Mus pahari (shrew mouse): 110327455
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Entry
110327455 CDS
T05929
Symbol
Trpc1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04360
Axon guidance
mpah04724
Glutamatergic synapse
mpah04726
Serotonergic synapse
mpah04929
GnRH secretion
mpah04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
110327455 (Trpc1)
09154 Digestive system
04972 Pancreatic secretion
110327455 (Trpc1)
09156 Nervous system
04724 Glutamatergic synapse
110327455 (Trpc1)
04726 Serotonergic synapse
110327455 (Trpc1)
09158 Development and regeneration
04360 Axon guidance
110327455 (Trpc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mpah04040
]
110327455 (Trpc1)
Ion channels [BR:
mpah04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
110327455 (Trpc1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
110327455
NCBI-ProteinID:
XP_021062115
Ensembl:
MGP_PahariEiJ_G0015401
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Position
10:complement(89154386..89200380)
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AA seq
809 aa
AA seq
DB search
MGAPPPSPGLPPSWAAMMAALYPSTDLSGVSSSSLPSSPSSSSPNEVMALKDVREVKEEN
TLNEKLFLLACDKGDYYMVKKILEENSSGDLNINCVDVLGRNAVTITIENESLDILQLLL
DYGCQSADALLVAIDSEVVGAVDILLNHRPKRSSRPTIVKLMERIQNPEYSTTMDVAPVI
LAAHRNNYEILTMLLKQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPA
LIMLTEEDPILRAFELSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEV
ILNHTSSDEPLDKRGLLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRR
KPTCKKIMTVLTVGIFWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLY
SLVYNEDKKNTMGPALERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNS
LYLATFALKVVAHNKFHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILG
PLQISMGQMLQDFGKFLGMFLLVLFSFTIGLTQLYDKGYTSKEQKDCVGIFCEQQSNDTF
HSFIGTCFALFWYIFSLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAM
LHKSFQLIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWICS
HTSKGKVKRQNSLKEWRNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENLNEL
RQDLSKFRNEIRDLLGFRTSKYAMFYPRN
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgggggccccgcctccgtctcctggcctgcccccgtcgtgggctgcgatgatggcggcc
ctgtacccgagcaccgacctctcgggcgtctcctcctcctccctgccttcctccccatcc
tcctcatcgcccaacgaagtgatggcgctgaaggatgtgcgagaggtgaaggaggagaac
accttgaatgagaagcttttcttgctggcgtgcgacaagggtgactattatatggttaaa
aagattttggaggaaaacagttcaggtgacttgaacataaattgcgtagatgtgcttggg
agaaatgctgttaccataactattgaaaacgaaagcttggacatactgcagctgcttttg
gactacggttgtcagtccgcagatgcacttttggtggcaatcgactctgaagtagtggga
gctgttgatatactacttaatcatcggccaaaacgatcatcaagaccaaccattgtaaaa
cttatggaacgaattcagaatccggaatattcaacaacgatggatgttgcacctgttatt
ttagctgctcatcgtaacaactatgaaattcttacaatgcttttaaagcaggatgtgtct
ttgcccaagccccatgctgttggctgtgaatgcacactgtgttctgcaaaaaacaaaaag
gacagcctcagacattccaggtttcgtcttgatatctatagatgtctggccagcccagct
ctgataatgttaacagaggaggatccaatcctgcgagcgtttgaacttagtgctgactta
aaggaactcagcctcgtggaggtggaattcaggaatgattatgaagagctagcccgtcag
tgcaaaatgtttgctaaagatttgcttgcacaagcccggaattctcgtgaactggaagtt
atcttgaaccatacatctagtgatgagcctcttgacaaacgagggctactagaagaaaga
atgaatttaagtcgtctgaaacttgctatcaaatataaccagaaggagtttgtctcccag
tcaaattgccaacagttcctgaacaccgtttggtttggacagatgtcaggttaccgccga
aagcccacctgtaagaagataatgactgttttgacagttggcatcttctggccagttttg
tcactatgctatttgatagctcccaaatctcaatttggcagaatcattcacacacctttc
atgaaattcattattcatggagcatcgtatttcacattcttgctgttgctaaatctctac
tcacttgtctacaatgaggacaagaaaaatacaatggggccagccctagagagaatagat
taccttctcatactgtggattattgggatgatctggtcagacattaagagactgtggtat
gaagggctggaagactttctggaagaatctcgtaaccagctcagctttgttatgaattcc
ctttacttggcaacctttgccctcaaagtggtggctcacaacaagtttcatgactttgct
gaccggaaggactgggacgcattccaccccacgcttgtagcagaagggctttttgctttt
gcaaatgttctgagttaccttcgactcttttttatgtatacaaccagctctattttgggc
ccactgcagatttcaatgggacagatgttacaagattttgggaaatttctgggaatgttt
ctccttgttctgttttccttcacgattggactgactcagctctatgacaaaggctacact
tccaaagagcagaaggactgtgtgggcatcttctgcgaacagcaaagcaatgacaccttc
cactcgttcattggcacctgctttgctctgttctggtacatcttctccttagcgcacgtg
gccatctttgtcaccaggtttagctatggggaagagctgcagtccttcgttggagctgtg
attgttggaacttacaatgttgtggttgtgattgtgcttacgaagctgctggtggcgatg
cttcacaagagctttcagctgatagcaaatcatgaggataaagaatggaagtttgctcga
gcaaagctatggcttagctactttgatgacaaatgtacactgcccccacctttcaacatt
attccttctccaaagacgatctgctatatgatcagtagcctcagtaagtggatttgctcg
catacctcgaaaggcaaggtcaaacgtcaaaacagtttaaaggagtggagaaacttgaag
caaaagagagatgagaactaccagaaggtgatgtgctgcctggtgcaccgatacctgacg
tctatgcgacaaaagatgcagagcacagaccaggccaccgtggagaacctcaatgaactg
cgccaagatctgtcaaaattccgaaatgaaataagggatttacttggctttcggacttct
aaatatgctatgttttatccaagaaattaa
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