Mus pahari (shrew mouse): 110327294
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Entry
110327294 CDS
T05929
Symbol
Ubp1
Name
(RefSeq) upstream-binding protein 1 isoform X1
KO
K09275
transcription factor CP2 and related proteins
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110327294 (Ubp1)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Grainyhead
110327294 (Ubp1)
BRITE hierarchy
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GFIT
Motif
Pfam:
CP2
SAM_3
SAM_1
SAM_PNT
SAM_2
Motif
Other DBs
NCBI-GeneID:
110327294
NCBI-ProteinID:
XP_021061799
Ensembl:
MGP_PahariEiJ_G0015631
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All DBs
Position
10:107195737..107238018
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AA seq
540 aa
AA seq
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MAWVLSMDEVIESGLVHDFDSSLSGIGQELGAGAYSMSDVLALPIFKQEDSSLSLEDEAK
HPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEISGKLVKSIIRVV
FHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRT
SAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGA
DRKQKNDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKKSSKRTLPADY
GDSLAKRGSCSPWPDTPTAYVNNSPSPAPTFTSSQPSTCSVPDSNSSSPNHQGDGVAQAS
GEQIQPSATTQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNS
LKSRSVRPRLTIYVCQEQPSSTALQGQPQAAGSGGESGGGTPCVYHAIYLEEMVASEVAR
KLASVFNIPFHQINQVYRQGPTGIHILVSDQMVQNFQDETCFLFSTVKAENNDGIHIILK
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcctgggtgctcagtatggacgaggtgatcgagtccgggctggtgcacgacttcgac
tccagcctgtccggcatcgggcaggagctgggcgccggcgcctacagcatgagtgatgtg
ttggcattgcccattttcaagcaagaagattccagcctttccttggaagatgaggccaag
cacccccccttccaatatgtaatgtgtgctgcaacttcgccagccgttaaactgcacgat
gagacacttacttacttgaaccaaggccagtcttatgaaattcggatgctggataatcgc
aaaatgggagatatgcctgagatcagtgggaagttggtaaagagcatcataagggtggtg
ttccatgacaggcggctacagtacacagaacatcagcagcttgaaggctggaagtggaat
cgtccaggagacaggcttctcgatttagatattccaatgtcggtgggaataattgacaca
aggacaaatccaagccagttaaatgcagttgaatttctgtgggaccctgcaaagcgcaca
tctgccttcattcaggtacactgtatcagcacagaattcaccccacgtaagcatggaggt
gaaaaaggagtgcctttcaggatccaggttgacacctttaagcagaatgaaaacggggaa
tacacagatcatcttcactcagctagctgccaaatcaaagtctttaagcctaaaggtgcg
gacaggaaacaaaaaaatgaccgagaaaagatggagaagagaacagctcatgaaaaagaa
aagtatcaaccgtcttacgacaccaccattctcacagagatgaggcttgagcctataatt
gaagatgcagttgaacatgagcagaaaaagtccagcaagcggactttgccagcagactac
ggtgattctctggcaaagcgaggcagttgttctccatggcccgacacccctacagcctat
gtgaataacagcccttccccagcgcccactttcacctcctctcagccgagcacgtgcagt
gtcccagacagcaattcttcatccccaaatcaccagggagatggagttgcacaagcctct
ggggaacaaattcagccttcagctacaacccaggaaacacagcagtggctgctaaaaaac
aggttctcttcctatacaagactgttctctaatttttcaggtgccgacttattaaagctg
acaaaggaggatttagttcagatttgtggtgcagccgatggaattcggctctataattcc
ctgaagtcaaggtcggttaggccccgcttaaccatctatgtctgccaggagcagccgagt
agcactgcgctgcaagggcagccacaagctgcaggcagtggaggtgaaagtggcggtggg
acaccctgcgtttatcatgcaatctacttggaagaaatggttgcctcagaagttgctcga
aaacttgcctcggtttttaatattcctttccaccaaattaaccaggtttacagacagggc
cccactggtatccacattcttgttagtgaccagatggttcagaactttcaagatgagact
tgttttttattctccacagtaaaagctgaaaataatgatggtattcacataattttgaag
taa
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