Mus pahari (shrew mouse): 110325755
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Entry
110325755 CDS
T05929
Symbol
Srcap
Name
(RefSeq) helicase SRCAP isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110325755 (Srcap)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpah03036
]
110325755 (Srcap)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
110325755 (Srcap)
SWR1 complex
110325755 (Srcap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
110325755
NCBI-ProteinID:
XP_021059525
Ensembl:
MGP_PahariEiJ_G0013714
LinkDB
All DBs
Position
1:96996043..97044320
Genome browser
AA seq
3258 aa
AA seq
DB search
MQSSPSPAHPQLPILQTQMVSDGMTGSNPVSPASSSSPDSSGAGGISPQHIAQDSSLDGP
PGPQDGTTVPLEGFSLSHAADLVNRGQKWEKSHAEIAEQAKHEAEIETRIAELRKEGFWS
LKRLPKVPEPPRPKGHWDYLCEEMQWLSADFAQERRWKRGVARKVVRMVIRHHEEQRQKE
ERARREEQVKLRRIASTMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQT
EKYSDLLSQSLNQPLSSSKAGSSPCLGSSSAASSPPPPVSRLDDEDGDFQPQEEEEEDDE
ETIEVEEQQEGNDAETQRREIELLRHEGELPLEELLRSLPPQLLGGPFSPSQTPSHDSDT
QDGPEENIEEEPSQDLEVHPPPSAVTQCNKKRWRPDEDDEEFTANEDEAEDEEDTIAAEE
QLEGEVDHAMELSELAREGELSMEELLQQYAGAYACDASAPGSGDSEDEDEVEANSSDGE
LEETVEEAAQEDSSQSDSAEECSEDEEDEHSEEEMSESSQSEESESDESEDAQSQSQADE
EKEDEGDDADDDDDDDDFGVEYLLARDDERSEVDGGSGPPTPGPTTTLGPKKEITDIAAA
AESLQPKGYTLATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKT
IQTISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQ
GWTKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRR
LLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLH
KVLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFMSV
INILMQLRKVCNHPNLFDPRPVTSPFITPGICFSTASLVLRATEIHPLQRIDMGRFDLIG
LEGRVSRYEADTFLPRHRLSRRVLLEIATAPDPPPRPKPVKMKVNRMLQPVPKQEGRTVV
VVNSPRAPLGPVPVRPPPGPEVSVQPALGPVPPVLPAPLMVSASPAGTPVVPASRPPGPV
LLSPLQPNTGPLPQVLPSPVGVMSGTSRPPTPTLSLKPAPPAPVRLSPAPPPGSSNLLKP
LTVPPGYTLSPVAATTTSSAIATVTTTAVPAPNSTPQRLILSPEMQARLPSGEVVSIGQL
ASLAQRPVTSAGGSKPLTFQIQGNKLTLTGAQVRQLAVGQPRPLQRNVVHLVSAGGQHHL
ISQPAHVALIQAVAPTPGPTPVSVLPSTPSTTPAPTGLSLPLAANQVPPSMVNNTGVVKI
VVRQAPRDGLTPVPPLAPAPRPSSSGLPAVLTSRPTLTPSRLSSPTLGTTRTPIPTPTLV
RPLLKLVHSPSPEVSASAPGAAPMTISSSLHMPSSLPGPTSSPMTIHNSSPLSSPVSSTV
SVPVSSSLPISVPTALPVPTSAPLPIPITAPLPVSDLGPALLTSVTPALAVVSAASGPPL
ASAGVSPSMSALALGLATTPALSPPQTSGHSLLLATTSSHVPGLNSAVAPACSPVLVPAS
ALTSPFPVSPSSAPAQASILAAAPSTSQALATSLAPMAASQTAILGPSPTPPLAPLPVLA
ASQTPLPAMTPPSMSGTPLPSSSLVSAPTSVLAPSSTQTLVSTPVSSPLSSLASTQTLTL
APTLAPTLGGLSPSQTHSLGTGSPQGPFPIQTLSLTPASSLVPTSAQTLSLAPGGPVGPT
QTLSLAPVPPLAPSSPVGSAPAHTLTLAPAASSASLLVPTSVQTLTLSPGPVPVPTLDLS
ATQTLALAPAFTQAPTSQASSLVSASGAASLPVTMVNRLPVPKDEPETLTLRSGPPSPLP
TATSFSGPRPRRQPPPPPRSPFYLDSLEEKRKQQRSERLERIFQLSEAHGALAPVYGTEV
LDFCTLPQPVASPIGPRSPGPSHPIFWTYTEAAHRAVLFPQQRLEQLSEIIERFIFVMPP
VEAPPPSLHACHPPPWLAPHQAAFQEQLACELWPRARPLHRIVCNMRTQFPDLRLIQYDC
GKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALM
ERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVH
IYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIRELFDMPLEEPPGSSV
SSVPEEEEEAVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNENDGFPAGEG
EEASRPGPGAEDEEMSRAEQEIAALVEQLTPIERYAMKFLEASLEEVSREELKQAEEQVE
AARKDLDQAKEEVFRLPHEEEEGTGAGDEMSCGTSGVSHRRSKKIRAPERLGTRVSERLR
GARSETQGANHTPVTSSSNHTCNTFVPPQCSPVRERIPRPVPRPRPPAAPSAPAPSPAPS
PPPSPPPAPPPAPPPAPAPAPAPLPPAPAASVASAITSALATAPIPISAPNPVTILPVHI
LPTPTPLLQLPPCSSPASTPPSACTPLPTCTPLLAQTSVLTSSSPTPLDSLSVPISPGVT
NLPLDSGEVQELAPVESLELPGMTSSEASLASLVPPKDLLPVAVDILPESEKTLPYIPVP
SSTLEAESIPNGQQQEVPGPVEGTNTTLLPGSEELTMSLNESNGLELPPSAASNEPLHEL
LETHRNLEETREVQIPVSNSEKPQELVRAEVTAPSTSSSATSSPEGPLPARPPRRRTSAD
VEIRGQGSGRTGQLPGPKVLRKLPGRLVTVVEEKELVKRRRHRAPASTLVPGVSEVSASP
RSPSIHSMSGPESSPPSSGPCEAVPTSSLSTPTQHTFIACHHNELGMTGGGSPENGEGTE
LAITPPAVKRRRGRPPKKNRSPADAGRGVDEVPSTISKGKTNGVDPVPGPETVTVAEPDL
KPQFVPGPQPPGPQPVHRPEPTILSPVEKRRRGRPPKARDLPIPGTISSPGDGNLESRTQ
PLPFPAPLTPLLACPTAVTNTVTTVTISTSPPKRKRGRPPKNPPSPRPSQHPVLDPDSSS
VLESCGLGVQRQPLGQAESEGSSSDEDGSRPLTRLARLRLEAEGMRGRKSEGSMVMAVIQ
DDLDLADSGPTGLELTPPVVSLTPKFRSTRLRPGSLVPPLETEKMPRKRSGAPVGSTGMA
KRGRLQPPSPLGPEGSVEESEAEASGDEEEGDGTPRRRTGPRRLVGTTNQGDQRILRSSA
PPHLSIPTISHRGRKAKT
NT seq
9777 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcagcccctcccctgctcatcctcagctcccaatcctacagacacagatggtg
tcggacggcatgacaggtagcaatcctgtgtcccctgcctcatctagttctccagattct
agtggggcaggaggcatctccccccaacatatagctcaagattcctcactggatggacct
ccaggcccgcaagatggtaccacagttcctctggaggggttcagcttatcccatgctgct
gacctggtcaacaggggtcagaagtgggagaagagccatgcagaaattgcagagcaagcc
aaacatgaagccgaaattgaaactcggattgctgaacttcggaaggagggattctggtca
ttgaaaaggctacctaaagtgccagagcctccccgccctaaaggacactgggactatcta
tgtgaagagatgcagtggctctctgctgactttgctcaggagcgcagatggaaacgaggt
gtggcccggaaggtggtacgtatggtgatccggcaccatgaagaacagcgacaaaaggag
gagcgagctcggagagaggaacaggtcaagctgcgccgaattgcttctaccatggccaag
gatgttaggcagttctggagcaatgtggagaaggtggtacagttcaaacaacagtctcgg
cttgaagaaaaacgtaagaaagccttggatctgcacctggacttcattgtagggcaaact
gagaagtactcagaccttctgtctcagagccttaaccagccactatcctccagcaaagct
ggctcctccccttgccttggttcttcctcagcagcatccagtcctccacccccggtttct
cgactggatgatgaagatggggactttcaaccccaagaggaagaagaagaggatgatgag
gagaccattgaggttgaagaacagcaggaaggcaatgatgcagagacccagaggcgtgag
attgaacttcttcgacatgagggagaactgccactggaagagctgctccgttccctccct
cctcagctattgggtgggccttttagcccctctcaaacaccttctcatgacagtgatacc
caagatgggcctgaagaaaatattgaagaggagccatctcaggatttagaggtacaccct
cctccttccgctgtcacacagtgtaacaaaaagcgttggcgtccagatgaagatgatgaa
gagtttactgctaatgaagatgaagcagaggatgaagaagacactatagcagctgaagag
cagctggaaggggaggtggaccatgccatggaactgagcgagttggctcgagaaggtgag
ctttctatggaggagctcctgcagcaatatgcaggagcctatgcctgtgatgcctctgct
ccaggctcaggggatagtgaagacgaagatgaggttgaagccaatagctctgatggtgaa
ctagaggaaacagttgaagaggcagctcaagaagatagcagtcagtcggattctgctgag
gagtgtagtgaggatgaggaagatgaacattcagaggaagaaatgagtgagagttcacag
tcagaagaatctgagtctgatgagtcagaggatgctcagtcacagagccaagcagatgaa
gaaaaagaagatgagggagatgatgctgatgatgatgacgatgatgatgattttggagta
gagtacttgcttgcccgggatgatgaaaggagtgaggttgatgggggcagtggacctccc
acccccggtcctacgaccactctagggcccaagaaagaaattactgatattgctgcagca
gctgaaagtctccagcccaagggttatactttggctactactcaggtgaagacacctatt
cctctactccttcggggccagctccgagagtaccaacatattggccttgactggctggtc
actatgtatgagaagaagcttaatggcattcttgcagatgagatgggactaggaaagaca
atccagaccatctccttgcttgctcacttggcctgtgagaaaggtaactggggtccccat
ttaatcattgttccgaccagcgtgatgttgaactgggagatggaattgaaacgttggtgc
ccgagttttaaaatcctcacttactatggagctcagaaagagaggaagctcaagcggcag
ggctggaccaagcccaatgctttccatgtgtgtatcacatcttacaagctggtactgcaa
gatcaccaggcttttcgtcgcaagaactggcgctatctcattctggatgaggctcagaac
atcaagaatttcaagtcccaacgatggcagtcactgctcaactttaacagccagaggcgc
ctgctcctgacaggaactcccttgcagaatagcctcatggagctgtggtccttgatgcat
tttttgatgccacatgtcttccagtctcaccgagaattcaaggagtggttctctaaccct
ctaactggcatgattgaaggaagccaagaatataatgaaggtctagtcaaacgcctccac
aaggttctgcgaccttttttgctgcgccgagttaaggtggatgttgagaagcagatgccc
aaaaagtatgagcatgttatccggtgccgactttccaagcggcagcgctgtctctatgat
gacttcatggcacagactacaactaaggagacactagctacaggccattttatgagtgtc
atcaacattttgatgcagttgcggaaagtctgcaatcatccaaatctatttgaccctcga
cctgttacctccccgttcatcaccccaggcatctgctttagcaccgcctctctggtccta
agggccactgaaattcatcctctccagcgaattgacatgggtcggtttgatcttattggc
ctagagggccgagtctctcgatatgaggctgacacatttctgccccgccaccgtctttcc
cgccgcgtactgttagagatagcaactgctcctgatcctccacctcgtcccaagccagtc
aagatgaaggtcaacaggatgctgcagccagtgcccaagcaagaaggccgtacagtggtg
gtggtgaacagcccaagggctccccttggccctgtcccagtccgtccccctcctggccct
gaggtctcagtccagcccgctcttggtccagttcctccagtgttgccagcaccactcatg
gtgtcggcttcacctgccggaacaccagttgtacctgcatctcggccacctggacctgtt
ctcttgtctcccttgcagccaaatactggtcctctcccccaggtgttgccatcccccgtg
ggagtcatgagtgggacctcacggcctcccacaccaaccctgtctctgaagccagcccca
cctgccccagttcgactgagcccagctccacctccaggttcctccaacctcttgaagccc
ctcacagtgccaccaggctacactttatctcctgttgctgctaccaccacctcctccgcc
atagcaactgtcaccactacagcagtgccagccccgaattctacaccacagcgcctcatc
ttatctcctgaaatgcaggctcgtctgccttctggagaagtggtcagcattggacagttg
gcttccttggcacaacgtccagtgactagtgctgggggaagcaaacctctcaccttccaa
atccagggcaacaaactgactttgactggtgcccaggtgcgccagcttgctgtggggcag
ccccgcccgctgcaaaggaatgtggtgcacctggtgtcagcaggggggcagcaccacctc
atcagccagcctgcccatgtggccctcatccaggccgtggccccgacccctggccccacc
cctgtctctgtgctgccttcgacccccagcaccacccctgcccctactggcctcagcctt
ccgcttgctgctaaccaggtgccaccatccatggtgaacaatacaggcgtggtgaagatt
gtagtgagacaggctcctcgggatggattgactcctgttccaccattggcaccagcaccc
cggccttcaagttctgggcttccagctgtgttgacgtcacgccctacgttaacccctagc
cgtctatcctcacctactctgggtactactcgtacccccatacccacacccactctggtg
aggcccctcctcaagctggtccacagtccttcgcctgaagtcagtgcttcagcacccgga
gctgctcccatgaccatctcttcctctctgcacatgccatcctcactccctgggccaacc
tcttctccaatgacaattcacaattcctctcccctttctagtcctgtgtcctctacagtc
tcagtccctgtgtcatcttcacttcccatatctgttcctactgcacttcctgtcccaacc
tctgccccattacccatccccatcacagcccccttacctgtttcagacttgggtccagcc
ctgttgaccagtgtgaccccagcactcgctgttgtctcagcagcctctggaccacctttg
gcatcagctggggtttctccatcaatgtcagccttggctctaggtttggctactactcca
gccctgtccccacctcagacatctggtcactctctgttgttggctaccacctcttcacat
gttccaggattgaactcagctgtagccccagcatgctcacctgtcctggtgccagcttca
gctctgaccagtccttttccagtatcaccaagttcagctccagctcaggcttccattctg
gctgcagcaccttctacatctcaggctttagccacctctctggctcctatggcggcttca
cagacagcaatcctgggcccttctccaactcctcctctggctccgcttcctgttctggct
gcatcacagactccgcttccagctatgactccaccatcaatgtcaggaacccctttaccc
tcatcatcattggtatcagctccaacttctgtgttggctccctcatcaactcaaactctg
gtgtcaaccccagtttcatcacctctctcaagcctggcttctactcagacattgacccta
gccccaactttagcacccactcttggtggattgtctccgtctcagacacattctttggga
acagggagccctcaggggccctttccaattcagacattgtcattgactccagcatcatcc
ctggtaccaacatcagcccagacactatctttagcaccaggaggaccagtaggtccaact
caaacattgtctctggctccagtaccccctctggctccaagttctccagtgggctcagct
ccagctcacacactgactttggctccagcagcatcatctgcttcactcctggtcccaact
tcggtgcaaacacttaccttgagccctggtccagttcctgtgcccactctggatttatct
gccacccagactttagcactggccccagccttcacacaggctccaacttcccaggcgtct
tcccttgtttcggcatctggtgccgcttccttgcctgtcaccatggtaaaccggctacct
gttcccaaggatgagcctgagacactgactctgcgctctggtcctcccagccctcttccc
actgctacctcgttcagtgggccccggcctcgacgccagcccccaccaccacctcgttcc
cctttctatctggactctctggaagaaaagcggaagcagcagcgatctgagcgcctggaa
cggattttccaacttagtgaggctcatggggctctggcacccgtgtatgggactgaagtc
ctggatttctgtaccttgccccaacctgttgccagccccattggccctcgttctcctggc
cccagccaccccatcttttggacttacactgaggctgcccatcgggctgtactgtttccc
cagcagcgactagagcagctgtcagaaatcattgagaggttcatctttgtcatgcctcct
gtggaggcacctcccccttccctgcatgcctgccacccacctccttggctggcccctcat
caggcagccttccaggagcaattggcctgtgagctctggcctcgagcccgtcctttgcac
cgtattgtatgtaatatgcgaactcagttccctgacttgagactcatccagtatgattgt
ggaaagttgcagacattggctgtgctgttacggcagctcaaggcggagggccaccgggtg
ctcatttttacccaaatgacccgaatgctggatgtattagagcaatttctcacctaccat
ggccacctatatttgcgtctagatgggtctactagagtcgagcagagacaggccttgatg
gaacggttcaatgcggacaaacgcatattctgcttcatcctttcaactcgaagtgggggt
gtgggtgtgaacctgacaggagcagacactgttgttttttatgacagcgactggaatccc
accatggatgctcaggcccaggatcgctgtcaccgaattggtcaaactcgggatgtccac
atctataggcttatcagtgaacggacagtagaggagaacattctaaaaaaggcaaatcag
aagagaatgttgggagatatggccattgaaggaggcaacttcactacagcctattttaaa
cagcagaccatcagggaactgtttgatatgcctctggaggagccacctggctcatctgtg
tcttctgttcctgaagaagaagaggaggctgtggccagcaaacaaactcatattttggag
caggcattgtgtcgagcagaagatgaagaagatatccgtgcagccactcaggccaaagct
gaacaagtggctgagcttgcagaatttaatgagaatgatgggtttcctgctggtgaggga
gaggaggccagtcgacccgggcctggggctgaggatgaggagatgtccagggctgaacaa
gaaatcgctgcccttgtagaacagctgactcccattgagcgctatgccatgaagttccta
gaagcttcattggaggaagtaagccgagaggagctcaaacaggcagaagaacaagtggaa
gctgcccgaaaagacctggaccaagccaaggaggaggtgttccgactaccccacgaggaa
gaggaaggaacaggggctggggatgagatgtcttgtggaactagtggagtcagccaccgg
cgcagcaagaaaatcagggctcctgagaggctggggactcgtgtcagtgaacgtcttcgt
ggagctcggtcagaaactcaaggagcaaaccacactcctgtcacatcctcctccaatcat
acctgcaacaccttcgtgcctccccaatgcagccctgtgagagaaagaattcccaggcca
gtgcctagacctcgtcctcctgctgctccttctgctcctgctccttctcctgctccttct
cctcctccttctcctcctcctgctcctcctcctgctcctcctcctgctcctgctcctgct
cctgctcctctccctcctgctcctgctgcttctgttgcttctgctataacttctgcccta
gccacagctccaatacccatttcagccccaaatccagtaaccattcttcctgttcatatc
ttgcctactcccacacctctgcttcagcttcctccttgttcgtctcctgcttctacccct
ccttctgcctgtacccctttacccacttgtactcccttactagctcaaacctctgtatta
acctcttcttcaccaaccccacttgattcactttctgttcccatctctcctggagttacc
aacctccccttggactcaggggaagtacaagaattggcacctgtggagtctctagagctg
ccaggaatgaccagttctgaggcttccctggctagtcttgtgcctccaaaggatcttttg
ccagtggctgttgatatcctgcctgaatcagagaagactcttccttatattcctgtaccc
agttcaaccctggaagctgagagcatccccaatggtcagcagcaggaggtgccaggtcct
gtggaggggaccaataccacactgctacctggtagtgaggaattgaccatgagtctgaat
gagagcaatgggctggagctcccaccctcagcagcatctaatgagccacttcatgagcta
ttggagactcacaggaacttggaagaaacaagagaggttcagatcccagtttccaactca
gaaaagccacaagaacttgttagagctgaggttacagccccatcaacctcatcttcagcc
acctcctctcctgagggtcctttgcctgcccgccctccacggcgtcgaaccagtgctgat
gtagaaatcaggggtcaggggtctggccggacaggacagctcccaggtcccaaagtgctt
cgaaagctgccaggaaggctagtaactgtggtggaggaaaaagaacttgtaaagcgacgg
cgacatcgggcacctgccagcaccctagtacctggggtatctgaagttagtgccagtcca
agaagcccatcgatccacagtatgtcagggccagaatcctcacctcctagcagtgggccc
tgtgaagctgttcctacatcttcactgtctaccccaacccagcataccttcatagcttgt
catcacaatgaattggggatgactggtgggggaagcccagagaatggagaaggaacagag
cttgccatcactccacctgctgtgaaacgccggagggggaggcctcccaagaagaacaga
tctccagcagatgctgggagaggggtagatgaggtaccttcaaccatctctaaggggaaa
accaatggggttgacccagtccctggccctgaaacagtaactgttgcagaacctgacctc
aagccccagtttgttcctgggccccagcctcctggaccccagccagttcacagaccagaa
cccaccatcctatcgcctgtggagaaaagacggcgtgggcgtccccctaaagcaagggat
ttgcctattcctgggaccatatcctctccaggggatggcaatttagagagccggacacag
ccactccctttcccagcacccctgacaccactcctagcctgtcccactgctgtcaccaac
actgtcactactgtcaccatttcaacatccccaccgaaacggaagcggggccgacctccc
aagaatccgccatcaccaaggcccagccaacaccctgtcttggaccctgacagctcttct
gttcttgagagttgtggactgggagtgcagcgccaacccctgggccaggcagagagtgaa
ggcagttcctctgatgaggatggaagccgtcctctcacccgcctggcccgtcttcggctt
gaagctgaagggatgcggggacgaaagagtgaagggtccatggtgatggctgtaattcag
gatgacctggatttagcagatagtgggccaactgggttagaactgacaccacctgtggtc
tcattaactcccaaatttcgctcaacccgcctgcgtccagggtctctagtccccccacta
gaaactgagaaaatgcctcgaaaaaggtcaggggctccagttgggagtactgggatggca
aaacggggccgcttgcagcccccaagtcccctggggcctgagggttcagtagaggagtca
gaggcagaagcctcaggtgacgaggaggaaggagatggaaccccacgccgtcgaactggt
ccccgcaggctcgttgggaccaccaaccaaggggaccagcgtatcctgcgtagtagtgct
cctccccacctatctatccctactattagtcacagaggtcgaaaggccaagacgtga
DBGET
integrated database retrieval system