Mus pahari (shrew mouse): 110326711
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Entry
110326711 CDS
T05929
Symbol
Sim1
Name
(RefSeq) single-minded homolog 1
KO
K09100
single-minded
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110326711 (Sim1)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
110326711 (Sim1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIM_C
PAS_3
PAS_11
PAS
HLH
PAS_9
PAS_4
Per3-like_PAS-A
Motif
Other DBs
NCBI-GeneID:
110326711
NCBI-ProteinID:
XP_021060949
Ensembl:
MGP_PahariEiJ_G0030720
LinkDB
All DBs
Position
9:16790576..16917124
Genome browser
AA seq
765 aa
AA seq
DB search
MKEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRVVFPEGL
GEAWGHTSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELT
GNSIYEYIHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAKRNAGLTCGGY
KVIHCSGYLKIRQYSLDMSPFDGCYQNVGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDM
KLIFLDSRVAELTGYEPQDLIEKTLYHHVHGCDTFHLRCAHHLLLVKGQVTTKYYRFLAK
HGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTDTEYKGLQLSLDQISASKPTFSYTSSS
TPTITDNRKGAKSRLSSSKSKPRASPYPQYSGFHTERSESDHDSQWGGSPLTDTASPQLL
DPERPGSQHELSCAYRQFPDRSSLCYGFALDHSRLVEDRHFHTQACEGGRCEAGRYFLGA
PPTGRDPWWGSRAALPLTKASPESREAYENSMPHITSIHRIHGRGHWDEDSVVSSPDPGS
ASESGDRYRTEQYQNSPHEPSKIETLIRATQQMIKEEENRLQLRKAPPDQLASINGAGKK
HSLCFANYQQPPPAGEVCHSSALASRSPCDHIQQREGKMLSPHENDYDNSPTALSRISSP
SSDRITKSSLILAKDYLHSDMSPHQTAGDHPAISPNCFGSHRQYFDKHAYTLTGYALEHL
YDSETIRNYSLGCNGSHFDVTSHLRMQPDPAQGHKGTSVIITNGS
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaagtctaaaaatgctgcccggacgaggagggagaaagaaaacagtgaattt
tatgaactggctaaattactgcctttaccctcagccatcacctcccaactggacaaagca
tccatcatcagactcacgaccagctatctcaaaatgagagtagtctttccagaagggctt
ggggaggcgtggggccacaccagtcgaaccagccccttggacaacgttggtcgcgaactc
ggctctcatctactccagactctggatggcttcatcttcgtggtggccccagatgggaag
atcatgtacatttcagagacagcttcagttcacctgggcctttctcaggtagagctgact
gggaacagcatctatgaatatatccaccctgctgaccacgatgagatgacagcagtgctc
acagcccatcaaccctaccactcccactttgtacaggagtacgagatcgaacgctccttc
tttctaaggatgaagtgtgttttggccaagcggaatgctggcctcacctgcggtggctac
aaggtcattcactgtagcggctacctgaagatccgccagtacagcctggatatgtctccc
tttgatgggtgctaccaaaatgtgggcttggtggctgtgggtcactccctgcctccgagc
gctgtgacagagatcaaactacacagcaacatgtttatgttccgagccagtctggacatg
aagcttattttcctggactccagggtggcagagctgactggatatgaacctcaggacttg
attgagaagaccctgtaccatcacgtgcatggctgtgacaccttccacctgcgctgtgca
caccacttactgttggtgaagggacaagtgaccaccaagtactacaggttcttggcgaag
catggcggctgggtctgggtgcagagttacgccaccatcgtacacaacagccgctcctcc
aggccgcactgcatcgtcagtgtcaactacgtcctcacagacacagaatacaaaggactg
cagctctccctggaccagatatcagcctctaagcccactttctcctataccagcagttcc
actcccactattacggacaacaggaagggggccaagtcaaggctctccagtagcaagtca
aaacccagggcctccccatatccccagtattcgggattccacactgagagatcggaatct
gaccatgacagccaatggggtggaagtcccctgactgatactgcctccccacagctcctg
gacccagagaggcctggctctcagcacgaattgtcctgtgcatacaggcagttcccagat
cgcagttcgctctgctatggctttgctctggaccattccaggctggtggaggacaggcac
ttccatacccaagcctgcgagggagggcggtgcgaggcaggcaggtatttcctgggagca
ccacctactgggagagatccctggtggggctctcgagcagctttgccacttaccaaggcc
tccccggagagcagagaggcttatgagaacagcatgccgcacatcacctccatccacaga
atccacggtcgaggtcactgggatgaagatagtgtggtcagctctccagatcctgggtca
gccagtgaatccggtgaccgataccgcaccgaacagtatcaaaatagcccacatgaacct
agcaaaattgaaactctcataagagccacccagcagatgattaaggaggaagagaacaga
ttacagctaaggaaagcccctccagaccaactggcttccattaatggagctgggaaaaaa
cactccctctgttttgcaaactatcaacagcccccaccggcaggtgaggtctgccacagc
tctgctcttgccagcaggtcaccatgtgaccatatccagcagagagagggaaagatgctc
agccctcatgaaaatgactatgacaacagccccactgcactgtctaggataagtagtcct
agttctgatcgcattacaaagtctagtttaatcctggctaaagactatctacattcagat
atgtctccccatcagacagcaggagaccatcctgccatctctccaaactgttttggctcc
caccggcagtatttcgataagcatgcctatacattgactggttatgccctggaacactta
tatgacagtgagactattagaaactattctttgggctgcaatggctcacactttgatgtg
acttcccatctaaggatgcaaccagacccagcacaaggacacaagggaacatctgttata
ataaccaatggaagttga
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integrated database retrieval system
