Mus pahari (shrew mouse): 110326325
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Entry
110326325 CDS
T05929
Symbol
Ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mpah03009
]
110326325 (Ddx21)
03036 Chromosome and associated proteins [BR:
mpah03036
]
110326325 (Ddx21)
Enzymes [BR:
mpah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110326325 (Ddx21)
Ribosome biogenesis [BR:
mpah03009
]
Eukaryotic type
Pre-60S particles
Helicases
110326325 (Ddx21)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
110326325 (Ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
Cas3-like_C_2
AAA_30
Motif
Other DBs
NCBI-GeneID:
110326325
NCBI-ProteinID:
XP_021060324
Ensembl:
MGP_PahariEiJ_G0030804
LinkDB
All DBs
Position
9:complement(27982164..28002468)
Genome browser
AA seq
777 aa
AA seq
DB search
MPGKLRSASKAGSDGAEENMETQPKPSEKKTRKERTKSKTEEATEGMEEATSSKAKKTVK
KKEPSEDDVDPPKSKKAKKEEEEPQDDTASKSKTSKKKKEPLEKKAASKTKEIKTEEPSE
EEADIPKPKKMKKGKEANGDMGEKSPKLKNGLSQSEPQSNSSDAPGEESSSETEKEIPVE
QKEGAFSNFPISEETVKLLKARGVNFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAI
PLIEKLQGGLQERKRGRAPQVLVLAPTRELANQVSKDFSDITKKLSVACFYGGTPYGGQI
ERMRSGIDILVGTPGLNKENLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILCVAYK
KDSEDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKAAITVEHLAIKCHWTE
RAAVIGDVIRVYSGHQGRTIIFCETKKDAQELSQNTCIKQDAQSLHGDIPQKQREITLKG
FRNGSFGVLVATNVAARGLDIPEVDLVVQSCPPKDVESYIHRSGRTGRAGRTGVCICFYQ
NKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDSVPPTAISHFKQSAERLI
EEKGAVEALAAALAHISGATSVDQRSLINSQAGFVTMILRCSIEMPNISYAWKELKEQLG
ESVDAKVKGMVFLKGKLGVCFDVRTEAVTEIQEKWHDSRRWQLTVATEQPELEGPPEGYR
GGRGQRDGSRGAFRGQRGGSRNFRGQGHGGGNRNFRGQRPGGGNKGQKRSFSKAFGQ
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgccgggaaaactccgcagtgcgtccaaggcgggctcagacggggccgaggagaacatg
gagacgcagccgaagccgagcgagaagaaaactagaaaagagaggacaaaatcaaagaca
gaagaagcaacagaaggaatggaagaggccacttcctccaaagcaaagaaaacagttaaa
aagaaagagccttctgaagatgatgtagatccccctaaatccaagaaggccaagaaggag
gaggaggagcctcaagatgacactgcttctaaaagcaaaacctccaagaagaaaaaggag
ccccttgagaagaaagcagcctctaaaaccaaagagataaaaacagaggagccttccgaa
gaagaggcagacattcctaagcccaagaagatgaagaaagggaaggaagcaaacggagac
atgggggagaaaagccccaagctgaagaatggactctcccagtctgagccacagtccaac
tccagtgatgctcctggtgaagaaagtagtagtgagacagaaaaggaaatacccgtggag
cagaaagaaggagccttctctaattttcccatctctgaagagactgtcaagcttctcaaa
gctcgtggggtgaacttcctgtttcctatacaagccaagaccttccaccatgtgtacagt
gggaaagacttaattgcccaggcacgaacaggaactgggaagacattctcttttgctatc
cctttgattgagaaacttcaaggtgggctacaagagaggaagagaggccgagcccctcag
gtgctagtccttgcacccaccagagaattagcaaatcaagtgagcaaagacttcagcgac
atcaccaaaaagctgtctgtagcttgtttttatggtggaactccctacggtggtcagatt
gaacgaatgcggagtgggatcgatatcctggttgggaccccaggtcttaataaagaaaac
ttgcagaatggcaagctagatctcaccaaacttaaacatgttgtcctggatgaagtcgac
cagatgttggatatgggttttgctgatcaagtggaagaaattttatgtgtggcatacaag
aaagattctgaagacaacccccaaacattgcttttctctgcaacttgccctcattgggta
tttaatgttgctaagaaatacatgaaatctacatacgaacaggtggacctgattggtaaa
aagactcagaaagcagccataactgtggagcacctggccattaagtgtcactggacagaa
agggcagcggtgattggggatgtgatccgagtgtacagtggtcatcaagggcgcacaatc
atcttctgtgaaaccaagaaggatgctcaggagctgtctcagaacacgtgcataaagcag
gatgcccagtccttacatggcgacattccacagaagcaaagggaaatcaccctgaaaggt
ttccgaaatggaagttttggagttttggtggcaaccaatgttgctgcccgtggcttagac
atccctgaggttgacttggtggttcagagctgtccgccaaaggatgtggagtcttacatt
catcgttcagggcggacaggaagagctggaaggacgggggtttgcatctgcttttaccag
aacaaagaagagtaccagttagcacaagtggagcagaaagcgggaattaaatttaaacgg
ataggtgttccttctgcaacggaaataataaaagcctccagcaaagatgccatcaggctc
ttggattccgtgcctcccactgccattagccatttcaagcagtcagctgagaggctgatt
gaggagaagggagctgtggaggccctggcagctgcgctggcacacatctcaggggccaca
tcagtcgatcagcgctccctgatcaactcacaagcaggctttgtgaccatgatcctgcgg
tgctccattgagatgcccaacatcagttacgcttggaaagaacttaaggagcagctgggt
gagagcgtcgatgccaaagtgaaggggatggtcttcctcaaaggaaaactgggggtttgt
tttgatgtccgcactgaagcagtcacagaaatacaggagaagtggcatgattcaaggcgc
tggcagctcaccgtggccaccgagcagccagagctggaaggacctccagaaggatatcga
ggtggcaggggtcagcgtgatggcagccgtggtgctttcagaggacagcggggtggaagc
aggaacttccggggacagggacatggaggaggaaatagaaacttccgaggacagcgacca
ggaggtggcaacaaaggccagaagcggagttttagtaaagcgtttggtcagtga
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