Mus pahari (shrew mouse): 110325655
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Entry
110325655 CDS
T05929
Symbol
Rpgrip1
Name
(RefSeq) X-linked retinitis pigmentosa GTPase regulator-interacting protein 1 isoform X1
KO
K16512
X-linked retinitis pigmentosa GTPase regulator-interacting protein 1
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mpah03037
]
110325655 (Rpgrip1)
Cilium and associated proteins [BR:
mpah03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
110325655 (Rpgrip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPGR1_C
C2-C2_1
C2
C2_C2CD3_N
CDC45
Motif
Other DBs
NCBI-GeneID:
110325655
NCBI-ProteinID:
XP_021059443
Ensembl:
MGP_PahariEiJ_G0030257
LinkDB
All DBs
Position
8:43317781..43369938
Genome browser
AA seq
1334 aa
AA seq
DB search
MQHLLDYMPEDLPVRDTDSSPLLKGTSGKNVKTQPHLDRMNQKELNYRRFHLHEEPMLVK
ELSPKQRDKSRRRRTNVQRSTTTQPDLRTLGVLQEPARRRRSWVSASPRPSAPLRSPVPG
RKAHVQRQCPSTAVGGAQPRVHAGGRLPHTPGPNGRRSHTAPPAFKEYVMDKTTRIEITS
EPSQLTHIMTTDSTHVEEIPRSPEKTSKVEKLEQRSSQERTQKAAELRASIKENVELIRL
KKLLYERSTSLAATEAQLTRVQEAYEDLLQKNQGMLDTAHNAFLSQVNELKAELSEESKK
AVSLKTQLGDVSILQITLKEFQVRVEDLEKERKLLSDSYDRLLENMLDSSHQPLDSSHQS
HWSKELTGEQFPPQVCPLLDQMGAALEETKVLLQATNKEAQDGKLKFQDTNILYQHEQEE
ENLQSTATVPPSPEELSELAAQATLLPQTDQRESNEPKAQDKNDLSQVLSELQVSHAETA
LELEKTRDMLLLQRKINMCYQEELEATLTKADRENRDHEEKLERLTHLLDFKNSRIKQLE
GILRSHGLPTSEQLKDIAYGTRPPSLCLESLAAHRDEDEVDMSLLHPSENLFELHIHQAS
LTPAALIQAGDTQPTTFCTYSFYDFETHCTPLSTGPQPLYDFTSQYVVQTDYLLLHYLQG
SSVRLDLHQAMASEHHVLATGWISLDKVLGTVERVHGSATLAGKSGEDLGVLEYWMRLCL
PLKPSLQACSKRKQAQAYLSVSVLGAQKAQSDESRSKTWAPQNELRIEITRCCGLRSRRL
GRQPSPYVMYRFFTFPDHDTTIIPASSNPYFKDQALFPVLVTSDLDQYLRREALSVYVFD
DEDPEPGSYLGRAQVPLLPLAQNKSIKGDFNLTDSGEKSNGSIKVQLDWKSHYPPPEGFQ
MPEAEKQEGEEKEEEGGEEEVKEEEVEEEEEEEEEEEEEEEEEDEVEEEKEEEKKEEKEE
EEEKEKEEEKEEEEEEEEEKKEEEKEKEEENKNVLEASFMEEWASFLPQDQIASTEIPIE
ADQYQEKRKPPVIAEKKEKEHQVASYSRRKHSKRPGVQGKNRMEYLSCNILNGNTQQMQY
REWKFSGLKKAEDGGLKVQDKREERPSPCSALRQEHPSHPRNAFSLAEQESCEQASEVSE
TQTPDSDDIIVTPQAQTFPKADSEKMCIEIVSLAFCPEADVMSDETIRQVYVEYKFCDLP
LSETETPMSLRKPRAGEEIHFHFSKVIDLDPVEHQSRRQFLFAMLHAQDSDEGRLKFTVV
SDPLDEERKECQDIGYAYLELWQIFQSGKDILEQELEIVSPGNQAIQIGRLKVSLQAAAA
LHGIYKEMTEDLFS
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatctactagattacatgccagaggatctgccagttagagacacagattcgagt
cctctgttgaaagggacttcaggtaagaatgtaaagacccagccacacttggacaggatg
aaccaaaaggaactgaactacagacgctttcacctccatgaagagcccatgttggtgaag
gaactttctccaaagcaacgagataaaagcagaaggcgaaggacgaacgtgcagcgttcc
accactacccaaccggacctacggacacttggtgtgctccaggagcctgcgaggcgcagg
cggtcgtgggtctcagcatccccgcgcccctcggcgcccctgcgttccccggttccaggg
aggaaagcgcatgtgcagcgccagtgtccctcgactgcggtaggcggtgcacagcctcga
gtccacgcaggaggcagactcccccacacacctgggccaaatggcaggcgcagccataca
gcccctcctgcatttaaagaatacgtgatggacaaaaccaccagaatcgaaataaccagt
gagcccagtcaacttacccacattatgactactgattctacacatgtggaagagatcccc
agatctcctgagaaaacatccaaagttgaaaagcttgaacagagaagctcacaggagcgc
actcagaaggctgcagagcttcgagcttccattaaggagaacgtggagctgattcgcctt
aagaagctcttatacgagaggagtacctcgctggcagccacagaagcccaactgactcgc
gtgcaagaggcatatgaagacttgcttcagaagaatcagggaatgttggatacagcccat
aatgccttcctcagccaagtgaatgagctcaaggcagagctgagtgaagagagcaagaag
gctgtgagcttgaagacccagctgggagatgtgtctatcttgcagataactctgaaggag
tttcaggtcagagttgaagatttggaaaaggaacgaaaactgctgagtgacagttatgac
agactcttagagaacatgctggatagcagtcatcagcctctggatagcagtcaccagtcc
cattggagcaaggagctcacaggggagcagttcccaccgcaagtctgtccactgctggac
caaatgggcgctgcgctggaggagaccaaagtcttgcttcaagcaaccaacaaagaagct
caagatggaaagctgaagtttcaagacaccaacatcctttaccagcatgaacaggaagaa
gagaacctacagtcaacagccactgtacccccatctccagaagagctgtctgaactggct
gctcaggccactctactcccacagacagatcagagagagtccaatgaaccaaaagctcaa
gacaagaatgatctatcccaggtgctaagcgagctgcaagtgtcacatgcagagaccgca
ctggaactggaaaaaaccagagacatgcttcttctgcagcgtaaaatcaacatgtgttat
caggaggagctggaggcaacgctgacaaaagcggacagggaaaacagggaccacgaagag
aagctggagaggctgactcacctcctagacttcaagaacagccgcataaagcagctggaa
ggtattttaagaagccacggccttccaacatctgagcagctcaaagacatcgcgtatggc
actcggccaccgtcgctgtgtctggagtccctggcagcccacagagatgaggatgaagtg
gacatgtctctgctgcatccaagcgagaatctttttgagctgcacatccaccaggcctcc
ctgacccctgctgccctcatacaggctggcgacacccaacctaccactttctgcacttat
tccttctatgattttgaaactcactgcaccccactctctactgggccccagcccctctat
gacttcacctcccagtatgtagtgcagacagactacctcctcctgcactaccttcaagga
tcttcagtacggcttgatctccatcaggccatggctagtgagcaccatgtccttgctact
ggatggatctcacttgacaaggtgctagggaccgtggagagagtccacggctcggccaca
cttgctggtaagtctggtgaagacttgggggtgttagaatactggatgaggctgtgcttg
cccctaaaacccagcctccaggcatgcagtaagcgaaagcaagcccaggcctacctgtca
gtcagtgtgcttggcgctcagaaggcccagagtgatgagtccagatccaaaacctgggca
cctcagaatgagcttcggattgagatcaccaggtgctgcggcctccggagtcgacgtctg
ggaaggcagcccagtccgtatgtcatgtaccgcttcttcacctttcctgaccatgacacc
accatcattccggccagcagcaatccatactttaaagaccaggctctgttccccgtgctt
gtgacctctgacctggaccagtatctgaggcgggaagctctgtctgtctatgttttcgat
gatgaagacccagagcctggctcctatcttggccgagcccaggtgcccttgctgcctctt
gcacaaaacaaatctatcaaaggtgatttcaatctcacagactctggggagaagtccaat
ggatccatcaaagtgcaactagactggaagtctcactacccacccccagagggcttccag
atgccagaagctgagaagcaggagggtgaagagaaggaggaggaagggggagaggaggag
gtaaaggaggaagaggtggaggaggaggaggaagaggaagaagaggaagaagaggaagaa
gaagaggaagacgaggtagaggaagagaaggaggaagagaagaaggaagagaaggaggag
gaggaggagaaggaaaaggaggaggaaaaggaggaggaggaggaggaggaggaggagaag
aaggaggaggagaaggagaaggaggaggagaacaaaaatgtcctggaggcttcattcatg
gaagaatgggcctcttttcttccccaggaccagatagcatctacagagattcccatagag
gctgaccagtaccaagagaagagaaaacctcctgtaatagcagaaaagaaggaaaaagag
catcaggtcgcaagctactcacgaagaaaacacagcaaaagaccaggtgtccaaggcaag
aacagaatggagtatctgagctgtaacatcttgaatggaaacacacagcagatgcagtac
agggagtggaagttctcagggctcaagaaggccgaggatggtggtttgaaagttcaggac
aagagagaggaacggccatcaccctgttcagcactgagacaggagcatccttcacatcct
agaaatgccttctccctagcagaacaggaatcctgtgaacaagcttctgaagtcagtgaa
acacagactcccgacagcgatgacatcatagtgacgccccaggctcagacatttcctaaa
gccgattcagagaagatgtgcattgaaatcgtctccctggccttctgccctgaggctgac
gtcatgtcggatgagactatccggcaggtctatgtggagtacaaattctgtgatctgcct
ctatcagagacagagactccgatgtcactgaggaaaccaagggcaggcgaagaaatccac
ttccactttagcaaggtgatagatctggaccccgtggagcaccaaagccgaaggcagttt
ttgtttgccatgctacatgctcaagattctgatgagggacgtttaaagtttacagtggta
agtgatcctctggatgaagaaagaaaagaatgtcaagatataggctatgcataccttgaa
ctgtggcagatatttcaatctggaaaagatatcctagagcaagaactggagattgtgagc
cctggaaaccaggccatccaaattggaaggctgaaggtttccctccaagcagctgctgcc
ctccatggcatttataaggagatgactgaagatctgttttcatga
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