Mus pahari (shrew mouse): 110326970
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Entry
110326970 CDS
T05929
Symbol
Cfap54
Name
(RefSeq) cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mpah03037
]
110326970 (Cfap54)
Cilium and associated proteins [BR:
mpah03037
]
Motile cilia and associated proteins
Sperm associated proteins
110326970 (Cfap54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
DUF7050
Vfa1
Motif
Other DBs
NCBI-GeneID:
110326970
NCBI-ProteinID:
XP_021061297
Ensembl:
MGP_PahariEiJ_G0031357
LinkDB
All DBs
Position
9:81941582..82229216
Genome browser
AA seq
3193 aa
AA seq
DB search
MASSRSSSSSSEESPDSETSVSPVHLPPTPPPTSTAILKSPSESKSSSTNPPQCTCSEDS
LPSAAFYGPLDSKNPLLASCEKEIRELLGFMKKNKALATSEEQKHEFHRRCATTLFNIWT
KYAPRLPSDYYNEKLLKVGDSLCQIKEYKLALLQCYGRYLQEFVTDFDEQKEDVNHFKTV
FFPKGFGDETARLTFHALSGKNICNYQLVCESDANLQNEESVRQCMHILSSFRLIMQVAL
PQEHLCWIIFNGTLYIYTICRKLMVIGRSSMALEFLLWASMCMESSVPLLSVRYLTWRAT
LYTAVCQCHYDCQDGIHGEAFARRALAKIDELRQLELMSSSSSLETSRKYYREATIKMAV
MIFKRGVFESRRKNKNMLRPKLRLNLKEVQSLPWPRTVTERLLDELLDSTSSRFLAVLEA
LSDSNRRILQTGPLVTDEMELRDVVSELFMAGKELLILSNVPSSGKLDFPQTNLLENVIE
KRNAISVDASVRFAKLAFTYEEWGLFESLAGQLIQFLQKQASPESKKAEKDLILLLAVEP
LINVKRNRGFIFPLDTDKETQSIQNYLKHIACHESCVRTTFTEDTFNLAVILHFCVCVPT
KGVLPDKDIVVDIIELLWQRCKLGIQRLNIPKNDFTKYSHKISTNKWVYLLWQISEVIHC
YKLDDLDIVMVAEITLRLSEILESLGNPKRKFKKSADLSAKRGPDELPGTSKGVPEILPI
LKRAPVEQLFYAYELLDKAITGMSWKCMLTTLSDGSSVIDHCYVKDSHDLDGDTYKPIAS
NSYIMDLHLELIQAQHRIAVVLLDQLEVLQAPTVSTNTPAKGWEKLKKPRSTECFTELTV
MKKIRKNKLSKAIYLMQKALLLFEKDAVCETSRNLLTEANALIEKVEAEQNALYSYQKFL
GSSKIKKSRIPPPPILLARTHCSVILKPVPFISEVKASWYCILGCKAEGSYGKVRLNNNH
LPNSGEAIPADGRSFFEIKGLETNAHYIFAIAAYSSSGKLIGDAIGETTKPILIYPPLSA
VTARMYLTQVAYQIGNYEMAKKVFSPVWDYFVASPIQDEQSVICLSNIMTITQRRLHSNI
LADTSSILLYLFLRNIFVMSDIKIKEENLFCDNIKGNEIFPAQQVARLVECENVLVALEL
SNFLNDANFALQAVTQCYGLLAPIIYHNIILVPVIQILIKCVVVLQGIPSIIHSKKNISS
FESIQHMIACCIFYMTKILRSWKEYDLAIMLINYGKKMLDITSGCKSLFGIEQEENAEEG
ISKKTSRTKKPQQVLLPEKINEQLALLETHLLKTTKQINSTELSGSEDPIFLYPVVLNWT
VKGAMKEVMKFKQRPRFLEFFTQIMLKCMNDEKFHIMVEISAPVYDFLKRRNESLIGVKR
IKYKENVISRKALKSPRKFKAIVIEIGKGSDSTRRRRKKKKTLKDFFYKNPSIFDMTELE
RNRRTDVRKMAYRSLNDNLNPLILSYVKRKRFHQILLEELPWRAQMNLYLANAHFHLFLQ
KLTDRTKERLGSSYSSVSFRSCDPNLFSLFHSGTVLPTAKLTVDSYNAMLDVLNVSKKKK
HNQTPDIEDLSVLFNSKSDDNISKTKTQTIYESDSQLGIGVNIREKDRMLIWGLDHFMKI
FLCCRRAMVLAYRGGYWTLLQNCCRVFWNFSRELQILLKQTVDSCKTFPVSQDSFLCICV
LPFYLGAELLIDMLIRLQSTNSIKPFEEKGEFSIPSCYGNIKSDNGGSSLIFEHPLDDVN
VVDLRWIHDFVLKSLEVLYQVEKWETLVFLAIQFNIISHERYTEQVTPLLVYAQRQLVQR
IKELNGPDLSRQACARYEAENGEKITCRNFIGKRLKIDLSTPKNLAELEGSSDPLKTLIT
SEQKLAKQLVSVPLDVDDTLRCFRETLEKSKYHNRSVRHSRKLLSLFLAQTQGERGGMDN
SKFTPGKVEFCLGTEEMHMPTPPDLSQENFRVFSSVEKSKLPFSQLGLVISSYYQTIDVL
QASNQKSLKVQTLHSLGSLLIFADKKRAAFKCWSQALDDIFRKPDVLHNWKEFGTSLPGA
PSSSSSPGFKDYSEEFLSKFGIWGCLQGAMISAKIAQFIETANVKKRINSCILSALLFQS
LLRTTLPHPKAERSYAQYEITQLLPGIELFSDKYRADICSVIASLYYVIRELHYAKYNLI
VLPLLALYQYFVSVICQDIVRNLEARILKIEILIDLGFFSEAFYELSQIYYGKNMPCAIP
AGYKATMKVKITQSFDSGKPLTSKDNMQALEELINRGLPHILVNLGYQHLLNKFNFAKSY
FLISLAATINCIPDPSPKIMYYPVVTEKSKPNPQNLKDNENSHGQFLRFRDDYTLNTIKS
ILLMEAEEKVNSLLSETEHQCHGPLYLSSVTELEIMVEARLHLAAIALQRYRPAYSTAIL
YSTLKLLQDSKVFKKKLPEESCSPTSPETSTTESKDDSEFLDPISLNSREYFNIHLWLRC
RLMLVTSFISQIRGIGIMKESELTDCLSLIDEVCTEAKSADDTEVLAEFLMQAVVLGLQE
KHFKADIIQKLKEIISLLEGSEFLSPRSWLTLAKSLILMDDLTKAEKFKKASSKENKLIF
LNQAHRILIAQMLTFGETIEFPLSDGDYASPLQPLKNIYLPHVMLLAKIKLRIGHTMAKQ
VCSSSKKKDIGKWLPVLHMFDMALKVCRATTAEEYEVEAEILFQKGRIERQILMEEKMPI
AHVESFFEAIQISLKNDQNSGLIRDSYLEIALVYFYLKKPKKKVSATTLKPLPRRHSSVK
DPVATRAEMYSSLAWIAIRAAAQVSESVLGINLLIGKKSARTDKVNNMSLPNIPEFAAVD
LLSSYTDYLLENYQVVFQTSSSLVCENDDVYDCIDGRKRNLSKVDITWILLVRYYIHLQR
INNMSKLLASATPISGISLPDDTLLTSLYNSELILRQKEMHLFLKRFLQLYSSSCIDGFP
RELLQGLENISLEKVLYESSGKVHRDSSLQSDVSGKLTGCPSYTEISSEMAVQALNKELC
FQWYIPPLDKPPKDAEPMVLLLYAYNLKPLRILDIRVPTGNSLCVGTSWIPLRSVIAVHE
KLSNLAQIAEISLPSVPEVTSEENIYETIETIEPEEKPIDTDLENMILECCSEIEALFSQ
DKDKDKDKDKDKDKDKDKDKDKDKDKEPSPPMTKVPFDVSLPAIFSLERLFDLANGCIVS
VGSLFNWVVSIIQ
NT seq
9582 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctccagaagctcctccagctcttctgaggagtccccagactctgagacatcg
gtgtcgccggtgcatctgcccccaacgccgccgccgacctctaccgcgattctcaagtcg
cccagcgagtccaagtcgagctcgaccaacccgccgcaatgtacctgctccgaggactcg
ctgccctctgccgccttctacgggcccctggacagtaaaaacccgctcctggcctcttgc
gagaaggagatccgggagctgttgggctttatgaagaagaataaggctctagccacctca
gaggaacagaagcacgaattccatcggaggtgtgccaccacgctgtttaatatctggacc
aaatatgcccccaggctgccgtccgactattacaacgagaagctcctgaaggttggagac
agcctctgtcaaataaaagaatacaagctggctcttctgcagtgctatgggcggtatctc
caggagttcgttactgatttcgacgagcaaaaagaagacgtaaatcatttcaaaactgtc
ttcttcccaaaaggctttggagatgaaacggccagactcacatttcatgctttgagtgga
aaaaatatttgcaactaccagctggtctgcgaaagcgatgccaacttgcagaatgaggag
tctgtgagacagtgcatgcacatcttgtcctcctttaggctcatcatgcaggtggctctg
cctcaggagcacctttgctggattatcttcaacggtaccctttacatctacaccatttgc
cggaagctgatggtcataggacggtcttccatggccttggagttcctgctgtgggccagc
atgtgcatggagtcctctgtcccgctcctgtccgtcaggtacctgacatggagagccact
ctctacactgccgtctgccagtgccactatgactgccaggatggaatccacggggaggca
tttgctcggcgtgcgctagctaaaattgatgagttaaggcagctggaattaatgagctcc
tcttcttctctggaaacctcccgaaaatattacagagaggccacgataaagatggccgtg
atgatcttcaaaagaggagtattcgagtctagaagaaaaaacaaaaatatgttaagaccg
aagctaagactcaacctaaaggaagttcaaagtttgccctggccacggacggtcaccgaa
cggctgctggatgagctacttgacagcacctcatcccggtttctggctgtcttggaagcc
ctctctgactcaaacaggcgaatcctgcagactggaccactggttactgacgaaatggag
ctacgtgatgttgtgtcggagctgtttatggctggnaaagaacttttgatactttcaaat
gttccttcaagtggaaaactcgatttcccccaaacgaatctcctggagaatgtcatagaa
aagagaaatgctatttccgtggatgcttctgtgaggtttgcaaaactggctttcacgtat
gaagaatggggattattcgaatccctagctggacaacttattcagtttctccagaagcag
gccagccccgagtcaaagaaagcagagaaggatttaattcttctgcttgcagtcgaaccg
ttgatcaatgtgaagagaaacagaggtttcatctttcctttggataccgataaggagaca
cagtccattcaaaattatctaaaacacatagcttgtcacgagtcttgtgtgaggaccaca
ttcacagaggacacttttaacttggcggtaattcttcacttctgcgtctgtgtccctacc
aagggtgttcttccggataaggatatcgttgtggacataatagagcttttatggcagaga
tgcaagctaggaatccaaaggctcaacatacccaaaaacgacttcacaaaatattctcac
aagatcagcactaacaaatgggtttatctcctgtggcagataagcgaggtgatacattgc
tataaactggacgacctggacattgtgatggtggcggagatcacgttaagattaagtgaa
atactagagtctttgggaaacccgaaaagaaaattcaaaaaatctgcagatttatctgca
aagagagggcccgacgagttgcctgggacttcaaaaggggtcccagaaatccttccaata
ttaaagcgagcacccgtggaacagctgttttatgcgtatgaactccttgataaagcaatc
actggcatgagctggaaatgcatgttaactactttgtcagatggatcatccgtgattgac
cattgctatgtcaaggactctcatgacctcgatggagacacttacaagccgattgcatca
aacagctacataatggacctgcatcttgaattgattcaagctcagcaccgcatagctgtt
gtgctccttgaccaactggaagttttgcaggctccaactgttagcacaaacactcctgcc
aaaggttgggaaaagttaaagaagcctagaagcactgagtgtttcacagagttaactgta
atgaagaaaataaggaagaacaagctgtccaaagccatctacctgatgcagaaggctctc
ttactgttcgagaaagacgcagtgtgtgagacttcacggaacctgctgacggaagcgaat
gccttaattgagaaggtcgaagcagaacaaaatgccctatattcctatcagaagttcttg
gggagctcaaaaataaagaagagcagaatccctcccccacccatcctgctggcccgaact
cactgctctgtgattctgaagcctgtgccctttatctcagaggttaaggcgtcctggtac
tgcatcttgggttgcaaagcagaaggaagctatgggaaagtaaggttgaacaacaaccac
ctcccaaactcaggagaagcgataccagccgatggcagaagcttctttgaaattaaaggt
ttggaaacgaatgcacactacatttttgcgatcgctgcttactcgtccagcgggaaactc
attggtgatgctattggggaaacaacgaaaccaattctcatttacccgcctctctctgct
gtcaccgctcggatgtacctgacacaggtcgcttatcagatcggtaactatgagatggcc
aagaaagtcttctcaccagtctgggattattttgttgcctctccgatacaggacgagcag
tctgttatctgcctaagcaacatcatgaccataacacagagaaggcttcattccaacatc
ttggcagacacttcttcgatcctcttgtaccttttcctcagaaatatcttcgtgatgagt
gacattaaaattaaagaagagaatctcttctgtgataatattaaaggcaatgagattttc
cccgcccagcaagttgctagactggtggagtgtgagaacgtgctagtagctctggaactc
agcaacttcctcaatgatgccaacttcgcccttcaagcagtaacccagtgctatgggctc
cttgcacccattatctaccacaatatcattttggtacctgtcatccagatcttgataaaa
tgtgttgtggttttgcaaggaataccaagtattattcactcaaagaaaaatatttcaagc
tttgaaagtatacagcacatgatagcttgctgcatcttctacatgacaaagattctacgt
tcctggaaggagtatgacctggcaataatgcttataaattatgggaaaaagatgttggat
atcacatcagggtgcaagtctctttttggtattgagcaagaggaaaatgcagaggagggt
atttctaagaaaacttcaagaaccaagaagccacagcaggtgctgctgcctgaaaagata
aatgaacagctggccttgttggagacacatctactcaaaacgacaaagcagatcaactca
actgaactatctggatcggaggacccgatcttcctttaccccgtggttttgaactggaca
gtgaagggtgccatgaaggaagtcatgaaatttaagcaaagaccgagattcctggaattc
tttacacaaattatgctcaaatgcatgaacgatgagaagtttcatatcatggtggagatc
tctgcccctgtttatgacttcttgaaaaggagaaacgagtcccttattggagtgaaaagg
ataaaatataaggagaatgtcatttctaggaaggcactcaagtctcccaggaagtttaaa
gccatagtgatcgagatcgggaagggttcagactcaacaagaagacgaaggaagaaaaag
aaaaccctcaaagactttttctacaagaatccatccatttttgatatgacagagctggaa
agaaacagacgaactgatgtcaggaaaatggcatatcgaagcctgaatgataacttgaac
cccttaatcttatcgtatgttaaacgaaagagattccaccaaatcctgcttgaggagctg
ccttggagagctcagatgaacctatatctggcaaatgcacacttccacttgttcttacaa
aagctgaccgaccgcacaaaggagagacttggctcctcgtattcaagcgtcagcttccgg
tcatgtgaccctaacctcttctcactgttccactctggaacagtgttaccgacagcaaag
ctgactgtagacagctacaatgcaatgctagatgtcctcaatgtctctaagaaaaagaag
cacaaccaaaccccagatatagaagatttatctgtacttttcaattccaaaagcgatgat
aacatttccaagacgaaaacacaaacaatttatgaatcagactctcaattaggcattggt
gttaatatcagagagaaggatcgaatgctgatttggggactggatcattttatgaaaatc
ttcttatgctgcaggagagcgatggttcttgcttaccgtggtggctactggactctactg
cagaattgctgcagggtcttctggaacttctcccgggagctgcagatactactgaagcag
actgtggatagttgcaaaacctttcctgttagccaggatagctttctctgtatctgtgtg
ctacccttttacctgggcgcagaactgcttattgacatgttgataaggctgcagagcacc
aattctatcaagccgttcgaagagaaaggcgaattcagtattcccagctgttacgggaac
atcaaatctgataacggaggttccagcctgatttttgaacatcctttggatgatgtcaac
gtggtagatttgagatggatccatgactttgtgttgaagtctctggaggttctataccaa
gtggagaagtgggaaacactggtgtttcttgccattcagttcaacattatttcacatgag
aggtacacagagcaggtgacaccgctgttggtgtatgcgcagcgccaactggtccagcgg
ataaaagagctgaatggtcctgatctctcccgtcaggcttgtgccagatacgaggctgaa
aatggagaaaagatcacctgtcgaaactttattgggaagcgcctcaagattgatctttcc
acacccaagaacttggctgagctagaaggcagttctgaccccctgaagacgctcatcact
tcagagcagaaactagccaaacagcttgtctctgtgcccctggatgtggatgacactttg
agatgcttcagagagaccctggaaaagtccaaatatcataacagatcggtccgacacagc
agaaagctgctttctttatttcttgcacagacacaaggtgaaagaggagggatggacaac
tcaaaatttactccagggaaggtggagttttgcctgggaacggaagagatgcacatgcca
acaccccccgacctttctcaagaaaacttccgagtctttagctcagtggaaaaaagcaaa
cttcccttctcccagctggggctggtcatttcttcctactaccaaactattgatgttctc
caagccagcaatcaaaagagccttaaagttcagaccctgcactctcttggaagcctcctc
atctttgcagataagaaaagggctgcttttaaatgttggagccaagctctcgatgacatc
ttcagaaaaccagatgtgctgcacaactggaaagaatttggcacctctctccccggtgcc
cccagcagctcctcatctcccggtttcaaagactacagtgaagaatttctatcaaaattt
ggcatctgggggtgtttgcaaggggcaatgatctcagcgaagatagcacagtttattgag
actgcgaatgttaagaaaagaatcaactcttgtatattgtctgcattgctttttcagagt
ctgcttcgtaccacactcccacatcccaaagccgaacgtagctatgctcagtacgaaatc
acccagctcctccctggcatcgagctcttctcggacaaatacagggctgacatctgcagt
gttatcgcaagcctgtactatgtcatccgcgagctgcactatgctaagtacaatctcata
gttctgcctcttcttgcactgtaccaatattttgtgtctgtcatttgccaagacatagtc
agaaatctagaagcaagaatcctcaagatcgaaatccttatagatttaggcttcttttcc
gaagccttttatgagctatcccagatttattatggaaaaaacatgccatgcgccatacct
gctggctacaaagcaacaatgaaagttaagataactcaatcattcgattctggaaaaccc
ctcaccagtaaagacaacatgcaggcacttgaagagctaataaacagaggtttgccccac
attctggttaaccttggctaccagcatctcttaaacaaatttaattttgccaagtcatac
ttcttgataagtttggctgcgacaatcaactgtattcccgatccttcaccgaaaataatg
tactacccagttgttactgagaagagcaaacccaacccccaaaacctaaaagataatgaa
aactctcatggtcagtttttgagatttagagatgactacacgcttaacaccatcaagtcc
attttactgatggaggcagaggagaaggtcaactccctgctgtcggagacagagcaccag
tgccacgggcccctctatctgtcctctgttacggagctggagatcatggtggaggccagg
ctgcacctggcagcaatcgccctgcagagatacaggccagcctacagcactgctatacta
tattccacactgaagcttctccaggattcgaaggtgtttaaaaagaaactgcccgaagag
tcatgcagccccacctctccagaaacttctaccacagaaagtaaagatgacagtgagttt
ttagaccccatttccctgaactcccgggaatacttcaatattcacctctggctgaggtgc
cgcttgatgctggtaacttcattcatctcgcagattcgtggtattggaatcatgaaagag
agtgagttgacagactgtctgagcctcatcgatgaagtatgcacagaggcaaagagtgcc
gacgacacagaagtcctggctgagttcctaatgcaagctgtggtcctaggccttcaggag
aagcactttaaggcagacatcatacaaaagcttaaggaaattatcagtttgctggaagga
agcgaattcctttctcccagatcctggttaactctggcaaaaagcctcattctgatggat
gacttaacaaaagctgagaaattcaaaaaagcatcttcaaaagagaacaaattaattttc
ttgaatcaagctcacagaattcttattgcccagatgttaacttttggagagaccattgaa
ttccccctctcagatggtgactatgcaagcccattacagccgttaaagaatatctacctt
cctcatgtcatgctactggccaaaataaaactgaggattggacacaccatggccaagcag
gtatgttccagcagcaagaagaaggacatcggtaagtggctgcccgttcttcacatgttt
gacatggctttgaaggtctgtagagcaaccacagcagaggaatatgaagtggaggctgaa
attctatttcagaaaggcagaatagagcgtcaaatactgatggaggagaaaatgccaatc
gcacacgtcgagagttttttcgaagctattcaaataagcctgaaaaatgaccagaactca
gggttgataagggattcttacctcgaaatcgccctggtgtatttctatctgaagaagcca
aagaagaaggtttcagccacaacactcaagcctcttcccagaaggcacagttctgttaaa
gacccagtagcaactcgagctgagatgtacagctcactggcctggattgcaatacgagct
gctgcacaggtcagtgaatctgtactggggatcaacctcctgataggaaagaagagtgcc
aggaccgacaaagtcaataacatgtcattgccaaacatcccagagttcgccgctgtggat
cttctgtcttcctacacagattatttactcgaaaactaccaagttgttttccagacttcc
agctcacttgtgtgcgaaaatgatgatgtgtatgactgtatagatgggagaaagaggaat
ctctccaaagtggatattacgtggatccttctcgttcgctactatattcacctacaaaga
atcaacaacatgagcaagctgctagcatctgccactccgatctcagggatttctttgccc
gatgacacacttctcacatccctgtacaactctgaattgattttgcgccaaaaagaaatg
catctcttcctgaaacgattcttacagctctactcttcttcatgcattgatgggtttcca
agggaacttcttcaaggtttggaaaacatttcactggagaaagttctgtacgaatcatca
ggcaaggtccatcgggacagttccctgcagtctgatgtatctggaaagctcaccggctgc
ccatcttatacagaaatctcatcagaaatggcggttcaagctttaaacaaagaactttgc
tttcagtggtatattcctcccctggacaaacctccaaaggatgcggaacctatggtttta
ttattatatgcatataacctgaagcccctgaggattttggatatcagagttcctactggt
aacagcctgtgcgttggcacctcctggattccactgaggagcgtcattgcagttcacgag
aaactatctaatcttgcacaaatagctgagatatccttaccatcggttcctgaagttact
tcagaggaaaatatctatgaaacaatagaaacaatagaacctgaggaaaaaccaattgat
acagacttggaaaacatgattctcgaatgttgctctgaaatagaagctctgttttcccag
gacaaagacaaagacaaagacaaagacaaagacaaagacaaagacaaagacaaagacaaa
gacaaagacaaagacaaagagccctcacctccaatgaccaaggttccatttgacgtctcc
ctgcctgctatattcagcctcgagagactttttgatcttgcaaatggttgtatcgtgtca
gtaggaagccttttcaactgggtggtgtcaattattcagtga
DBGET
integrated database retrieval system
