Mus pahari (shrew mouse): 110326745
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Entry
110326745 CDS
T05929
Symbol
Arid5b
Name
(RefSeq) AT-rich interactive domain-containing protein 5B isoform X1
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110326745 (Arid5b)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Helix-turn-helix
ARID
110326745 (Arid5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
Motif
Other DBs
NCBI-GeneID:
110326745
NCBI-ProteinID:
XP_021060985
Ensembl:
MGP_PahariEiJ_G0030830
LinkDB
All DBs
Position
9:complement(33236331..33417259)
Genome browser
AA seq
1187 aa
AA seq
DB search
MEPNSLQWVGSPCGLHGPYIFYKAFQFHLEGKPRILSLGDFFFVRCTPKDPICIAELQLL
WEERTSRQLLSSSKLYFLPEDTPQGRNSDHGEDEVIAVSEKVIVKLEDLVKWAHSDFSKW
RCGLRATPVKTEAFGRNGQKEALLRYRQSTLNSGLNFKDVLKEKADLGEDEEETNVIVLS
YPQYCRYRSMLKRIQDKPSSILTDQFALALGGIAVVSRNPQILYCRDTFDHPTLIENESV
CDEFAPNLKGRPRKKKTCPQRRDSFSGSKDPNNNCDGKVISKVKGEARSALTKPKNNHNN
CKKTSNEEKPKLSIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAA
QKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPLPP
IKPRKQENNTQENENKTKVSGNKRIKQEVAKNKKEKENTPKPQDTSEVSSEQRKEEETLS
HKSVPEPLPAPEVKRKPEGHKDLGARGPVSRADPEKGNETDAGSNSEKEAEEVGDKGLAP
LLPSPPLPPEKDSAPTPGGKQPLASASTQMDSKQEAKPCCFTESPEKDLQGAPFSSFSAT
KPPLASQNEVEEEQLPATANYIANCTVKVDQLGSDDIHTALKQTPKVLVVQSFDMFKDKD
LTGPMNENHGLNYTPLLYSRGNPGIMSPLAKKKLLSQVSGASLSSSYPYGSPPPLISKKK
LIAREDLCSGLSQAHHSQSSDHTAVSRPSVIKHVQSFKNKASEDRKSINDIFKHDKLSRS
DAHRCGFSKHQLGSLADSYILKQETQEGKDKLLEKRAVSHAHVPNFLADFYSSPHLHSLY
RHTEHHLHNEQSSKYAARDAYQESENGAFLSPKHPEKIHVNYLASLHLQDKKVAAAEAST
DDQPTDLSLPKNPHKPTSKVLGLAHSASGSQEIKGTSQFQVVSNQSRDCHPKACRVSPMT
MSGPKKYPESLARSGKPHQVRLENFRKMEGMVHPILHRKMSPQNIGAARPIKRSLEDLDL
VIAGKKARAVSPLDPAKEASGKEKASEPESEGSKGAYGGHSGAASEGHKLPLSSPIFPGL
YSGSLCNSGLNSRLPAGYSHSLQYLKNQTVLSPLMQPLAFHSLVMQRGIFTSPTNSQQLY
RHLAAATPVGSSYGDLLHNSIYPLAGINPQAAFPSSQLSSVHPSTKL
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaactcactccagtgggtcggctcaccgtgtggcttgcacggaccttatatt
ttttataaggcttttcaattccaccttgaaggcaaaccaagaatcttgtcccttggcgac
tttttctttgtaagatgtacgccaaaggacccgatttgcatagcggagctccagctgttg
tgggaagaaaggaccagccggcaacttttatccagctcgaaactttatttcctccccgaa
gacactccccagggcagaaatagcgaccatggcgaggatgaggtcatcgctgtctctgaa
aaggtgattgttaaattagaggaccttgtcaaatgggcgcattctgatttctccaagtgg
aggtgtgggctccgagccactccggtgaaaactgaggcctttgggagaaacggacagaag
gaggctctgctcaggtacaggcagtcaactctcaacagtgggctcaacttcaaagacgtt
ctcaaggaaaaggcggatctcggggaagatgaggaagaaaccaacgtgattgtgctcagt
taccctcagtactgtcggtaccggtccatgcttaaacggatccaggataagccatcatcc
atcctcacagaccagtttgcgttagccctggggggcatcgcagtggtcagcaggaacccc
cagatcctgtactgccgggatacctttgaccaccctactctcatagaaaatgagagtgtg
tgtgacgagttcgcgccaaatcttaaaggcagacctcgcaaaaagaaaacatgtccccag
agaagagattccttcagtggttcaaaggaccccaacaataactgtgacggtaaagttatc
agcaaggtgaaaggggaggccaggtcagccttgaccaagccgaagaataaccacaataac
tgtaaaaaaacctcaaatgaagaaaagccaaagctgtccattggcgaagaatgcagggca
gatgaacaagccttcttagtggccctgtataaatacatgaaagaaagaaaaacgcccatc
gagcgaattccctacttgggtttcaaacagattaacctttggactatgtttcaagctgct
caaaaactgggaggatatgaaacaataacagcccgccgtcagtggaaacatatttatgac
gagttaggtggtaatcctgggagcaccagtgcggccacctgtactcgcagacactacgaa
aggttaatcctgccatatgaaagattcattaagggagaagaagataagcctctgccgcca
atcaaacctcggaagcaagaaaacaatacgcaggaaaatgagaataaaacaaaagtctcg
ggaaacaaacgtatcaagcaggaagtagccaaaaacaagaaagagaaagagaacaccccc
aaacctcaagatacatctgaggtttcatcagagcaaaggaaggaagaggagacgttaagc
cacaaaagcgtcccagagccactccctgctcctgaagtaaagaggaaaccagaagggcac
aaggatcttggagcgaggggcccagtgtccagagcagacccagaaaagggcaatgaaact
gacgcaggttccaacagcgagaaagaagctgaggaggtgggagataagggccttgcccct
ctgcttccaagccctcccttgcctcctgaaaaagattccgctcctaccccaggaggcaaa
cagccccttgcctctgccagcacccagatggactcaaagcaagaagccaaaccctgctgc
tttacagagagccctgagaaggacctccaaggagcacctttctccagcttctccgccacc
aagccaccactggcaagccagaacgaggtagaggaagagcagcttcctgccacggccaat
tacattgccaactgcactgtgaaggtggaccagctgggcagtgacgacatccacactgcc
ctcaagcagaccccgaaggtccttgtggtccaatcatttgacatgttcaaagacaaagac
ttgaccggccccatgaatgagaaccacggacttaactacacgcccctgctttactcccgg
ggcaaccccggcatcatgtccccattggctaagaaaaagcttttgtctcaggtgagtggg
gccagcctctccagcagctatccctatggctccccacctcctttgatcagcaaaaagaaa
ctcattgccagggaagacttgtgctcgggtttgtctcaagcccaccacagccaaagctct
gatcacacggctgtgagccggccttccgtaatcaaacatgttcagagcttcaaaaacaag
gcctccgaagacagaaagagcatcaacgacatcttcaagcacgacaaactgagccggtct
gatgctcatcgctgtggcttctccaagcaccagctcggctccctggcagactcctacatc
ctcaaacaagaaacacaggagggcaaggataaactgttagagaagagagcagtctcccat
gcccacgtgcccaatttcctggccgacttctactcatccccgcatctccatagcctctac
cggcacacagagcaccatcttcataatgaacagtcctccaagtatgctgctcgggatgcg
taccaggaatccgaaaacggcgcctttctttctcccaagcacccggagaagattcacgtc
aattatctcgcatctctccacctgcaagataagaaggtggcagcggcagaagcctccaca
gatgatcaacccacagatctgagccttcccaagaacccacataaaccaaccagcaaagtc
ctgggcctggcccactccgcctcggggtcccaggagatcaaaggcacctcccagttccag
gtcgtcagcaaccagagtcgagactgtcatcccaaagcctgccgggtatcgcccatgacc
atgtcgggccctaagaaataccccgagtcacttgcaaggtcaggaaagcctcaccaggtg
agactggagaacttccgaaaaatggaaggcatggtccatcccatcctgcaccggaagatg
agcccgcagaacattggagctgctcgccccataaagcgcagcctcgaggatttagatctg
gtgatcgccgggaaaaaggccagggctgtgtctcccttggacccggccaaggaggcttct
gggaaagaaaaggcctcggaaccggagagcgagggcagcaaaggcgcctacggtgggcat
tctggggctgcctcagaagggcacaagctccctctctccagccctatcttcccgggtttg
tattctgggagcctgtgtaattcaggcctcaattccaggctcccggccgggtactcccat
tctctgcagtacttgaagaaccagacggtgctttctcctctcatgcaacccctggctttc
cactcgctcgtgatgcagagaggaatttttacatcgccgaccaattctcagcagctctac
agacacttggccgcagccacccctgtaggaagttcctacggggacctgttgcacaacagc
atctacccattagctggtatcaaccctcaggctgccttcccgtcttctcagctgtcatct
gtacaccctagcacaaaactgtaa
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