Mus pahari (shrew mouse): 110326229
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Entry
110326229 CDS
T05929
Symbol
Hdac2
Name
(RefSeq) histone deacetylase 2
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03082
ATP-dependent chromatin remodeling
mpah03083
Polycomb repressive complex
mpah04110
Cell cycle
mpah04213
Longevity regulating pathway - multiple species
mpah04330
Notch signaling pathway
mpah04350
TGF-beta signaling pathway
mpah04613
Neutrophil extracellular trap formation
mpah04919
Thyroid hormone signaling pathway
mpah05016
Huntington disease
mpah05031
Amphetamine addiction
mpah05034
Alcoholism
mpah05165
Human papillomavirus infection
mpah05169
Epstein-Barr virus infection
mpah05200
Pathways in cancer
mpah05202
Transcriptional misregulation in cancer
mpah05203
Viral carcinogenesis
mpah05206
MicroRNAs in cancer
mpah05220
Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110326229 (Hdac2)
03083 Polycomb repressive complex
110326229 (Hdac2)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110326229 (Hdac2)
04350 TGF-beta signaling pathway
110326229 (Hdac2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
110326229 (Hdac2)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
110326229 (Hdac2)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
110326229 (Hdac2)
09149 Aging
04213 Longevity regulating pathway - multiple species
110326229 (Hdac2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110326229 (Hdac2)
05202 Transcriptional misregulation in cancer
110326229 (Hdac2)
05206 MicroRNAs in cancer
110326229 (Hdac2)
05203 Viral carcinogenesis
110326229 (Hdac2)
09162 Cancer: specific types
05220 Chronic myeloid leukemia
110326229 (Hdac2)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
110326229 (Hdac2)
05165 Human papillomavirus infection
110326229 (Hdac2)
09164 Neurodegenerative disease
05016 Huntington disease
110326229 (Hdac2)
09165 Substance dependence
05031 Amphetamine addiction
110326229 (Hdac2)
05034 Alcoholism
110326229 (Hdac2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpah03036
]
110326229 (Hdac2)
Enzymes [BR:
mpah01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
110326229 (Hdac2)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
110326229 (Hdac2)
HDAC complexes
Sin3A-HDAC complex
110326229 (Hdac2)
BRAF-HDAC complex
110326229 (Hdac2)
REST complex
110326229 (Hdac2)
SHIP complex
110326229 (Hdac2)
MiDAC complex
110326229 (Hdac2)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
110326229 (Hdac2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
110326229 (Hdac2)
Chromatin remodeling factors
NuRD complex
110326229 (Hdac2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
110326229
NCBI-ProteinID:
XP_021060117
Ensembl:
MGP_PahariEiJ_G0030656
LinkDB
All DBs
Position
9:3381960..3407573
Genome browser
AA seq
488 aa
AA seq
DB search
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKTDVKEEDKSKDNSSEKTDTKGA
KSEQLSNP
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagtcaaggaggcggcaagaagaaagtgtgctactactatgatggtgatatt
ggaaattattattatggccagggtcatcccatgaagcctcataggatccggatgactcat
aacttgctgctaaattatggtttataccgaaaaatggaaatatataggcctcataaagcc
actgctgaagaaatgacaaaataccacagtgatgagtatatcaaatttctacgatcaata
agaccagataacatgtctgagtacagtaagcagatgcagagatttaacgttggagaagat
tgtccggtgtttgatggactctttgagttttgtcagctctccaccggtggttcagttgct
ggggctgtgaagttaaaccggcaacaaactgatatggctgtcaactgggctggaggattg
catcatgccaagaagtcagaagcatcagggttctgctatgttaatgatattgtgcttgcc
atcctcgagttactcaagtaccatcagagagtcttatatattgacatagacatccaccat
ggtgatggtgttgaggaagctttttatacaacagatcgtgtgatgaccgtctcattccat
aaatatggggaatactttcctggaacaggagacttgagggatattggtgctggaaaggga
aaatactatgctgtcaattttcctatgagagatggtatagatgatgaatcatatggacaa
atttttaagcctatcatctcaaaagtgatggagatgtaccagcctagcgctgtggtgcta
cagtgtggcgcagactcgctgtcgggggacaggcttggttgtttcaatctaactgtcaaa
ggtcatgctaaatgtgtagaagtagtgaaaacttttaacttgccattgctgatgctcggt
ggaggaggctacacaatccggaatgttgctcgatgttggacatatgagactgcagttgcc
cttgattgtgaaattcccaatgagttgccatataatgattactttgagtattttggacca
gacttcaaactgcatattagtccttcaaacatgacaaaccagaatactccagaatatatg
gaaaagataaaacagcgtttatttgaaaatctacgtatgttaccacatgcacctggtgtt
caaatgcaagctattccggaggatgctgttcatgaagacagtggagatgaggatggagaa
gacccggacaaaagaatttccattcgagcatcagacaaacggatagcttgcgatgaagag
ttttcagattctgaggatgaaggtgaaggaggtcgtaggaatgttgctgatcataagaag
ggagcaaagaaggctaggattgaagaagacaagaaggagacagaagacaagaagacagat
gttaaggaagaagacaaatccaaggacaatagtagtgagaaaacagacaccaaaggagct
aagtcagaacaactcagcaacccttga
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