagcaaccagaatttccgcttcccgtg
actgaacctgacatcaacaataggctggagtccttgtgcctcagtatgacggagcatgcc
ctgggagacggggttgaccggacctccacaatctag
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