Mus pahari (shrew mouse): 110325549
Help
Entry
110325549 CDS
T05929
Symbol
Spata13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
110325549 (Spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110325549 (Spata13)
Membrane trafficking [BR:
mpah04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
110325549 (Spata13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
RHG20_PH
Myosin_TH1
Motif
Other DBs
NCBI-GeneID:
110325549
NCBI-ProteinID:
XP_021059265
Ensembl:
MGP_PahariEiJ_G0030394
LinkDB
All DBs
Position
8:51652833..51783209
Genome browser
AA seq
1249 aa
AA seq
DB search
MTTAQDGHGQGATATCSASNPKAPKMVTSSACQNGGCKGSPSSDPEAGEARLSPSKLVRL
FSGSRKRMNSNTERPRSVVLVGNSSTWNALASFRKMGSFKRLKSSVLQGIQNREGADVSK
EEPAGDPGRAAPNGTIAVLGKGLGRCTSLGPLGDGAGSDCSDPEDTEDAFQRSTHRSRSI
RRAYGLGRISLLDLGRQPVPEPAVCEIQVRDPEPSRAVPLPRRSKSIDSLSVLKSSFKRK
SASNLTELQGDRQVPPRTLSSFFTDPEKPGGSERRTRRWRSPIRAKDFDRVLRLVSNVKD
AAWKREAPRSAAPSPGPGPGDANPLHAPRSKLHDDYSRRTSSSVESDARRGGSLSSPCIP
APCSAAPYAAPEPHLDVDTAVFPLETKSAQPLGNDGTRASSPSPIPTDPEGLSQGSSEAH
TGSQHPFDPVQLPTPLRPTTPKPQSPQSPGSTKCPSSLSVLSLSSADSEERTEDASHRQP
GPVSLQDTVLTTAGDVGGESSDSYFPENLDGATNPEEKKGEVRVTVTEDDWRQGSALEEE
QNEAPRISRRRWGSGRRTRPRPLSDYGQLAGRSLSIPEDAIAADPPDEDHVDRMHPESVT
TTSQDPCAPSGSSRGGRRRRPISVIGGVSFYGNTQVEDVENLLVQPAARPPVPAHQVPPY
KAVSARLRPFTFSQSTPIGLDRVGRRRQMKTSNVSSDGGAESSALVDDNGSEEDFSYEVL
CQANPRYLQPGGEQLAINELISDGSVVCAEALWDHVTMDDQELGFKAGDVIQVLEASNKD
WWWGRNEDKEAWFPASFVRLRVNQEELPESCSSSHGEEQDEDTSKARHKHPESQQQMRTN
VIQEIMNTERVYIKHLKDICEGYIRQCRKHTGMFTVAQLATIFGNIEDIYKFQRKFLKDL
EKQYNKEEPHLSEIGSCFLEHQEGFAIYSEYCNNHPGACVELSNLMKHSKYRHFFEACRL
LQQMIDIALDGFLLTPVQKICKYPLQLAELLKYTTQEHGDYNNIKAAYEAMKHVACLINE
RKRKLESIDKIARWQVSIVGWEGLDILDRSSELIHSGELTKITRQGKSQQRIFFLFDHQL
VSCKKDLLRRDMLYYKGRMDMDEVELVDVEDGRDKDWSLSLRNAFKLVSRATDEVHLFCA
RKQEDKARWLQAYADERRRVQEDQQMGMEIPENQKKLAMLNAQKAGHGKSKGYNSCPVAP
PHQSLPPLHQRHITVPTSIPQQQVFALAEPKRKPSLFWHTFHKLTPFRK
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagcccaggatggccatggacaaggtgccaccgccacttgttcagcctccaac
ccgaaggcccccaaaatggtgacatcctcagcatgtcagaatggaggctgcaaaggcagc
cccagcagtgatcccgaagccggggaagccaggctcagcccatccaagctggtacgtctc
ttctctggtagtcggaagaggatgaattcgaacactgagaggcctcgctccgtggtcctt
gtggggaattcctccacgtggaatgccctggcctccttccgtaaaatgggctcttttaaa
agactaaaatcttctgtccttcaaggaattcagaaccgggagggggcagacgtttccaag
gaggagccagcaggagacccaggaagggctgctcccaatggcaccattgccgtcctggga
aagggcctgggcaggtgtacatccttgggccctctaggagatggtgctgggtccgactgt
tcagaccccgaggacacggaggacgccttccagaggagcacacaccgttcgcgcagcatc
cgcagggcctatggcctgggccgcatcagcctgctggacctggggcgccagccagtgcca
gagcccgccgtgtgtgagatccaagttcgcgaccctgagcccagcagggctgtgcctctg
ccgcgcagaagcaagagcatcgacagcttgagcgtcctgaagagctccttcaagcgcaag
tctgcatccaatctcacggaactgcagggtgacaggcaggttccccccaggaccctgagc
agcttcttcacagaccccgagaagcccggtggctcagagagaagaaccagacgctggagg
agccccatccgggctaaggacttcgacagagtcctaagactggtgagcaatgtcaaggat
gcagcttggaagagggaggcccccaggagtgcagcccctagccctggtcccggtcccggg
gatgcgaacccactacatgcgccaagaagcaagctacacgacgactactcgcgccgtacc
agcagcagtgtggagtcagatgccaggcgtggcggctctttgtcctcaccctgcatccct
gcaccatgctccgctgcgccctacgcagctccggagccccacttagatgtggatactgca
gtattccccctggaaactaaaagtgctcagccactgggaaatgatggaactcgtgccagc
agtccctcaccaatccccacggacccagaaggattaagccaaggctccagtgaggcacat
actggcagccagcatccctttgaccccgtgcagcttcccactcctctgagacccaccaca
cccaagccccaaagtccccagagcccagggagtacaaagtgccccagtagtctgagtgtg
ctgtccctcagttcagcggacagtgaagaacggaccgaggatgcttcgcacaggcaaccg
ggacctgtgtccctccaggatactgtcctcaccaccgctggtgatgtggggggagaaagc
agtgacagctattttcccgagaatctcgatggcgccaccaatccagaagagaagaaggga
gaggtacgggtcacggtgactgaggatgactggcgtcagggctcagccctggaggaggag
cagaatgaggcgcctcgtatctccaggaggaggtggggctcagggcggcgcactcggcca
cgaccactgtctgactatggccagctggctggcagaagcttgtccattcctgaagatgcc
attgctgcagaccctccagatgaggaccacgtggacaggatgcatccagagagtgtgacc
accaccagccaggatccatgcgccccctcaggctcttccagaggaggcaggagaaggaga
cctatatctgtgattggaggggtcagcttctatggcaacacccaggtagaggatgtggag
aacctcttggtccaaccagcagccaggcctcctgtgcctgcacaccaagttccaccctac
aaggctgtgtctgcccgcctccggcccttcaccttctcccagagcacccccataggattg
gaccgagtggggcggcgacggcagatgaaaacatccaatgtctcttcagatggaggtgcg
gagtcttcggccttagtggatgataatggtagtgaggaagacttcagctatgaggtgctc
tgccaggccaaccctcggtacctgcagccaggaggggaacagctggccatcaatgagctc
atcagcgatggcagcgtggtctgtgcagaagcactgtgggaccatgtgaccatggatgac
caggaactgggcttcaaggctggggatgtcatccaggttctggaagcttctaacaaggac
tggtggtggggccggaatgaagacaaagaggcttggttccctgcaagctttgttaggctt
cgagtcaatcaggaggagctgcccgagagctgcagcagctcccacggggaggagcaggac
gaggacaccagcaaagcccgccacaagcacccggagagccagcagcagatgcggaccaac
gtcatccaggagatcatgaacaccgagcgagtgtatatcaagcacctcaaggacatctgc
gagggctatatccgtcagtgtcgtaagcacacgggaatgttcaccgttgctcagctagcc
actatttttggaaacattgaagacatttacaaattccaaagaaagtttctgaaagacctt
gagaaacagtacaacaaagaggaacctcacttgagcgaaataggatcctgctttcttgag
caccaagagggctttgccatctactctgagtactgcaacaaccacccgggcgcctgcgtg
gagctgtccaacctcatgaagcacagcaagtatcggcacttcttcgaggcctgccgcctg
ctccagcagatgatcgacatcgccctggatggcttcctcctcacacctgtgcagaagatc
tgcaaatacccactgcagctggctgagttgctcaagtacaccacacaggagcacggcgat
tacaacaatataaaggcagcctatgaagccatgaagcacgtggcctgcctgatcaatgaa
cgcaagcgcaagctggagagcatcgacaagatcgcccgctggcaggtgtccatcgtaggc
tgggagggcctggacattctagaccgaagctccgagttgattcattccggagagctgacc
aaaatcaccaggcagggcaagagccagcaacgcatcttcttccttttcgaccaccagctg
gtgtcctgcaagaaggacctgctgcgcagggacatgctgtactacaagggccgcatggac
atggacgaggtggagcttgtggatgtggaggatgggcgggacaaagactggagcctcagc
ctacggaatgccttcaagctggtcagcagagccacggatgaggttcatctgttctgcgcc
agaaagcaagaagacaaggccaggtggctgcaggcctatgcggacgagaggcggcgggtg
caggaggaccagcagatgggaatggaaatcccagaaaatcagaagaaactcgccatgttg
aacgctcagaaggcaggacatgggaaatctaaaggctacaacagctgtcctgtggcccca
ccccaccagagtctgccgccccttcaccagcgccacatcactgtgcccaccagcatcccg
cagcagcaggtctttgccttggctgagcccaagaggaagccatcgctattctggcacact
ttccacaaactcacccccttccggaaatga
DBGET
integrated database retrieval system
