Mus pahari (shrew mouse): 110327439
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Entry
110327439 CDS
T05929
Symbol
Arhgef12
Name
(RefSeq) rho guanine nucleotide exchange factor 12
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04270
Vascular smooth muscle contraction
mpah04360
Axon guidance
mpah04611
Platelet activation
mpah04625
C-type lectin receptor signaling pathway
mpah04810
Regulation of actin cytoskeleton
mpah05135
Yersinia infection
mpah05152
Tuberculosis
mpah05163
Human cytomegalovirus infection
mpah05200
Pathways in cancer
mpah05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
110327439 (Arhgef12)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
110327439 (Arhgef12)
04625 C-type lectin receptor signaling pathway
110327439 (Arhgef12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
110327439 (Arhgef12)
09158 Development and regeneration
04360 Axon guidance
110327439 (Arhgef12)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110327439 (Arhgef12)
05205 Proteoglycans in cancer
110327439 (Arhgef12)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
110327439 (Arhgef12)
09171 Infectious disease: bacterial
05135 Yersinia infection
110327439 (Arhgef12)
05152 Tuberculosis
110327439 (Arhgef12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110327439 (Arhgef12)
Membrane trafficking [BR:
mpah04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
110327439 (Arhgef12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
PH_13
SOS1_NGEF_PH
Pept_S41_N_bact
AAA_23
Ribonuc_2-5A
Motif
Other DBs
NCBI-GeneID:
110327439
NCBI-ProteinID:
XP_021062084
Ensembl:
MGP_PahariEiJ_G0014956
LinkDB
All DBs
Position
10:complement(38079807..38213827)
Genome browser
AA seq
1536 aa
AA seq
DB search
MSGTQSTITDRFPLKKPIRHGSILNRESPTDKKQKVERSSSHDFDPTDSSSKKTKSSSEE
SRSEIYGLVQRCVIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGT
LVTHSNHLEVVKLIRSGSYVALTVQGRPPGSPQIPLADSEVEPSVTGHMSPIMTSPHSPG
AAGNMERITSPVLMGEENNVVHNQKVEILRKMLQKEQERLQLLQEDYNRTATQRLLKEIQ
EAKKHIPQLQEQLSKATGSAQDGAVIAPSRPLGDALTLSEAETDPGDGLCRTDWSSGDAS
RPSSDSADSPKSSLKERSYLEEAPERSEGVQDAETQSLVGSPSTRGAPHIIGAEDDDFGT
EHEQINGQCSCFQSIELLKARPAHLAVFLHHVVSQFDPATLLCYLYSDLYKQTNSKETRR
VFLEFHQFFLDRSAHLKVPVPEEISMDLEKRRPELIPEDLHRHYIQTMQERVHPEVQKHL
EDFRQKRSMGLTLAESELTKLDAERDKDRGTLEKERACAEQIVTKIEEVLMTAQAVEEER
SSTMQYVILMYMKYLGVKVKEPRNLEHKRGRIGFLPKIKQSMKKDREGEEKGKRRGFPSI
LGPPRRPSRHDNSAIGRAMEIQKLRHPKHSSAPLSVSPEPQDPAKLRQSGVANEGTDTGY
LPASSMSSATSGAALSQEGGRENDTGTKQVGEASAPGDCLDSTPRVPNTVFDFPPPLLDQ
VQEEECEVERVAEHGTPKPFRKFDSIAFGESQSEDEQFENDLETDPPNWQQLVSREVLLG
LKPSEIKRQEVINELFCTERAHVRTLKVLDQVFYQRVSREGILSPSELRKIFSNLEDILQ
LHVGLNEQMKAVRKRNETSVIDHIGEDLLIWFSGPGEEKLKHAAATFCSNQPFALEMIKS
RQKKDSRFHTFVQDAESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWPPEREKV
KKAADHCRQILNYVNQAVREAENKQRLEDYQRRLDTSNLKLSEYPNVDELRNLDLTKRKM
IHEGPLVWKVNRDKSIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVI
KLSTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQSTK
AIPLPQPPPCEGDNDEEEPAKLKVEHHDLSVAGLQSPDRVLGLESPLISSKPQSHSLNTP
GKSEAEHLFVTATQFAKEQHANGTLKEGDGGYPVTIPGPHLPVSEERWALDALRNLGLLK
QLLVQQLGLTEKSTREDWQSLSRYGPASEEVQADSGIQDLENVKACHAGEGQMSFKTGTG
DIATCDSPRTSTESCAAQDSVILASQDSQASNILVMDHMILTPEMPTAEPEGGLDESGEH
FFDAREAHSDDIPSEGDGAVKKEEKDVNLRISGNCLILDGYDAVQESSTDEEFAASFPLA
VDPSHQQQRSPQNAHPEGPVSPFTPEFLVQRHWRAMEDTCFEIQSPFCTDSQSQILEYIH
KIEADLEHLKKVEESYALLCQRLAGSALPDKLSDKS
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtctactatcacggacaggtttcccctcaaaaaacctataaggcat
ggaagtattttgaaccgagagtcaccaacagataagaaacaaaaagtcgaacgcagttca
tcacatgattttgaccccacagatagctcctccaagaagacaaagtctagttcagaggag
agtagatccgagatctatggtcttgttcagcgctgtgtgatcatccagaaagatgacaat
ggattcgggctgacagtcagtggagacaatccggtcttcgtacaatctgtcaaagaagat
ggagcagccatgcgtgctggggtacaaacaggtgatcgaatcatcaaggtgaatggcact
ctggtgactcattcaaaccatctggaggtggtgaaactaatcagatctggttcctatgta
gctctcactgtccagggacgcccacctgggtcgccccagatcccacttgctgattctgaa
gtagagccatcagtcactggacatatgtctcccattatgacatcccctcattcccctgga
gcagccgggaatatggagaggatcaccagtcctgtgctcatgggggaggaaaacaatgtg
gtccataaccagaaagtagagattctgagaaaaatgttacagaaggaacaggaacggctg
cagttgctgcaggaagattacaaccgaacggctacccaaagattgctcaaggagatccag
gaggccaagaagcacatcccgcagctgcaggagcagctgtccaaagccacaggctctgct
caggacggagctgtgattgcaccatccaggccattaggtgatgccctaacactcagcgag
gcagaaacagatcctggagatggcctgtgcaggactgactggagcagtggagatgcttct
cggcccagtagtgacagtgctgatagtcccaagagcagcctgaaagaaaggagttatcta
gaggaagccccagagagaagtgaaggagttcaggacgctgagacacagtcgctggttggc
agtccctccacccggggcgcccctcacattattggagcagaggatgatgactttggtact
gagcatgagcagatcaatggacagtgcagctgtttccagagcattgaactgctgaaggct
cgccctgctcacttggccgttttcttacaccatgtagtctcacagtttgaccctgcaaca
ttgctctgttatctctattcagacctgtataagcagacgaactccaaggagactcggcgt
gtcttcctggagtttcatcagttcttcttggaccggtctgcacacctgaaagttccagtt
cctgaggaaatctccatggatctagaaaagagaagacctgagcttattcctgaggatctg
catcgccactacattcaaacaatgcaggagagagtccaccctgaagttcagaagcacttg
gaggattttcgacagaaacgcagcatggggctgaccttggctgagagtgagctgactaaa
cttgatgcagagagagacaaggaccggggaactctggagaaggagcgagcatgtgcggaa
cagatcgttaccaaaattgaagaagtgttgatgactgctcaggctgtagaagaagaaagg
agttccacaatgcagtacgtaattctcatgtatatgaagtatttgggagtaaaagtgaaa
gaaccgcgaaacttggagcacaagcggggtcggatcggcttccttccaaagatcaagcaa
agcatgaagaaagatagagagggcgaagaaaaagggaagcgaagaggattccccagcatt
ttgggacccccaagaagaccaagccgccacgacaacagtgcaattggcagggccatggag
atacagaagttacgccacccgaagcactcatctgcacccttgtctgtgagtcctgagcct
caggaccctgccaagttgcgccagagtggagtagccaacgaaggaacagacactggatac
ctgcccgccagttccatgtcctctgccacctcaggggctgctctttcccaagagggaggg
agagagaatgatacaggaacaaaacaagtgggagaagcatcggcccctggagactgcttg
gacagcacacctcgtgtccccaatactgttttcgacttccctcctcctctgttagatcaa
gtgcaagaggaggaatgtgaagtggagagggtggcagaacatggaaccccaaaacccttt
cggaagtttgacagcatcgcctttggagaaagtcaaagtgaggatgagcagtttgaaaat
gacctggagacagatccgcccaactggcagcagcttgttagcagagaagtgttactggga
ctgaaaccttctgagatcaaaagacaggaagtgatcaatgagttgttctgcactgagcga
gctcacgtgcggacactgaaggtccttgaccaagtgttctatcagcgagtgtccagagag
gggattctctcaccttcagaactgcgcaagattttttcaaacttggaagatatccttcaa
cttcatgttgggttgaatgagcaaatgaaagctgtccgaaaaaggaatgagacttctgtt
attgatcatattggggaagatctgctcatctggtttagtggaccaggagaggagaagctg
aaacacgctgccgccacattctgcagtaaccagcctttcgccctggaaatgatcaagtct
cgccagaaaaaggattctcgattccatacttttgtgcaagatgctgagagtaatcccctg
tgccgtcgtcttcagctgaaggacatcattcccacccaaatgcagaggctcactaagtac
ccgcttcttttggataacattgccaagtacacagaatggcctccagaaagggaaaaggtg
aagaaggctgcagatcattgtcgtcagatcttaaattacgtaaatcaggctgtcagggag
gcagaaaacaagcagcgcttagaagactatcagcgtcgccttgacacctccaatctcaag
ttgtccgagtacccaaatgttgacgagctcaggaatttggatttaacaaaaagaaagatg
attcacgaagggccgttggtctggaaggtgaatagagataaaagcatcgatctttataca
ctgctgctggaagacattcttgtgctgctccaaaagcaggatgacaggctggtgctaagg
tgccacagcaagatcctggcatccacagctgacagcaaacacaccttcagccctgtcatt
aagctgagcacagtactggttcggcaggtggcaacagataacaaagctttattcgtcatc
tccatgtcagataatggagcccaaatttatgaattggtagcacagacggtttctgaaaag
acagtctggcaagacctcatctgtcgaatggctgcgtcagtgaaggagcagtctacaaag
gcgattcccctcccacagcctccaccttgcgaaggagacaatgatgaggaagagccagcc
aagttaaaagtggagcaccatgatctttcagtcgctggtctgcaaagtccagacagagtt
ttgggattagaatctcccttaatttcgtcaaaacctcagtctcattcactgaatacccct
ggcaaatcagaggcagaacatctctttgtgaccgcaacacagtttgcaaaggaacagcat
gcaaatgggacactcaaggaaggtgatggcgggtatccagtcacaatcccaggaccacac
ttgcctgtgtcagaggagcggtgggcattggacgcactgagaaatttgggcttgttgaag
cagttgctggtacagcagttaggtctcaccgagaagagcactcgggaagactggcagtcc
ttatcaagatacgggccagcttctgaagaggtacaggcagacagtggcatccaggacttg
gaaaatgtcaaggcttgtcatgccggggaaggacagatgtcttttaaaactggaactggt
gatattgcaacttgtgacagtccacggacttcaactgagtcttgtgctgcacaggattca
gtgatactggcatcccaagacagccaggcaagtaacattttagtaatggaccacatgatc
ctgaccccagagatgcctactgcagagccagaagggggtctggatgagagtggagagcac
ttttttgatgcccgtgaagcacatagtgatgatattccatcagaaggtgatggagcagtt
aaaaaggaagagaaggatgttaatttacgcatctcaggaaactgtttgatccttgatggc
tacgacgcagtgcaggagagctccacagatgaggagtttgccgcctccttccccctagct
gtggaccccagccaccagcagcaacgttcccctcagaatgcacatcccgaggggccggtt
tcaccattcaccccagaattcctggtccagcggcactggcgagctatggaggatacctgt
tttgagatccagagtcccttttgtacagattcacaaagccaaatcctggagtacattcat
aaaatagaggctgacctggaacacttaaagaaggtggaggaaagttacgctcttctttgc
caaaggctggctggctcagccctccccgacaagctctcagataaaagttag
DBGET
integrated database retrieval system
