Mus pahari (shrew mouse): 110327135
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Entry
110327135 CDS
T05929
Symbol
Exosc1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110327135 (Exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110327135 (Exosc1)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110327135 (Exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
110327135 (Exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
110327135
NCBI-ProteinID:
XP_021061524
Ensembl:
MGP_PahariEiJ_G0014449
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All DBs
Position
1:complement(153342645..153352740)
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AA seq
199 aa
AA seq
DB search
MAASMAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLTKTSENGALPVVSVM
RETESQLLPDVGAVVTCKVSSINSRFAKVHILYVGSTPLKNAFRGTIRKEDIRATEKDKV
EIYKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPK
THTKEFRKVARVQPEFLQT
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaagcatggcacccccagtgaggtactgcatccccggcgaacgtctgtgtaac
ttggaggaaggcagccccggcagcggcacctacacccggcacggctacatcttttcgtcg
ctggctggctgcctgacgaagaccagcgagaatggcgcgctccccgtggtgtcagtgatg
agagaaacagagtcccagttgcttccagatgtgggagctgtcgtcacctgtaaggtctct
agcatcaactcacgatttgccaaagtacacatcctgtatgtgggatccacaccactcaaa
aatgcttttcgaggaactatccgcaaagaagatatccgagcaactgaaaaagacaaggta
gaaatttacaagagtttccggccaggtgacatagttttggccaaagttatctccctaggt
gatgcacagtccaattacctgctaactactgctgaaaacgagctaggagttgtggtggcc
cacagtgagtcgggtgtccagatggttcccatcagctggtgtgagatgcagtgccccaag
acccacactaaggaattccgaaaagtagcccgagtccagcccgagttcttacaaacctaa
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