Mus pahari (shrew mouse): 110325385
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Entry
110325385 CDS
T05929
Symbol
Pde12
Name
(RefSeq) 2',5'-phosphodiesterase 12
KO
K19612
2',5'-phosphodiesterase [EC:
3.1.13.4
3.1.4.-]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110325385 (Pde12)
03029 Mitochondrial biogenesis [BR:
mpah03029
]
110325385 (Pde12)
Enzymes [BR:
mpah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
110325385 (Pde12)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
110325385 (Pde12)
Mitochondrial biogenesis [BR:
mpah03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
110325385 (Pde12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDE12-like_N
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
110325385
NCBI-ProteinID:
XP_021059009
Ensembl:
MGP_PahariEiJ_G0030049
LinkDB
All DBs
Position
8:complement(17899651..17905268)
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AA seq
608 aa
AA seq
DB search
MWRLPGRSALRGVRSVVERRSRAEAGTHEAGRAMERAVVRCVPSEPKLSLSFALADGSHK
NMQRDQSEPLGRVLSRIATNALKGHAKVAAAKKSRKNRAHSSGGAACAATGPEPVATCEP
VVKLYYREEAVAEDVLNVDAWQDGAVLQIGDVKYKVERNPPTFTELQLPRYIMAGFPVCP
KLGLEFGDPASSVFRWYKEVKPGAAEPGDSGPASSSHSSQPPAWIETGVDERVYTPCNGD
IGLRLRLHCTPGNGQRFGPSRELESLCPVEAGPGTCTFDHRHLYTKKVTGDSFIRTVSYN
ILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDRAVFSDSL
VPALEAFGLEGVFRIKQHEGLATFYRKSKFRLLSQHDISFQEALKSDPLHKELLEKLALN
PLAQEKVLQRSSVLQISVLQSTTDSSKKICVANTHLYWHPKGGYIRLIQMAVALVHIRHV
SCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGDEERCSMSLTHGFTLQ
SACGEPAYTNYVGGFHGCLDYIFIDINTLEVEQVIPLPSHEEVTTHQALPSVSHPSDHIA
LVCDLKWK
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggctccctggccgcagcgcgcttcgtggggtccggtcggtggtggagcggcgc
agccgggccgaggcagggactcacgaggcggggcgcgccatggagcgcgcggtggtgcgc
tgtgtgccctcggagcccaagctcagcctgtccttcgccttggccgacggcagccacaaa
aacatgcagcgggaccagagcgagcctctgggccgggtcctcagccggatcgctaccaac
gccctcaagggacacgcaaaggtagcggccgccaagaagagcaggaaaaaccgagcccat
tcgagcggcggcgcggcctgtgcggcgacagggcctgagccggtggcgacctgcgagccg
gtggtgaagctctactaccgggaggaggcggtggccgaggatgtgctcaatgtggacgcc
tggcaggacggagcggtgctgcagatcggcgacgtcaagtacaaggtggagcgcaacccg
cccaccttcacggagctgcagttgccgcgctacatcatggctggcttccccgtgtgcccc
aaactcggcctggaatttggggatcccgccagctccgtgttccgctggtacaaggaagtc
aaacccggggcggcagaacccggggacagcggccccgcgtcctcgtctcactcttcgcag
cctccagcttggattgaaaccggtgtggacgagcgcgtctacaccccgtgcaatggtgac
atcggactccggctccggcttcactgcacgccaggcaatgggcagcgcttcgggccaagc
cgcgagctagaaagcctgtgcccggtggaggccgggcctggcacctgcacttttgaccat
cgacatctgtacaccaagaaggtgacaggggactctttcatccgcactgtctcgtataac
atcctggcagacacttacgcccagactgagttctctcggacagtcctgtacccgtactgt
gccccctacgccctggagcttgactaccgccagaacctcatacagaaggagctcacaggc
tacaacgcagacctcatctgtttgcaggaggtggaccgcgcggtgttctcggacagcttg
gtgccggccctggaggccttcgggctggagggcgtgttccgaatcaagcagcacgaaggc
ctggccactttctaccggaagtcgaagttcaggctccttagtcaacatgacatctctttt
caagaagccctcaagtcggacccactgcacaaagaattgctagagaaactggctctgaac
ccattagcacaggagaaggtcctccagagatcgtccgttcttcagatttcagttcttcag
tctacaacggactcttctaaaaagatatgtgttgctaatacccacctctactggcaccca
aaaggtggatacattcgtctcattcaaatggcagtcgccttggttcacatcagacacgtc
tcgtgtgatctctatcctggcataccagttatattttgtggagactttaatagtacacca
tcaacaggcatgtatcattttgtcatcaatggcagcatcccagaggatcacgaggactgg
gcttccaatggggacgaggagagatgcagcatgtctctcacacacggtttcacactgcag
agtgcttgtggtgaacctgcgtacacaaattatgtcggtggctttcacggatgtctagat
tacattttcattgacataaatactttagaggttgaacaggtgattccattacctagtcat
gaagaagttactacccaccaggccttacctagtgtttctcatccttctgatcacatagca
cttgtatgtgacttaaaatggaaatag
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