Mus pahari (shrew mouse): 110325945
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Entry
110325945 CDS
T05929
Symbol
Nalcn
Name
(RefSeq) sodium leak channel non-selective protein
KO
K21863
sodium leak channel non-selective protein
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mpah04040
]
110325945 (Nalcn)
Ion channels [BR:
mpah04040
]
Voltage-gated cation channels
Sodium leak channel, non-selective
110325945 (Nalcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
PsaF
DUF5914
FAM165
Motif
Other DBs
NCBI-GeneID:
110325945
NCBI-ProteinID:
XP_021059766
Ensembl:
MGP_PahariEiJ_G0030637
LinkDB
All DBs
Position
8:complement(110201120..110503517)
Genome browser
AA seq
1739 aa
AA seq
DB search
MLKRKQSSRVEAQPVTDFGPDESLSDNADILWINKPWVHSLLRICAIISVISVCMNTPMT
FEHYPPLQYVTFTLDTLLMFLYTAEMIAKMHIRGIVKGDSSYVKDRWCVFDGFMVFCLWV
SLVLQVFEIADIVDQMSPWGMLRIPRPLIMIRAFRIYFRFELPRTRITNILKRSGEQIWS
VSIFLLFFLLLYGILGVQMFGTFTYHCVVNDTKPGNVTWNSLAIPDTHCSPELEEGYQCP
PGFKCMDLEDLGLSRQELGYSGFNEIGTSIFTVYEASSQEGWVFLMYRAIDSFPRWRSYF
YFITLIFFLAWLVKNVFIAVIIETFAEIRVQFQQMWGTRSSTTSTATTQMFHEDAAGGWQ
LVAVDVNKPQGRAPACLQKMMRSSVFHMFILSMVTVDVIVAASNYYKGENFRRQYDEFYL
AEVAFTVLFDLEALLKIWCLGFTGYISSSLHKFELLLVIGTTLHVYPDLYHSQFTYFQVL
RVVRLIKISPALEDFVYKIFGPGKKLGSLVVFTASLLIVMSAISLQMFCFVEELDRFTTF
PRAFMSMFQILTQEGWVDVMDQTLNAVGHMWAPLVAIYFILYHLFATLILLSLFVAVILD
NLELDEDLKKLKQLKQSEANADTKEKLPLRLRIFEKFPNRPQMVKISKLPSDFTVPKIRE
SFMKQFIDRQQQDTCCLFRILPSTSSSSCDNPKKPAAEDNKYIDQKLRKSVFSIRARNLL
EKETAVTKILRACTRQRMLSGSFEGQPAKERSILSVQHHIRQERRSLRHGSNSQRISRGK
SLETLTQDHSNTVRYRNAQREDSEIKMIQEKKEQAEMKRKVQEEELRENHPYFDKPLFIV
GREHRFRNFCRVVVRARFNASKTDPVTGAVKNTKYHQLYDLLGLVTYLDWVMITVTICSC
ISMMFESPFRRVMHAPTLQIAEYVFVIFMSIELNLKIMADGLFFTPTAVIRDFGGVMDIF
IYLVSLIFLCWMPQNVPAESGAQLLMVLRCLRPLRIFKLVPQMRKVVRELFSGFKEIFLV
SILLLTLMLVFASFGVQLFAGKLAKCNDPNIIRREDCNGIFRINVSVSKNLNLKLRPGEK
KPGFWVPRVWANPRNFNFDNVGNAMLALFEVLSLKGWVEVRDVIIHRVGPIHGIYIHVFV
FLGCMIGLTLFVGVVIANFNENKGTALLTVDQRRWEDLKSRLKIAQPLHLPPRPDNDGFR
AKMYDITQHPFFKRTIALLVLAQSVLLSVKWDVEDPVTVPLATMSVVFTFIFVLEVTMKI
IAMSPAGFWQSRRNRYDLLVTSLGVVWVVLHFALLNAYTYMMGACVIVFRFFSICGKHVT
LKMLLLTVVVSMYKSFFIIVGMFLLLLCYAFAGVVLFGTVKYGENINRHANFSSAGKAIT
VLFRIVTGEDWNKIMHDCMVQPPFCTPDEFTYWATDCGNYAGALMYFCSFYVIIAYIMLN
LLVAIIVENFSLFYSTEEDQLLSYNDLRHFQIIWNMVDDKREGVIPTFRVKFLLRLLRGR
LEVDLDKDKLLFKHMCYEMERLHNGGDVTFHDVLSMLSYRSVDIRKSLQLEELLAREQLE
YTIEEEVAKQTIRMWLKKCLKRIRAKQQQSCSIIHSLRESQQQERSRLFLNPPSIETTQP
SEDTNANSQDHSMQPETSSQQQLLSPTLSDRGGSRQDAADTGKPQRKIGQWRLPSAPKPI
SHSVSSVNLRFGGRTTMKSVVCKMNPMPDTASCGSEVKKWWTRQLTVESDESGDDLLDI
NT seq
5220 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaaagaaagcagagttccagggtggaagcccagccagttactgactttggtcct
gatgaatctctatcagacaatgctgacatactctggattaataagccatgggttcactct
ctgctgcgcatttgtgccatcatcagcgtcatctcagtgtgcatgaacacacctatgacc
ttcgagcactatcctcctcttcagtatgtgaccttcaccttggacactttattgatgttc
ctctataccgcagagatgatagcaaagatgcacatacggggaattgtcaagggtgatagc
tcctatgtgaaggatcgctggtgtgtttttgatggattcatggtcttttgcctttgggta
tctcttgtgttacaggtgtttgaaatagctgacatagttgatcagatgtcaccttggggc
atgctgcggatcccacggccactcattatgatccgggctttcaggatttatttccgattt
gaactgccaaggacaagaattacaaacattttaaagcggtcaggagaacaaatatggagt
gtttcaattttcctccttttcttccttcttctgtatggaattttaggagttcaaatgttt
ggaacatttacctaccactgtgtagtcaatgacacaaagccaggaaatgtaacctggaat
agcttagctattccagatacgcactgctccccagagctagaagaaggctatcagtgccct
ccaggatttaaatgcatggacctggaagacctgggacttagcaggcaagagctgggctac
agtggctttaatgagataggcacgagtatattcacagtctatgaggcttcatctcaggaa
ggctgggtattcctcatgtacagagcaatcgacagtttcccccgctggcgctcctacttc
tacttcatcacactgattttcttccttgcttggcttgtcaagaatgtgtttattgctgtc
atcattgagacatttgcagaaatcagagtacagtttcaacaaatgtggggaactcggagc
agcacaacttctaccgccaccacacagatgttccatgaagatgccgctggtggttggcag
ctggtagctgtggatgtcaacaagccccagggacgtgccccagcctgcctacagaaaatg
atgcggtcatcggttttccacatgtttatcctgagcatggtgactgtggatgtaatagtt
gctgccagcaattactacaagggagagaacttcagaaggcagtatgatgaattctacctt
gcagaggtggcttttacagtacttttcgacctggaagcacttctgaagatatggtgcttg
gggtttactggctacatcagctcatctctccacaagtttgaactactgcttgttattggg
acgactctgcatgtgtacccagatctttatcattctcagtttacatacttccaggttctg
cgggtagtccggcttattaagatttccccagcattggaagactttgtgtacaagatattt
ggtcctgggaaaaaacttggaagcttggtggtgttcactgccagcctcctgatagttatg
tcagccatcagtttacagatgttctgcttcgtcgaagaactggacagattcaccacgttt
ccaagggcatttatgtctatgttccagatcctcacccaggaaggatgggtggatgtgatg
gatcagactctgaatgctgtggggcatatgtgggcaccactggttgccatctatttcatc
ctctatcatctctttgcaactctgatcctcctgagtttgtttgttgctgttattttggac
aacttagaacttgatgaagatctaaagaagctcaaacaattaaagcaaagtgaagcgaac
gcggacaccaaagaaaaactccctttgcgcttgagaatcttcgaaaagttcccaaacaga
ccgcaaatggtgaaaatctcaaaacttccttcagattttacagttcctaagatcagggaa
agcttcatgaagcagttcattgaccgccagcaacaggacacctgctgtctcttcagaatc
ctcccttctacctcttcctcatcatgtgacaaccccaagaagcccgccgctgaagacaac
aaatacattgatcaaaaactccgcaagtctgttttcagcataagggcaaggaacctactg
gaaaaggagaccgcagtcacaaaaatcttaagagcttgcactcgacagcgcatgctgagc
ggatcattcgaggggcagccagcaaaggagaggtcgatcctcagcgtgcagcatcacatc
cgccaggagcgcaggtcactaagacatggatccaacagccagaggatcagcaggggcaaa
tcgcttgaaactttaactcaagaccattcaaatacagtgcgctacagaaacgcacaaaga
gaagacagcgagataaagatgattcaggagaagaaagaacaagccgagatgaaaaggaag
gtgcaagaagaggagctgcgagagaaccacccatactttgacaagcctctcttcatcgtg
gggcgggagcacaggttcagaaacttctgccgcgtggtggttcgagcacgcttcaatgca
tccaaaacagaccctgtcacaggagctgtgaaaaatacaaagtaccaccaactttatgat
ttgctgggacttgtcacctacctggactgggtcatgatcactgtaaccatctgctcttgc
atttctatgatgttcgaatcccccttccggagagtcatgcatgcacccactttacagatc
gcagaatatgtatttgtgatattcatgagcattgagcttaatctgaagattatggcagat
ggcttgtttttcactccaactgctgtcatcagggactttggtggcgtcatggacatattt
atctatcttgtgagtttgatatttctttgttggatgcctcaaaatgtgcctgctgagtca
ggagcccagctactgatggttcttcggtgcctaagacctcttcggatattcaaactcgtg
ccccaaatgaggaaagtggttcgagaacttttcagtggtttcaaggaaatatttttggtc
tccattctgttgttgacgttaatgcttgtttttgcaagctttggggttcagctctttgct
ggaaagttagccaagtgcaatgaccccaacattatcagaagggaagactgtaatggcatc
ttcagaattaatgtaagtgtgtccaagaacttaaatttaaaactaagacctggagagaaa
aaacctggattttgggtgccccgtgtttgggcaaatcctcggaactttaactttgacaat
gtgggaaatgccatgctggcattatttgaagttctgtccttgaaaggctgggtagaagtg
agggatgtcattattcatcgtgtggggccgatccatggaatctatattcatgttttcgta
ttcctgggttgcatgattggactgacgctttttgtcggtgtagttattgctaacttcaat
gaaaacaaggggacagccctgctgacggtagatcagagaagatgggaagatctcaagagc
agattgaagatcgcacagcctcttcatctcccacctcgaccggataatgatggttttaga
gctaaaatgtatgacataacccagcatccattttttaagaggacaattgcattgctggtt
ctggcccagtctgtgttgctatctgtcaagtgggatgttgaggatcctgtgacagttcct
ttggcaacaatgtcggttgtcttcaccttcatttttgtcttagaggttacaatgaaaatc
atagcaatgtcaccagctgggttctggcaaagcagaagaaaccgatatgatctcttggtg
acatctcttggtgttgtgtgggtggtgcttcactttgctctgctgaatgcatacacctac
atgatgggagcctgtgtgattgtctttagatttttctccatctgtggaaagcatgtgaca
ttaaagatgctccttctgactgtggttgtcagcatgtacaagagcttctttatcatcgta
ggaatgtttctcttgctgctgtgctatgcctttgctggagttgttctgtttggtaccgta
aagtatggagagaacattaacaggcatgccaatttttcttcagctggcaaagccattact
gtattgtttcgaattgtcacaggtgaagactggaacaagataatgcatgattgtatggtt
cagcctccattttgtactccagatgaatttacatactgggcaacagactgtggcaattat
gcaggggcacttatgtacttctgctccttctatgtcatcatcgcctacatcatgctgaat
ctgcttgtagccataattgtggagaatttctctttgttttattccactgaagaggaccag
cttttgagttacaatgatcttcgccattttcaaattatatggaacatggtagatgataaa
agagagggtgtgatccccactttccgagtgaagttcctgctacggctgctgcgtgggagg
ctggaagtggaccttgataaagacaagctcctgtttaagcatatgtgctatgagatggag
aggctgcacaacggtggtgatgtcaccttccatgatgtcttaagcatgctgtcctaccgc
tctgtagacatcagaaagagcctgcagctagaggagctgctggcaagggagcagctagag
tacaccatagaggaggaggtggctaagcagactattcgcatgtggctgaagaagtgcttg
aaacgcatccgggctaaacaacagcagtcatgcagcatcatccacagcctgagagagagc
cagcagcaagagcggagccggttattcctgaatcctcccagcattgagacgacccagcca
agtgaggacactaacgccaacagccaggaccacagtatgcaacctgagacaagcagtcag
cagcagctcttaagccctactctgtcagacagaggaggaagccgacaggatgcagcagat
actggaaaaccccaaaggaagattgggcaatggcgtctgccctcagcccccaaaccaata
agccattctgtgtcttcggttaacctacggtttggaggaaggaccacaatgaagtctgtg
gtctgcaagatgaaccccatgccagacacagcttcctgtggctctgaagttaaaaagtgg
tggaccagacagctgaccgtggagagcgatgagagtggagatgatctcttggatatctag
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integrated database retrieval system
