Mus pahari (shrew mouse): 110327158
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Entry
110327158 CDS
T05929
Symbol
Ccdc36
Name
(RefSeq) interactor of HORMAD1 protein 1
KO
K26085
interactor of HORMAD1 protein 1
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpah03036
]
110327158 (Ccdc36)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
110327158 (Ccdc36)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
IHO1
Nsp1_C
Motif
Other DBs
NCBI-GeneID:
110327158
NCBI-ProteinID:
XP_021061558
Ensembl:
MGP_PahariEiJ_G0015555
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All DBs
Position
10:complement(101887611..101911241)
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AA seq
575 aa
AA seq
DB search
MNFNVWNVKEMLSIPSGSGVTRPSNWDNHQTDCSLSDSQFLFGSQFCPENSETLLPSLDA
GAYLRHPKQTQQDSVDNEPSIFTKYQAKPQLLGGNTKDEGLFSLPLPVGKSKGLSKQFEE
KKRRATDQSDSETLHSFVSHFPEVINKLQTSVEKSEEHLSSRSQSILDSVETIAKTFQET
ARVQRDLMVESVRDKGSVEQAILEIQRTCAARQAEFMEMKSTLKNLEVLVVEQSKNLQQF
CDNLGQLIVPGILEELKKITSVPQVAGHLKDSTSQTSPSLTQSLHFTGQEKYPSEEPATC
QAQEAPAGNPSRSSQRPGECGVWDEGAESDVFQKAALPTDGLHRGNGHVKNKTMQTYCKN
WVMTTRSLSNHFSNLPSQKAGNDQGLIAQGASQRDLNKFEARVKNACPEYGAQSMCSFDS
LEQSATEQKGGTCRKLRRGKKQQPRRSKRGGLLDRKPEEQTSRKACAFIARHHCPQSPVC
NPQGPLICWLTPRSSTKSTCHILGRTGETSQTARATQGDLLQYSQRSSTDSSSQEDQQIN
WFSDLGLENLEPPLCKKGGTNLLCDPDFDSSDDNF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaatgtctggaatgtcaaagagatgctcagcatcccctcaggctctggggtc
actagaccgtctaactgggataatcatcagacagactgttctctcagcgattcccagttc
ctctttggatctcagttctgtcctgaaaattcagagactctgttaccgtccttggatgct
ggtgcttatttaagacacccaaaacagacacaacaggattctgtggataatgaacctagt
attttcacaaaataccaggcaaagccccagctgcttggaggcaatacaaaagatgaaggc
ttattttctcttcctttgccagttgggaaatcaaaaggactctcaaaacagtttgaggag
aaaaaacgaagggcaacggaccaatctgacagtgagaccctgcacagctttgtttctcat
tttccagaagtcattaacaagttgcagacatctgtggaaaagtctgaggaacatctcagc
tctagaagccagtctattttagattctgtggagaccatagccaagacttttcaagagact
gcacgggtccagcgtgacctgatggttgagtcagtgagagacaaaggcagcgtggagcag
gccatccttgagatccagaggacgtgtgcagctagacaagctgaatttatggagatgaaa
tccaccctgaagaaccttgaagttttagttgtggagcagagtaagaacttgcagcagttc
tgtgacaacctgggccagctcattgtgcctggtatcctagaagagctgaaaaaaatcacc
tctgtgcctcaggtggctgggcatctgaaagacagcacctctcagacctcaccatctctg
acccagagcctccattttactgggcaggaaaagtatccctctgaggagccagctacttgt
caggcccaggaggctcctgcaggaaatcccagtaggagttcccagaggcctggggagtgt
ggtgtctgggatgaaggagcagagagtgatgtttttcaaaaggctgcattgccaacagat
gggctccatagaggcaatgggcatgtgaagaacaagaccatgcagacttactgcaagaac
tgggttatgaccaccagaagcctcagtaaccacttctctaacctcccaagccagaaggct
ggcaatgaccaaggtctgattgcccaaggagcttcccagcgggacttaaataagtttgaa
gccagagtgaagaatgcctgccccgaatatggggcccaaagcatgtgttcttttgactca
cttgaacagtcagcaactgaacagaaaggcgggacctgcaggaaactgaggagaggcaag
aagcaacaacccaggagatcaaagagaggcgggcttctagatcggaagcctgaagagcag
acctcaaggaaagcctgtgctttcatagctaggcatcactgtccccagtctccagtgtgt
aatccacaggggcccctcatctgttggctgactccgagaagttccaccaagtcaacatgt
cacattttgggaagaacaggagagaccagtcagacagcaagggcaacgcaaggggacctc
ttgcagtattcccagcgctcttccacagacagcagctcccaggaggaccagcagataaat
tggttcagtgacctcggccttgaaaacctagagcctcctctgtgtaagaagggagggacg
aatttgctctgtgacccggattttgatagcagcgatgataatttctaa
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