Mus pahari (shrew mouse): 110326481
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Entry
110326481 CDS
T05929
Name
(RefSeq) E3 SUMO-protein ligase RanBP2
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03013
Nucleocytoplasmic transport
mpah03250
Viral life cycle - HIV-1
mpah05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110326481
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110326481
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110326481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110326481
03110 Chaperones and folding catalysts [BR:
mpah03110
]
110326481
04121 Ubiquitin system [BR:
mpah04121
]
110326481
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110326481
Chaperones and folding catalysts [BR:
mpah03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
110326481
Ubiquitin system [BR:
mpah04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
110326481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
IR1-M
zf-RanBP
Pro_isomerase
WH1
TPR_1
TPR_2
TPR_14
TPR_16
VID27_PH
TPR_8
TPR_11
Motif
Other DBs
NCBI-GeneID:
110326481
NCBI-ProteinID:
XP_021060621
Ensembl:
MGP_PahariEiJ_G0030751
LinkDB
All DBs
Position
9:23888799..23935805
Genome browser
AA seq
3057 aa
AA seq
DB search
MRRSKADVERYIASVQGSAPSPREKSMKGFYFAKLYYEAKEYDLAKKYISTYINVQERDP
KAHRFLGLLYEVEENTDKAVECYKRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVER
AAKLFPGSPAIYKLKEQLLDCKGEDGWNKLFDLIQSELYARPDDVHVNIRLVELYRSNKR
LKDAVAHCHEADRNTALRSSLEWNSCVVQTLKEYLESLQCLDPDKSTWRATNKDLLLAYA
NLMLLTLSTRDVQESRELLESFDSALQSVKSSVGGNDELSATFLETKGHFYMHVGSLLLK
MGQQSDIQWRALSELAALCYLVAFQVPRPKVKLIKGEAGQNLLETMAHDRLSQSGHMLLN
LSRGKQDFLKEVVESFANKSGQSALCDALCSSQSSKERSFLGNDDIGNLDGQVPDPDDLA
RYDTGAVRAHNGSLQHLTWLGLQWKSLSTLPAIRKWLKQLFHHLPQETSRLETNAPESIC
ILDLEVFLLGVIYTSHLQLKEKCNSHHTSYQPLCLPLPVCRQLCTERQKTWWDAVCTLIH
RKALPGTSAKLRLLVQREINSLRGQEKHGLHPALLVHWAQSLQKTGSSLNSFYDQREYIG
RSVHYWRKVLPLLKMIRKKNNIPEPIDPLFKHFHSVDIQASEIGEYEEDAHITFAILDAV
NGNIEDAMTAFESIKNVVSYWNLALIFHRKAEDIENDALSPEEQEECKNYLRKTRDYLIK
ILDDSDSNTSVVQKLPVPLESVKEMLNSVMQELEDYSEGGTLYKNGCWRNADSELKHSTP
SPTKYSLSPSKSYKYSPKTPPRWAEDQNSLLKMICQQVEAIKKEMQELKLNSNNSASPHR
WPAEHYGQDPAPDGYQGSQTFHGAPLTVATTGPSAYYSQSPAYNSQYLLRPAANVTPTKG
PVYGMNRLPPQQHIYAYSQQMHTPPVQNSSACMFSQEMYGPPLRFESPATGILSPRGDDY
FNYNVQQTSTNPPLPEPGYFTKPPLVAHASRSAESKVIEFGKSNFVQPMQGEVIRPPLTT
PAHTAQPTPFKFNSNFKSNDGDFTFSSPQVVTQPSSTAYSNSESLLGLLTSDKPLQGDGY
SGLKPISGQASGSRNTFSFGSKNTLTENMGPNQQKNFGFRRSDDMFTFHGPGKSIFTTPA
SDLANKSHETDGGSAHGDEEDDGPHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDG
ESKEWKERGIGNVKILRHKTSGKIRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVW
HALDYADELPKPEQLAIRFKTPEEAALFKCKFEEAQNILKALGTNASTAPNHTLRIVKES
ATQDNKDICKSDGGNLNFEFQIVKKEGPCWNCNSCSFKNAATAKKCVSCQNTNPTSNKEL
LGPPLVENGFAPKTGPESAQDRFAIMPPNKEGHWDCSVCLVRNEPTVSRCIACQNTKSAN
KNGSSFVQTSFKFGQGALPKSVDSDFRSVFSKKESQWECSVCLVTNERSVTKCVACENPG
KQVKEWNCSLCSVRNEAHAIRCVACDNPVSPSLSIAPPSFKFGTSETSKPFRIGFEGMFA
KKEGQWDCSLCFVRNEASVTHCIACQNPNKQNQPTSCVSAPASSETSRSPKSGFEGLLTK
KEGEWECAVCSVQNESSSLKCVACEASKPTHKPHEAPSAFTVGSKSQSNESSGSQVGTEF
KSNFPEKNFKVGISEQKFKFGHVDQEKTPSFAFQGGSNIEFKSIKDGFSFCIPVSADGFK
FGIQEKGNQEKKNEKHLENDPSFQAHDTSGQKNGSGVVFGQTSSTFTFADLAESTSKEGF
QFGKKDPNFKGFSGAGEKLFSSQSGKVTEKANTSSDLEKDDDAYKTEDSDDIHFEPVVQM
PEKVELVTGEEDEKVLYSQRVKLFRFDAEISQWKERGLGNLKILKNEVNGKLRMLMRREQ
VLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFKQKF
EECQRLLLDIPLQTPHKLVDTGRAAKLIQRAEEMKSGLKDFKTFLTNDQAKVTDEENTSS
GADASSAPDTTVKPNPANTGPALEWDNYDLREDALDDSVSSSSVHASPLASSPVRKNLFR
FGESTTGFNFSFKSALSPSKSPAKLNQSGTSVGTDEESDVTQEEERDGQYFEPVVPLPDL
VEVSSGEENEQVVFSHRAKLYRYDKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLK
LCANHRITPDMTLQTMKGTERVWVWTACDFADGERKIEHLAVRFKLQDVADSFKKIFDEA
KTAQEKDSLITPHVSHLSTPRESPCGKTAIAVLEETTRERTDLTQGDEVIDTTSEAGETS
STSETTLKAVVSPPKFVFGSESVKSIFSSEKSKPFAFGNSSATGSLFGFSFNAPLKNSNS
EMTSRVQSGSEGKVKPDKCELPQNSDIKQSSDGKVKNLSAFSKENSSTSYTFKTPEEARE
KSKPEDLPSDNDILIVYELTPTPEQKALAEKLLLPSTFFCYKNRPGYVSEEEEDDEDYEM
AVKKLNGKLYLDDSEKPLEENLADNDKECVIVWEKKPTVEERAKADTLKLPPTFFCGVCS
DTDEDNGNGEDFQSELRKVCEAQKSQNEKVTDTVGIEHIGETEVTNPVGCKSEEPDSDTK
HSISSPVSGTMDKPVDLSTRKETDMEFPSKGESKTVLFGFGSGTGLSFADLASSNSGDFA
FGSKDKNFQWANTGAAVFGTQSTNKGGEDEDGSDEDVVHNEDIHFEPIVSLPEVEVKSGE
EDEEVLFKERAKLYRWDRDVSQWKERGIGDIKILWHTIKNYYRILMRRDQVFKVCANHVI
TKAMELKPLNVSNNALVWTASDYADGEAKVEQLAVRFKTKEMTESFKKKFEECQQNIMKL
QNGQTSLAAELSKETNPVVFFDVCADGEPLGRIIMELFSNIVPQTAENFRALCTGEKGFG
FKNSIFHRVVPDFICQGGDITKYNGTGGQSIYGVKFDDENFDLKHTGPGLLSMANCGQNT
NSSQFFITLKKAEHLDFKHVVFGFVKDGMDTVRKIESFGSPKGSVSRRICITECGQL
NT seq
9174 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcagcaaggccgacgtggagcgctacatcgcctcggtgcagggctccgccccg
tcgccccgagagaagtcaatgaaaggattctattttgcaaagctgtactatgaagctaaa
gaatatgatcttgctaaaaaatacatttctacgtatattaatgtgcaagagagagaccct
aaagcccacagatttttgggtcttctttatgaagttgaagaaaatacagacaaagctgta
gaatgttataagcgttcagtggaattaaacccaacacaaaaagatcttgtgttgaagatt
gcagaattgctttgtaaaaatgatgtgaccgatggaagagcaaaatactgggttgaaaga
gcagccaaacttttcccaggaagtcctgccatttataagttaaaggaacaacttttagat
tgtaaaggtgaagatggatggaataaactttttgacttgattcaatcagaactttatgca
agacctgatgatgttcatgtaaatatccgactagtagagctttatcgttcaaataaaaga
ttgaaggatgctgtggcccactgccatgaggcagacaggaacacagctttacgttcaagt
ttagaatggaattcatgtgttgtacagactcttaaggaatatctggagtctctgcagtgc
ttggatcctgataaaagtacttggagagcaaccaataaagacttgcttctagcgtatgct
aaccttatgctactgacactttccaccagagatgtgcaggaaagtagagaactattggaa
agttttgatagtgctcttcagtctgtgaaatcttctgtgggtggaaatgatgagctatca
gctactttcctagaaacgaaaggacatttctacatgcatgttggctctctgcttttgaaa
atgggtcagcagagtgacatccagtggcgagctctttctgagctggctgcattgtgttat
cttgtagcatttcaggttccaagaccaaaggttaaattaataaaaggagaagctggacaa
aatctactggaaacgatggcccatgatcgccttagccagtcagggcacatgttgttaaac
ttaagtcgtggcaagcaagactttctaaaggaagttgtggaatcttttgctaacaaaagt
ggccagtctgctctctgtgatgctctgtgttccagtcagtcatccaaggagagatccttt
cttggtaatgatgatattggaaaccttgatggacaagtgccagaccctgatgacttggct
agatatgatactggtgccgttcgagcacataatggtagtcttcagcaccttacctggctt
ggcttacaatggaaatcactgtctactttaccagcaattcgaaaatggttaaaacagctc
ttccaccatttgcctcaggagacgtcaaggcttgaaacaaatgcacctgaatcaatatgt
attttagatcttgaagtattcttacttggagttatatataccagtcacttacaattaaag
gagaagtgtaattctcaccatacttcctatcagccattatgtttgccacttcctgtgtgc
agacagctttgtacagaaagacagaagacatggtgggatgcagtttgtactctgattcac
agaaaggcgttacctggaacctcagcaaaattgcgacttctagttcaacgtgagataaac
agtctgagaggccaggaaaagcacggccttcaccctgctctgcttgtgcattgggcccag
agtcttcaaaaaacaggcagcagtcttaattctttttatgatcaacgggaatacataggc
agaagtgttcattattggaggaaagttttaccattgttgaagatgatcagaaagaagaat
aatattcctgaacctattgatcctctgtttaaacatttccatagtgtggatattcaggca
tctgaaattggtgaatatgaagaagatgcacacataacttttgctatattggatgctgtt
aatggaaatatagaagatgccatgactgcttttgaatcgattaaaaatgtagtttcttac
tggaatcttgcactgatttttcacaggaaagcagaagacattgaaaatgatgccttgtct
cctgaagaacaagaagaatgcaaaaattatctgagaaagactagggactacctgataaag
attttagatgatagtgattcaaatacttctgtggttcagaaattgcctgttccccttgag
tctgtaaaagagatgctgaactcagttatgcaggaacttgaagactacagtgaaggaggt
actctttataaaaacggttgctggcgaaatgctgattcagagttaaagcattcaacacca
tctcctaccaaatattctctatcaccaagtaaaagttacaagtactctccaaaaacacca
cctcgatgggcagaagatcaaaattctttactgaaaatgatctgccagcaagtagaggcc
attaagaaagaaatgcaggaattgaagctaaatagcaataactctgcatcccctcatcgc
tggccggcagaacattatggacaagacccagctcctgatgggtatcaggggtcacaaact
tttcacggggctccactaacagttgcaactactggcccatcagcatattatagtcagtca
cctgcatataattcccagtatcttctcagaccagctgctaatgtaactcccacaaagggt
ccagtttatggcatgaataggcttccaccccaacaacatatttatgcatattcacaacag
atgcacacaccgccagtacaaaattcatctgcttgtatgttctctcaggaaatgtatggt
cctcccttgcgttttgagtctcctgcaacaggaattctatcacccaggggtgatgattat
tttaattacaatgttcaacagacaagcacaaatccacctttgccagaaccagggtatttc
acaaagccaccacttgtagctcatgcttcaaggtcagcagaatcaaaggttatagaattt
ggaaaatctaatttcgttcagcccatgcagggtgaagtaataaggccacctttgacaaca
ccagcacatacagcacagccaactccctttaaatttaactcaaatttcaaatcaaatgat
ggtgacttcacattttcatcaccacaggtagtgacacagccttcttcaacagcttatagt
aatagtgaaagtcttttaggtctcctgacttcagataagcctttacaaggagatggctat
agtggactaaagccaatatctggtcaagctagtgggtctcggaatacattcagttttgga
agcaaaaatacacttacagaaaacatgggcccaaatcagcagaagaattttggttttcgt
cgaagtgatgacatgtttacttttcacggtccagggaagtccatatttacaacacctgct
tcagacctggcaaataaaagtcatgaaacagatggaggaagtgctcatggggatgaggaa
gatgatggccctcactttgagcctgtggtacctcttcctgacaagatagaagtaaaaact
ggtgaggaagacgaagaagaattcttttgcaatcgtgcaaagttgttccgttttgatggt
gaatccaaagaatggaaggaacgtggaataggcaatgtaaaaatactaaggcataaaaca
tctggtaaaattcgccttttgatgagacgagagcaagtattaaagatctgtgcaaatcat
tacataagcccagatatgaaactgacaccaaatgctggctcagatagatcttttgtatgg
cacgcccttgattatgcagatgaattgccaaaaccagaacaacttgcaattagattcaaa
actcctgaggaagcagcactatttaagtgtaaatttgaagaggcccagaacattttaaaa
gccttaggaacaaatgcatctacagcaccaaatcatactcttagaattgtcaaagaatct
gcaactcaggataacaaggacatttgcaaatctgacggtggaaacttgaattttgaattc
cagattgtaaagaaggaagggccttgctggaattgtaacagctgctcctttaagaatgct
gcaactgctaagaaatgtgtatcatgccagaatacaaacccaaccagtaacaaagagctc
ctaggtcctccgttagttgaaaatggctttgctcctaaaactggcccagaaagtgctcaa
gatcgatttgcaataatgcctccaaataaagaaggccattgggattgcagtgtttgttta
gtaagaaatgaacccactgtttctaggtgcattgcatgtcagaacacaaagtctgctaac
aaaaatgggtcttcttttgttcaaacttctttcaaatttggtcagggagctcttcctaag
tctgttgacagtgatttcagatctgttttttctaaaaaagaaagtcagtgggaatgcagt
gtatgcctagtaacaaatgaaagaagcgttacaaaatgtgttgcttgtgagaacccagga
aaacaggtgaaagaatggaattgtagtttgtgctcagtgagaaatgaagcgcatgctata
agatgtgttgcttgtgataatcctgtttcaccaagtttatctattgcacctccgtctttc
aagtttggtacctcagagacgagtaagcctttcaggattggatttgagggtatgttcgcc
aagaaggaaggacagtgggactgtagcttgtgttttgtccgaaatgaagccagtgttact
cattgtattgcttgtcagaatccaaataagcagaatcagcctacatcttgtgtatcagct
cctgcctcttcagagacaagcaggtctccaaagagtggctttgaaggcttactcaccaaa
aaggaaggggagtgggagtgtgctgtttgttctgtacaaaacgagagctcttccctaaaa
tgtgtggcttgtgaagcctctaaaccaactcataagcctcatgaagctccttcagctttc
acagtgggctcaaagtcacagtcaaatgaatcttcaggaagtcaagtgggaactgaattc
aaaagtaactttccagaaaagaattttaaagttggcatttcagagcagaaatttaaattt
gggcatgtggatcaagaaaaaacaccttcctttgcttttcagggtggctctaatatagaa
tttaagtcaatcaaggatggatttagtttttgcattcctgtatctgctgatgggtttaaa
tttggcattcaggaaaagggaaatcaagagaagaagaatgaaaaacatcttgaaaatgat
cccagttttcaagctcatgatactagtggccagaagaatggtagtggtgtggtctttggt
cagacaagcagcaccttcacctttgcagaccttgcagagtcaacatcaaaggaaggattt
caatttggcaagaaagaccctaatttcaagggattttcaggtgcaggagaaaaattattc
tcatcacaaagtggcaaagtgactgagaaagcaaatacgtcttcagatcttgagaaagat
gatgatgcctataagactgaggacagtgatgacatccattttgaaccagtagtgcagatg
ccagaaaaggtagaactagtaacaggagaagaagatgaaaaagttttgtattcacaaagg
gtgaaattatttagatttgatgctgagataagtcagtggaaagaaaggggtttggggaat
ttaaaaattctcaaaaatgaagtcaatggtaaactgagaatgctgatgcgaagagaacaa
gtgctaaaagtttgtgccaatcattggataaccactacaatgaacctgaagcctctctca
gggtcagatagagcatggatgtggctagctagtgatttttccgatggtgacgcaaaacta
gaacaactggctgcaaagtttaaaacgccagagctagctgaagaattcaagcagaaattt
gaggaatgtcaacgtcttctcttagacattccacttcagacaccccataaacttgtagat
actggcagggctgctaaattaatacagagagctgaggaaatgaagagcggactgaaagat
ttcaaaacatttttgactaatgatcaagcaaaggtcactgatgaagagaacacaagttca
ggtgcagatgcttccagtgctccagacactacagtcaagccaaaccctgctaacactggg
cccgccttagaatgggacaactatgacttacgggaagacgccttggatgacagtgtcagc
agcagctcagttcatgcttctccattggcaagcagccctgtgcggaaaaacctcttccgc
tttggtgagtcaactacaggatttaacttcagttttaaatctgctctgagtccatctaag
tctccagccaaattgaaccagagtggaacttcagttggcacggatgaggaatctgatgtt
actcaagaagaagagagagatggacagtactttgaacctgttgttcctttacctgatcta
gttgaagtatccagtggtgaggagaatgaacaagttgtttttagtcacagagcaaaactt
tacagatatgataaagatgttggccagtggaaagaaagaggcattggagatataaagatc
ttacagaattacgataataaacaagttcgcatcgtgatgagaagggaccaggtattaaaa
ctttgtgctaatcatagaataactccagatatgactttgcaaactatgaaagggactgaa
agagtgtgggtgtggactgcatgtgattttgcagatggagaaagaaaaattgaacatttg
gctgttcgttttaaactacaggatgttgcagactcatttaagaaaatttttgatgaagca
aaaacagctcaagaaaaagattcattgataacacctcatgtttctcatctgagcacccct
agagagtcaccatgtggcaaaactgctattgctgttttagaagaaaccacaagagaaagg
acagatttaactcagggagatgaagtaatagatacaacttcagaagctggagaaacatct
agcacttctgaaacaacactgaaagcagtggtttctcctcctaagtttgtatttggctca
gaatctgttaaaagcatttttagtagtgaaaaatccaagccatttgcatttggcaacagt
tcagctactggttctttgtttggatttagttttaatgcacctttgaaaaatagcaatagt
gaaatgacttccagagtccagagtggatctgaaggaaaagtaaaacctgacaaatgtgag
ctgccccagaactctgacatcaagcaatcttctgatggcaaagtcaaaaatctcagtgcc
ttttcaaaagagaactcttcaactagttatacatttaaaacaccagaagaggcacgagag
aagagtaaacctgaagatctcccctcagataatgatattctcattgtgtatgaactcact
cccacccctgagcagaaagcccttgcagagaaacttctgcttccttcaactttcttttgt
tataagaataggcctggttatgttagtgaagaagaggaggatgatgaagattatgaaatg
gctgtcaagaagcttaatggaaaactctatctggatgattcagaaaaaccattggaagaa
aatctagcagataatgacaaggaatgtgtcattgtttgggaaaagaagccgacagttgaa
gagagagcaaaagcagacactttaaagctcccacctacgtttttctgcggagtctgcagt
gatactgatgaggacaatggaaatggggaggactttcagtcggagcttcggaaagtctgt
gaagctcagaaatcccagaatgagaaagtgactgatacagttggtattgagcatataggt
gagactgaagtaacaaaccctgttggctgtaagtctgaagaacctgattctgatactaaa
catagtatctcatcccctgtttctgggactatggacaaacccgtagatttgtccactaga
aaagaaactgacatggaattcccaagcaaaggggaaagcaagactgttttgtttggattt
ggaagtggcacaggcctgtcatttgcagacttggcttcaagtaattctggagattttgct
tttggttctaaagataaaaatttccagtgggcaaatactggagcagctgtgtttggaaca
cagtcaacaaataaaggtggtgaggatgaagacggcagtgatgaagatgtagttcataat
gaggacatccactttgaaccgatagtctccttaccagaggtagaagtgaaatctggagag
gaagatgaagaagttttgttcaaagagagagccaaactttatagatgggatagagatgtc
agtcagtggaaggagagaggtattggagatataaagattctctggcatacaataaagaat
tattatcggatcctaatgagaagagaccaggtttttaaagtgtgtgccaaccatgttatt
accaaagccatggaattaaaaccgttaaatgtttctaacaatgccttagtgtggactgcc
tcagattatgcagatggagaagcaaaagtagaacagcttgcagtgagatttaagacaaag
gaaatgactgagagttttaagaagaaatttgaagaatgtcaacaaaatataatgaaactc
cagaatggacaaacatcccttgcagcagaattatcaaaggaaaccaatcctgtggtgttc
ttcgatgtttgtgcggatggtgaacctctaggacggataatcatggaattattttcaaat
atcgttcctcaaactgctgagaacttcagagcattatgcactggagagaagggctttggt
tttaagaactccatttttcaccgagtagttccagattttatttgccaagggggagatatt
accaaatacaatggaacaggcggtcagtccatttatggagttaaatttgatgatgaaaac
tttgatttgaaacacactggtcctggcttactatccatggccaattgcggccagaatacc
aacagctctcaattttttataacactgaagaaagcagaacatttggactttaagcatgta
gtctttgggtttgttaaggatggcatggatactgtgagaaagattgaatcatttggttct
cctaaagggtctgttagtagaagaatttgtatcacagaatgtggacagctataa
DBGET
integrated database retrieval system