Mus pahari (shrew mouse): 110325345
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Entry
110325345 CDS
T05929
Symbol
Polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03020
RNA polymerase
mpah04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110325345 (Polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
110325345 (Polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpah03021
]
110325345 (Polr3a)
Enzymes [BR:
mpah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110325345 (Polr3a)
Transcription machinery [BR:
mpah03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
110325345 (Polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
110325345
NCBI-ProteinID:
XP_021058951
Ensembl:
MGP_PahariEiJ_G0030029
LinkDB
All DBs
Position
8:complement(15967518..16006292)
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNNHAPLLYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYIDLELPCFHVGYFRAVIGILQMICKTCCHIMLSQE
EKQQFVDFLKRPGLTYLQKRGLKKKISDKCRKKSTCHYCGAFNGTVKKCGLLKIIHEKYK
TNKKVVDPIVSNFLQSFETAIEHNKEVEPLLGRAQENLNPLVVLNLFKRIPAEDVPLLLM
NPESGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVRNGPDVHPGANF
IQQRHMQMKRFLKYGNREKMAQELKFGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKIKVRLPPPTILKPVTLWTGKQI
FSVILRPSDDNPVRANLRTKGKQYCGKGEDLCVNDSYVTIQNSELMCGSMDKGTLGSGSK
NNIFYILLRDWGQNEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLTM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIKAVYPCQSEPALSKNDLTLTTEAIMKKSEFLC
CQDSFLQEIKTFIKGVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITPTQIEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKAI
STPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICTSKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYVLQFLKEDLPKVV
VQGIPEVSRAVIHIDEQSGKEKFKLLVEGDNLRAVMATHGVKGTRTTSNNTYEVEKTLGI
EAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKANRDPKPPRRPLIFD
THEFHIPLVT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttccgcgagacggatgtggctaagaaaataagccatatctgtttt
ggaatgaagtcccctgaggagatgcgccagcaggcacacatccaggttgtcagtaagaac
ctgtacagccaagacaacaaccatgcccccttgttgtatggagtgcttgaccatagaatg
ggtacaagcgaaaaggatcgtccttgtgagacctgtgggaagaacttggcggactgtctt
ggccactatgggtacattgaccttgagctaccgtgctttcatgttgggtacttcagggct
gttattggcatcttacagatgatctgcaaaacctgctgccacattatgctgtcccaggaa
gagaagcagcagtttgtggattttctgaagaggccaggccttacctacctgcagaagcga
ggcctgaagaagaagatctcagataagtgccggaagaaaagcacttgtcactactgtggg
gcctttaatggtaccgtaaagaaatgcggcttactgaagataattcatgaaaaatacaag
acaaacaaaaaagtcgtggatcccattgtatcaaacttcctgcagtcctttgagacagcc
attgagcataacaaagaggttgaacccctgctgggaagggcccaggagaacttgaatccc
ttagtagttctgaacttgtttaagcgcatccccgctgaagatgtcccgttactcctgatg
aacccagaatctggaaagccctctgatttgattctcacccgacttttggtgcctcccctg
tgtatcagaccttctgtcgtgagtgatttgaagtctggaaccaatgaagatgacctgaca
atgaaactgacagagatcattttcctaaatgacgttattaaaaagcaccggatctccgga
gccaagacacagatgatcatggaggactgggatttcctgcagctgcagtgtgccctctac
atcaacagtgagctctctggcatccccctcaacatggcacctaagaagtggacgcgaggc
tttgtgcagcgcctgaaggggaaacagggtcgatttagaggtaatctgtcagggaagagg
gtggatttctccggccgaacagtcatctcacctgaccccaacctccggattgatgaagtc
gccgtgccagttcatgtggccaaaattctaacttttcctgagaaggtgaacaaagcaaac
atcaattttttgaggaaactggttcgaaatggcccggatgttcacccaggagccaatttc
atccaacaaagacacatgcagatgaagaggttcctgaagtatggaaatcgggaaaagatg
gctcaggagctcaagttcggcgacattgtagagagacacctgatagatggagatgtggtc
ttgttcaaccggcagccttccctgcacaaactgagcatcatggcccacctggccagggtc
aagccccaccggaccttcagattcaatgagtgtgtctgcaccccctacaatgcagacttt
gatggggatgaaatgaaccttcatcttccccagacagaggaagccaaagcagaggccctt
gttctcatggggaccaaagcgaaccttgtaaccccacgaaatggggagccactcattgct
gccattcaggacttcttaacaggtgcttacctcctcaccctcaaggacactttctttgac
cgagccaaggcttgccagatcattgcttcaatactggttggcaaagatgaaaaaattaaa
gtgcgcctcccaccccctacaatactaaagcctgtcaccctgtggaccggaaagcagatc
ttcagtgtcatcctcagacctagtgatgacaatccagtgagggccaacctccgaaccaag
ggcaagcagtactgtggcaagggggaagacctctgcgtcaacgactcctatgtcaccatc
cagaacagtgagttgatgtgcggcagcatggacaaagggaccctggggtcagggtccaag
aacaacatcttctacatcttgctacgagactgggggcagaatgaggctgccgatgccatg
tctcggcttgccaggctggctcctgtctacctgtctaaccgtgggttctccatcgggatt
ggtgatgtcactcctggccagggactgctgaaagccaagtatgagctactaaatgctggc
tacaaaaaatgcgacgaatacattgaagccctgaacacaggcaagctgcagcagcagcca
ggctgcacggctgaggagacgcttgaggctctgatcctgaaggagctgtccgtgatccgg
gaccacgctggcagtgcctgcctccgagagctggacaagagcaacagtcccctcaccatg
gccctgtgtggctccaaaggttccttcattaacatatcacagatgattgcctgtgtggga
cagcaagccatcagtggctcccgggttccagatggctttgagaacagatctttgcctcac
tttgagaagcattcaaagctccctgctgccaagggctttgtggccaatagcttttactct
ggcctaacgcctactgagtttttcttccacacaatggctggtcgggagggtctggtggac
acagctgtaaagactgctgaaacaggatacatgcagagaagactggtcaaatccctggaa
gacctctgctcccagtacgatctgacagtgcggagttccaccggtgacatcatccagttc
atctatggaggagatggcttagatcctgctgccatggagggcaaagatgaaccgctggag
tttaagagggttctggacaacatcaaggcagtgtatccatgtcagagtgaacctgctctc
agtaagaacgacctcaccttgaccactgaggccatcatgaagaagagtgagttcctatgc
tgccaagacagcttcctgcaggaaataaaaacattcattaaaggggtgtccgagaagatt
aagaaaaccagagataaatatgggatcaacgataatggcacaacagagcctcgtgtgctg
taccagttggaccgtattacccctacccaaatagagaagtttctggagacctgtagggat
aagtatatgagagcacagatggagccaggctctgcagtgggtgcactctgtgcacagagc
attggtgagcccggtacccagatgactctgaagacattccactttgcaggagtggcctcc
atgaacatcaccctgggtgtgcctcggatcaaagagatcatcaacgcttccaaggccatc
agcactccgattatcacagcacagctagacaaggatgacgatgcggattatgcacgcctg
gtgaagggcagaattgagaaaaccctcctgggggagatctcagagtacattgaagaagtg
tttcttcctgatgactgctttattcttgtcaagctctccctggaacggatccgacttctg
agactggaggtcaatgctgagacagtgcggtactccatctgcacatccaagctccgagtg
aagcctggtgatgtggccgttcatggggaggctgtggtgtgtgtcacccccagggaaaac
agcaagagctccatgtattatgtgctgcagtttttgaaagaggatctgcccaaggtggtg
gtacaaggcatcccagaggtgtcgagagctgtcatccatattgacgagcagagtgggaag
gagaagttcaagcttctagtagaaggtgacaacctgcgggcagtcatggccactcacggt
gtgaaaggcacccgaaccacttctaataacacctatgaggtggaaaaaaccctgggcatt
gaggctgcccggacaactatcatcaacgagatccagtacacgatggtcaaccatggcatg
agcatcgacaggaggcacgtgatgctgctctctgacctgatgacctacaagggtgaagtc
ctgggtataaccaggtttggcctggccaagatgaaggagagtgtgttgatgctggcctcc
tttgaaaagacagctgaccatctctttgatgctgcctactttgggcagaaagactccgta
tgcggtgtgtctgagtgcatcatcatgggaatcccaatgaacatcggaactggtctcttc
aagctgttacacaaagccaacagggacccaaaaccacccaggagacccctgatatttgac
acacatgaattccacatccctcttgtcacatag
DBGET
integrated database retrieval system
