Mus pahari (shrew mouse): 110326889
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Entry
110326889 CDS
T05929
Symbol
Tspear
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mpah03037
]
110326889 (Tspear)
04990 Domain-containing proteins not elsewhere classified [BR:
mpah04990
]
110326889 (Tspear)
Cilium and associated proteins [BR:
mpah03037
]
Other cilia and associated proteins
Stereociliary proteins
110326889 (Tspear)
Domain-containing proteins not elsewhere classified [BR:
mpah04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
110326889 (Tspear)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPTP
Motif
Other DBs
NCBI-GeneID:
110326889
NCBI-ProteinID:
XP_021061177
Ensembl:
MGP_PahariEiJ_G0030909
LinkDB
All DBs
Position
9:42374488..42573991
Genome browser
AA seq
670 aa
AA seq
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MSALLMLCAALLLLGTPGRGARPWEPCTDLRPLDILAEVIPLNGATSGIRMVQAEGVRGL
QFSATEPHTASFPASRIFSSCDLFPEEFSIIVTLRVPNLPPKKNEYLLSLLAEERDTLLL
GLRYSPTQLHFLFLSEDLAGAWQTRVSFWSPGLMDSRWHTLILAVSQGSFSLTTDCGLPV
DIMADVPFPPTLSVRGARFFIGSRKRTKGLFTGVIRQLVLLPGSDATPQLCPSRNARLAE
LSIPQVLKRLTGKPDDNEVLKYPYEADMKVTLGSRPPCTKAEGAQFWFDAAQKGLYLCAG
SEWVSVLAAKTKLDYVEEHQSLHTNSETLGIEVFSIPGVGLFAAAANRKARSAIYKWTDG
KFVSYQNIATHQAQSWRHFTIGKKIFLAVANFGPNERGQEFSVIYKWSPRKLKFTLYQRI
ATHSARDWEAFEVDGEHFLVVANHREGDNHNIDSVVYRWNPSSQLFEANQSIATSGAYDW
EFFTVGPYSFLVVANTFNGTSTQVHSHLYIWLVGAFQLFQSFLTFGAADWEVFHIGERIF
LAVANSHSYDVQMQAQNDTYILSSVIYELNVTAQTFVKFQDIPTCSALDWEFFSVGEDHF
LVVANSFDGNTFSVNSIIYRWQGYEGFVAVHKLPTFGCRDWEAFNTTAGSYLIYSSAKEP
LSRVLKLRTG
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgctgctgatgttgtgtgcggcgctcttgcttctgggtacccccggccgtggc
gcccggccctgggagccctgcacagaccttcgtcccctggacattctggcagaggtgatc
cctttgaatggagctacaagtgggatccggatggtgcaggcggagggtgtgcggggcctc
cagttctcagccaccgagccccataccgcgagcttccccgcctctagaatcttctccagc
tgcgatctcttccctgaagaattctccatcatcgtcaccttgagagttcccaaccttcca
cccaagaagaatgaatacctgctctccctgctggcggaggagagggacacgctactgctc
ggcctgaggtactcacccacacagctgcacttcctatttctcagcgaggacctggctggt
gcctggcagacccgcgtgtccttctggagccctggcctcatggacagccgatggcacact
ctgatcctggctgtgtcccaagggtccttttccctcaccacggactgtggcctcccggtg
gacataatggctgatgttcccttcccacccaccctatcagtaagaggagcccggttcttc
attggcagccggaagagaaccaaaggcctattcacaggcgtgataagacaattggttttg
ctgcctggctcagatgccacccctcagctgtgtcccagcaggaacgccaggctggctgag
ctgtccatcccccaggtgctgaagagactcacagggaaacctgatgataatgaggtgctg
aaatatccctatgaagctgacatgaaagtaaccctgggatcccggccaccgtgtaccaag
gcagagggtgcccagttctggttcgatgctgcccaaaaggggctatacctgtgtgctggc
agcgaatgggtctccgtgttggcagccaagaccaagctggactacgttgaagaacaccag
agtctgcacaccaactcagagacactgggcattgaggtgttcagcatccccggggtggga
ctcttcgcagccgcagccaaccggaaggctagatcagccatctataaatggacagatggg
aaatttgtctcctatcagaacatcgccacgcaccaggcgcaatcatggcgacatttcacc
attgggaaaaagatcttcctggcagtggccaactttgggccaaatgaaaggggtcaagag
ttctcggtgatctacaaatggagccccagaaagctgaagttcaccctttatcagaggatt
gccacccacagtgcccgtgactgggaggcctttgaggtggatggagagcacttcctggtg
gtagccaaccatcgagaaggggacaaccacaacatcgacagcgtggtctacaggtggaac
cccagcagccagctctttgaagccaatcagtccattgccacatcgggtgcctacgactgg
gagttcttcactgtggggccatactccttcctggtggtggccaacaccttcaatggcacc
tccacccaggtgcattcccacctgtacatctggcttgtcggggccttccagctcttccag
tcattcctgacgttcggcgctgcagactgggaagtcttccacattggcgagaggatcttc
ctcgcggtagcaaacagtcacagctacgacgtgcagatgcaggcacaaaatgacacctac
atcctcagctctgtcatctatgagctgaacgtcaccgctcagacctttgtcaagttccag
gacatccccacctgcagtgcactggactgggagttcttctccgtgggagaagatcacttc
ctggtggttgcgaactcctttgacggaaacaccttctcagtaaacagtattatctacagg
tggcaaggctatgagggcttcgtggccgtacacaaactccccacttttggctgtcgggac
tgggaggcctttaacaccactgccggctcatacctcatctactccagcgccaaggagccc
ctctccagggtcctgaagctgaggactggctga
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