Mus pahari (shrew mouse): 110327227
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Entry
110327227 CDS
T05929
Symbol
Ncam1
Name
(RefSeq) neural cell adhesion molecule 1 isoform X1
KO
K06491
neural cell adhesion molecule
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
mpah04514
Cell adhesion molecules
mpah05020
Prion disease
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
110327227 (Ncam1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110327227 (Ncam1)
09160 Human Diseases
09164 Neurodegenerative disease
05020 Prion disease
110327227 (Ncam1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110327227 (Ncam1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mpah04515
]
110327227 (Ncam1)
04090 CD molecules [BR:
mpah04090
]
110327227 (Ncam1)
00536 Glycosaminoglycan binding proteins [BR:
mpah00536
]
110327227 (Ncam1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
mpah00537
]
110327227 (Ncam1)
04091 Lectins [BR:
mpah04091
]
110327227 (Ncam1)
Membrane trafficking [BR:
mpah04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
110327227 (Ncam1)
Cell adhesion molecules [BR:
mpah04515
]
Immunoglobulin superfamily
NCAM1/2
110327227 (Ncam1)
CD molecules [BR:
mpah04090
]
Proteins
110327227 (Ncam1)
Glycosaminoglycan binding proteins [BR:
mpah00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
110327227 (Ncam1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
mpah00537
]
Others
110327227 (Ncam1)
Lectins [BR:
mpah04091
]
I-type lectins (Siglecs)
110327227 (Ncam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
C2-set_2
Ig_DSCAM-DSCAML_C
Ig_6
Ig_5
C1-set
Ig_C17orf99
C2-set_3
V-set_CD47
Adeno_E3_CR1
Ig_VEGFR-1-like_5th
Collagen_bind_2
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
110327227
NCBI-ProteinID:
XP_021061682
Ensembl:
MGP_PahariEiJ_G0015048
LinkDB
All DBs
Position
10:complement(44636408..44935494)
Genome browser
AA seq
1115 aa
AA seq
DB search
MLRTKDLIWTLFFLGTAVSLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGE
KLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMF
KNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIK
KTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGF
PEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDAS
IHLKVFAKPKITYVENQTAMELEEQVTLTCEASGDPIPSITWRTSTRNISSEEKTLDGHM
VVRSHARVSSLTLKSIQYTDAGEYICTASNTIGQDSQSMYLEVQYAPKLQGPVAVYTWEG
NQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNC
TAVNRIGQESLEFILVQADTPSSPSIDRVEPYSSTAQVQFDEPEATGGVPILKYKAEWKS
LGEESWHFKWYDAKEANMEGIVTIMGLKPETRYSVRLAALNGKGLGEISAATEFKTQPVR
EPSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVKYRALASEWKPEIRLPSGSDHVM
LKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTSAQPTAIPANGSPTAGLSTGAIVGILIV
IFVLLLVVMDITCYFLNKCGLLMCIAVNLCGKAGPGAKGKDMEEGKAAFSKDESKEPIVE
VRTEEERTPNHDGGKHTEPNETTPLTEPELPADTTATVEDMLPSVTTVTTNSDTITETFA
TAQNSPTSETTTLTSSIAPPATTGPDSNSVPAGQATPSKGVTASSSSPASAPKVAPLVDL
SDTPTSAPSASNLSSTVLANQGAVLSPSSPANAGETSKAPPTSKASPTPTPTPAGAASPL
AAVAAPATEAPQAKQEAPSTKGPDPEPTQPGTVKNPPEAATAPASPKSKAATTNPSQGED
LKMDEGNFKTPDIDLAKDVFAALGSPAPATGASGQASELAPSTADSAVPPAPAKTEKGPV
ETKSEPPESEAKPAPTEVKTVPNDATQTKENESKA
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgaactaaggatctcatctggactttgtttttcctgggaactgcagtttccctg
caggtagatattgttcccagccaaggagaaatcagcgttggagagtccaaattcttcctg
tgtcaagtggcaggagatgccaaagataaggacatctcctggttctcgcccaatggggag
aagctgagcccaaaccagcagcggatctcagtggtgtggaatgatgacgactcctctacc
ctcaccatctacaacgccaacatcgacgatgccggcatttacaagtgtgtggtcactgct
gaggatggcacccagtccgaggccactgtcaacgtgaagatctttcagaagctcatgttc
aagaatgcaccaaccccacaggagtttaaggaaggagaggatgctgtgattgtctgtgat
gtcgtcagctccctgcccccaaccatcatctggaaacacaaaggccgagatgtcattctg
aaaaaagacgtccggttcatagtcctgtccaacaactacctgcagatccggggcatcaag
aaaacagatgagggcacttaccgctgtgagggcaggatcctggcccgaggggaaatcaac
ttcaaggacattcaggtcattgtgaatgtaccacccactgtccaggccagacagagcatc
gtgaatgccactgccaacctgggccagtctgtcaccctggtgtgtgatgccgatggcttc
ccagagcccaccatgagctggacaaaggatggggaacccatagagaatgaggaggaagat
gacgagaagcacatcttcagtgatgacagctctgagctgaccatcaggaatgtggacaaa
aatgacgaggctgaatacgtctgcatcgcggagaacaaggctggcgagcaggatgcctcc
atccacctcaaggtctttgcaaagcccaaaatcacctatgtagagaatcagacagccatg
gaactagaggagcaagtcactctgacctgtgaagcctccggagaccccatcccctccatc
acctggagaacatccacccggaacatcagcagtgaagaaaagacgctggatgggcacatg
gtggtacgcagccatgcccgtgtgtcctccctgaccctaaagagtatccagtacacagat
gctggcgaatacatctgcactgccagcaacaccatcggccaggactcccagtccatgtac
ctcgaggttcaatatgctcccaagctccagggccccgtggctgtgtacacttgggaaggg
aatcaggtgaacatcacctgtgaggtcttcgcctacccaagtgccaccatctcctggttc
cgagatggtcagttgctgccgagctccaactacagcaatatcaagatctacaacacccca
tccgctagctatctggaggtgacccctgattcagaaaatgactttggaaactacaactgt
acagcagtgaaccgtattggacaggagtccttggaattcatccttgttcaagcagacaca
ccgtcttctccatccatcgaccgggtggaaccatactccagcacggcgcaggtgcagttt
gatgagccagaggccacgggtggagtgcccatcctcaagtacaaggctgagtggaagtca
ctgggcgaagagtcatggcatttcaagtggtatgatgccaaagaagccaacatggaaggc
attgtcaccatcatgggcctgaaacctgagacgaggtactcggtacgactggcggccctc
aacggcaaggggctgggcgagatcagtgcggccactgagttcaagacacagccagtccgg
gaacccagtgcacccaagctggaagggcagatgggagaggacgggaactccatcaaggtg
aacctgatcaagcaggatgacggaggctcccccatcagacactatctggtcaagtacaga
gcgcttgcctctgagtggaaaccggaaatcaggctcccatccggcagtgaccacgtcatg
ctcaagtccctggactggaatgcggagtatgaagtctatgtggtagctgagaaccagcaa
ggaaaatccaaggcagctcattttgtgttcaggacctcagcccagcccacggccatccca
gccaatggcagccccaccgcaggcctgagcacgggcgccattgtgggcatcctcattgtc
atcttcgtcctgctcctggtggtcatggacatcacctgctacttcctgaacaagtgtggc
ctgctcatgtgcatcgctgtgaacctgtgcggcaaagctgggcctggagccaagggcaaa
gatatggaggagggcaaggctgctttctcgaaagatgagtctaaagaacccattgtggag
gtccgaacagaggaagaacggactccaaaccatgatggggggaagcacacggagcccaat
gagaccacgccgctgacagagcccgagctgcctgccgacaccacagccactgtcgaggac
atgctgccttctgtcaccaccgtcaccactaactctgacactatcaccgaaacctttgcc
actgctcagaacagccctaccagtgagaccactacactgacctccagtattgccccaccg
gccacaactgggccagactcaaattctgtgcccgctggtcaggccaccccttccaagggt
gtcactgcttcatcctcgtccccagcctcagccccaaaagttgctcctcttgttgatctg
agtgataccccaacctcagctccctctgctagcaatctgtcctccacggtcttggctaac
caaggagccgtactcagtcctagcagccctgccaatgcgggagagacctccaaagcccct
ccaaccagtaaggcctctcccactcccaccccaactccagctggggcagccagcccctta
gcagcagtagccgcccctgccacagaagccccccaggccaagcaggaagcccccagcacc
aaaggtccggacccagagcccacccagcctggcaccgtgaagaacccaccagaggcagcc
acagcccctgctagcccgaagagcaaggctgcaaccacaaacccttcccagggcgaggac
ttaaaaatggacgaagggaacttcaagaccccagatattgaccttgcaaaggatgttttt
gcagccctgggctctcctgctcctgccactggggccagtggacaagcctctgagcttgct
ccttccactgcagacagcgctgtgcctcccgcaccagcaaagaccgagaaaggccctgta
gaaacaaagtctgagccccctgagtcagaagccaagccagcgccaactgaagtcaagacg
gtccccaacgacgccacacaaacaaaagagaatgagagcaaagcatga
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integrated database retrieval system
