KEGG   Mus pahari (shrew mouse): 110327178
Entry
110327178         CDS       T05929                                 
Symbol
Wdr48
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    110327178 (Wdr48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mpah03400]
    110327178 (Wdr48)
DNA repair and recombination proteins [BR:mpah03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     110327178 (Wdr48)
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_EML EIF3I Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 WDR54 Beta-prop_IP5PC_F WD_LRWD1 WD40_RFWD3 Beta-prop_Vps41 RAWUL Nucleoporin_N WD40_like Tfb2_C HET-s_218-289
Other DBs
NCBI-GeneID: 110327178
NCBI-ProteinID: XP_021061594
Ensembl: MGP_PahariEiJ_G0015673
LinkDB
Position
10:112780078..112813533
AA seq 676 aa
MAAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDVVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLG
TIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLHRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPPPAVWVATTKSTVNKWTLKGMHNFRASGDYDNDCTNPITPLCTQPDQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKVDFEDEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGSDPKLNLGGLLLQALLEYWPRTHVT
PMDEEENEVNHVSGEQESRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETEAM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHASSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDNESQTTSSSNNEKPEQEKEEDIAVLAEEKIELLCQDQVLDPNMDLRTVKHFI
WKSGGDLTLHYRQKST
NT seq 2031 nt   +upstreamnt  +downstreamnt
atggcggcccatcaccggcagaacaccgccgggcggaggaaagtgcaggtttcttatgta
attcgagatgaagtggagaaatacaatcggaatggagtcaatgccctgcaactggaccca
gcactcaacagactcttcacagcaggtcgagactccatcataagaatatggagtgtcaat
cagcacaagcaagatccgtacatagcatcgatggagcaccacacagactgggtaaatgat
gtcgtgctctgttgcaatgggaaaacgctaatatctgcttcttcagacacaacagtaaaa
gtctggaatgcacataaagggttctgcatgtccacactcaggacgcataaggactatgta
aaggccttagcgtatgccaaggataaagagctggtagcatcagctgggctggacagacag
atattcctctgggatgtgaacactctgacagcactgactgcctcaaacaacaccgtcaca
acttcttctttaagtgggaacaaagactccatttatagcctggccatgaaccaactggga
acaatcattgtatcagggtccactgagaaggttctgagagtgtgggatccaagaacctgc
gcgaaactcatgaagctgaaaggacatacggacaatgtgaaggccctgctgctgcacagg
gacggcacacagtgcctctctgggagttctgatgggaccattcgcctgtggtcccttggc
cagcagagatgcatagcaacataccgagtccatgatgaaggtgtttgggccctacaggtc
aacgatgcctttacacatgtatattctggagggcgagacaggaaaatctactgcacagac
ctaaggaaccctgacattcgggtgctgatctgtgaggaaaaagcaccagttctcaagatg
gaacttgacagatcagcagatccccctcctgcagtctgggttgcaacaacaaagtccacg
gtaaataagtggacactgaagggaatgcataattttcgagcctctggtgattatgacaat
gattgtacaaaccccataacgcccctctgcacacagcccgaccaagttattaaagggggc
gctagtatcattcagtgccacatcctaaatgacaagcgacacatattaaccaaagatacg
aataacaacgtggcgtactgggacgtgttgaaggcatgcaaagtggaagatttgggcaaa
gtggactttgaagatgaaattaagaaaagatttaaaatggtgtatgttccaaattggttc
tcagtagacctaaaaacagggatgctgaccattactctggatgagagtgactgcttcgct
gcctgggtttcagccaaagatgctggcttcagcagtcctgatgggtcagacccaaaactg
aatttaggaggacttctactacaggcactgctggagtactggcctagaacacatgtgact
cccatggacgaagaagagaacgaagtgaaccatgtgagtggggaacaggagagcagagtc
cagaagggaaatggttatttccaagtgcccccacacacccctgtgatctttggagaagct
ggaggtcgcaccctattcaggctgctctgccgggactccgggggcgagaccgaggcgatg
cttctcaatgagacggtgccacaatgggtgattgacatcactgtggataaaaatatgccc
aaattcaacaaaattcctttctacctccaacctcatgcatcttcaggagcaaaaacttta
aaaaaagacaggctctctgccagtgacatgctgcaggtccggaaggtgatggaacatgtc
tatgagaagattatcaacctggataacgagtcccaaaccaccagctcttctaataatgaa
aagccagagcaggagaaggaggaggatatcgctgtgttggcagaggagaaaattgaactt
ctgtgccaggaccaggttttggacccaaatatggaccttcggacagtaaagcacttcata
tggaaaagtggtggggacctcaccctccattaccgtcagaagtccacgtga

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