Mus pahari (shrew mouse): 110327166 Help Entry 110327166         CDS       T05929                                  Symbol Smarcc1 Name (RefSeq) SWI/SNF complex subunit SMARCC1   KO K11649   SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C Organism mpah  Mus pahari (shrew mouse) Pathway mpah03082   ATP-dependent chromatin remodeling mpah04714   Thermogenesis mpah05225   Hepatocellular carcinoma Brite KEGG Orthology (KO) [BR:mpah00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     110327166 (Smarcc1)  09150 Organismal Systems   09159 Environmental adaptation    04714 Thermogenesis     110327166 (Smarcc1)  09160 Human Diseases   09162 Cancer: specific types    05225 Hepatocellular carcinoma     110327166 (Smarcc1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:mpah03021]     110327166 (Smarcc1)    03036 Chromosome and associated proteins [BR:mpah03036]     110327166 (Smarcc1) Transcription machinery [BR:mpah03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      110327166 (Smarcc1) Chromosome and associated proteins [BR:mpah03036]  Eukaryotic type   Chromatin remodeling factors    BAF complex     110327166 (Smarcc1)    PBAF complex     110327166 (Smarcc1)    GBAF(ncBAF) complex     110327166 (Smarcc1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SWIRM-assoc_2 SWIRM-assoc_3 SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6 HEAT_GCN1 DUF919 BRCT_2 SpeFL Motif Other DBs NCBI-GeneID:  110327166 NCBI-ProteinID:  XP_021061568 Ensembl:  MGP_PahariEiJ_G0015593 LinkDB All DBs Position 10:103527078..103621210 Genome browser AA seq 1106 aa AA seqDB search MAATAGGGPGAAAGAVGAGGAAAASGLAVYRRKDGGPASKFWESPDTVSQLDSVRVWLGK HYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCHI LGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLTRPNIYLIPDIDLKLA NKLKDIIKRHQGTFTDEKSKASHHIYPYPSSQEDEEWLRPVMRRDKQVLVHWGFYPDSYD TWIHSNDVDAEIEDAPIPEKPWKVHVKWILDTDIFNEWMNEEDYEVDENRKPVSFRQRIS TKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRSRSQKE EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEEAVTTGG KEDEDPSKGDPSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFG LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGSEEEK MEADPDGQQPEKAENKVENESDEGDKIQDRENEKNSEKEQDSDVSEDIKPEEKENEENKE LTDTCKERESDAGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ QQQQHGQTPQQAHQHTGGPGMAPLGATGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQMP GPGSMMPGQPMPGRMIPAVAANIHPTGSGPTPPGMPPMPGNILGPRVPLTAPNGMYPPPP QQQPPPPPADGVPPPPAPGPPASATP NT seq 3321 nt NT seq  +upstreamnt  +downstreamnt atggccgcgacagcgggtggcggtccgggagcagcagcaggcgccgtgggtgcagggggt gcggcggcggcctctgggctcgccgtgtaccggaggaaggacgggggcccggccagcaag ttttgggagagcccggacacggtgtcccagctagattcggtgcgagtctggctgggcaag cactacaagaagtatgttcatgcagatgctcctaccaataaaacactggctggactggtg gtgcagcttctacagttccaagaagatgcctttgggaagcatgtcaccaacccagctttc accaaactacctgcaaaatgtttcatggatttcaaagctggaggcaccttgtgtcacatt cttggggcagcttacaagtacaaaaatgaacagggctggcggagatttgatcttcagaac ccatcaagaatggatcgtaatgttgaaatgttcatgaacattgagaaaacattggtacag aacaactgtctgactagaccaaacatctacctcattccagacattgatttgaagttggct aacaagttgaaagatatcatcaaacggcatcaggggacatttactgatgagaagtcaaaa gcttcccaccacatttatccatatccttcctcacaagaggatgaggagtggctgaggcca gtgatgaggagagacaagcaggtgctggtgcactggggtttctacccagacagctatgac acttggatccacagtaatgatgttgatgctgaaattgaagatgccccaatcccagaaaag ccctggaaggttcatgtaaaatggattttggacactgacattttcaatgaatggatgaat gaagaggattatgaagtggatgagaacagaaaaccagtgagctttcgtcaacgaatttca acaaagaatgaagagccagtcagaagtccagaaaggagagatagaaaagcatctgccaat gctcgaaagaggaaacattccccttctcctcctcctcccacacccacagaatcccggaag aagagtgggaagaaaggacaagctagcctttatgggaaacgtagtagaagtcagaaagaa gaagatgagcaagaagatcttaccaaggacatggaagacccaacacctgtacctaatata gaggaagtggttctccctaagaatgtaaacccaaagaaggacagtgaaaacacacccgtt aaaggaggcacagtggcagatctagatgagcaggatgaagaagcagttacaacaggagga aaggaagatgaagatcccagcaaaggtgatccaagtcgctcagttgacccaggtgaagac aatgtgacagaacagaccaatcacatcattattcccagctatgcatcctggtttgattat aattgtattcatgtgattgaacggcgtgcacttccagaattctttaatggaaaaaacaaa tccaagacccctgagatatacttggcatatcgaaattttatgattgacacataccgtcta aaccctcaagaatatttaaccagcactgcttgtcggcgaaacctgactggagatgtgtgt gctgtgatgagggttcatgccttcttagagcaatggggtcttgttaactaccaagttgac ccagagagtcgacccatggcaatgggacctcctcccactcctcatttcaatgtgttagct gacacaccctctgggcttgtgcccctgcatcttcgatcaccgcaggtccctgctgctcaa cagatgttaaattttcctgagaagaacaaggaaaaaccaattgatttgcagaactttggt cttcgaactgacatttactccaagaaaacactggcaaagagtaaaggtgctagtgcggga agggagtggacagaacaggagacccttcttctcctagaggctctggagatgtacaaggat gattggaataaagtctcagaacatgttggaagtcgtactcaggacgaatgcatcctccac tttttgaggcttcccattgaggacccataccttgaaaattcagatgcttctcttgggcca ctagcttaccagcctgtccctttcagccagtcgggaaaccccgtcatgagtaccgttgcc tttttagcatctgttgttgaccctcgtgtagcatctgctgcagcaaaagcagctttggag gagttttctcgtgtccgagaagaagtacccctggaattggttgaagcccatgtcaagaaa gtacaggaagctgcaagagcctctgggaaggtggaccctacctatggcttggagagcagc tgtattgctggcacagggcctgacgagccagagaagcttgaaggatctgaagaagagaag atggaagcagatcctgatggtcagcagccggaaaaggcagaaaacaaagtggaaaatgaa tcggatgaaggcgataaaatacaagatcgagagaatgaaaaaaacagtgagaaggaacaa gatagtgacgtcagtgaagatatcaagccagaagaaaaggagaatgaagagaacaaagag ctcactgatacatgtaaagaaagagaaagcgatgccgggaagaagaaagtggaacacgag atttcagaaggaaatgttgccacagccgcagcagctgctctggcctcagctgctactaaa gccaagcacttggcggctgttgaagaaagaaagatcaagtccctggtggctctcttggtt gaaacacagatgaagaaactagagatcaaacttcgacattttgaagagctggagactatt atggacagagagaaagaggctctagaacaacagagacaacagttgcttactgagcgtcag aacttccacatggaacagttgaaatatgctgaactacgtgcccggcagcaaatggaacag cagcagcagcagcatggccagacacctcagcaggcgcaccagcacactggagggcctggg atggccccacttggagccacaggccaccctggcatgatgccacatcagcagccccctccc taccccctgatgcaccatcagatgccaccaccccaccctccccaaccaggtcaaatgcca ggccctggctccatgatgcctgggcagcccatgccaggtcgcatgatccccgctgtggca gccaacattcaccctactgggagtggtcctactcctcctggtatgcctccaatgcccgga aacatcttaggaccccgggtacccctgacagcaccaaatggcatgtatcctcctccacca cagcagcagccgccgcctccacctgcagatggggtccctccacctcctgctccaggccca ccagcctcggccactccctag

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