Mus pahari (shrew mouse): 110327509
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Entry
110327509 CDS
T05929
Symbol
Dscaml1
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mpah04515
]
110327509 (Dscaml1)
Cell adhesion molecules [BR:
mpah04515
]
Immunoglobulin superfamily
DSCAM family
110327509 (Dscaml1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
Receptor_2B4
V-set_CD47
Interfer-bind
fn3_2
ChitinaseA_N
SseB
Motif
Other DBs
NCBI-GeneID:
110327509
NCBI-ProteinID:
XP_021062234
Ensembl:
MGP_PahariEiJ_G0015016
LinkDB
All DBs
Position
10:40569323..40890349
Genome browser
AA seq
2111 aa
AA seq
DB search
MTGAGEPRREEPPPCAGLRSRESGAPSAGGWERAERGRGAAARPATGPPPRRIGPLYGMW
LVTFLLLLDSLHKARPEDVGTSLYFVNDSLQHVTFSSSVGVVVPCPAAGSPSAALRWYLA
TGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENAAGKIRSPNIRIKAV
FREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSITPENRFFITSHGGL
YISDVQKEDALSTYRCITQHKYSGETRQSNGARLSVTDPAESIPTILDGFHSQEVWTGHA
VELPCAASGYPIPAIRWLKDGRPLPADSRWAKRITGLTISDLRTEDSGTYICEVTNTFGS
AEANGILTVIDPLHVTLTPKKLKTGIGSTVILSCALTGSPEFTIRWYRNTELVLPGEAIS
IRGLSNETLLISSAQKSHSGAYQCFATRKAQTAQDFAIIVLEDGTPRIVSSFSEKVVNPG
EQFSLMCAAKGAPPPTVTWALDDEPVVRDGSHRTNQYTMSDGTTISHMNVTGPQIRDGGV
YRCTARNSVGSAEYQARINVRGPPSIRAMRNITAVAGRDTLINCRVIGYPYYSIKWYKDA
LLLPDNHRQVVFENGTLKLTDVQKGMDEGEYLCSVLIQPQLSISQSVHVAVKVPPLIQPF
EFPPASIGQLLYIPCVVSSGDMPIRITWRKDGQVIISGSGVTIESKEFMSSLQISSVSLK
HNGNYTCIASNAAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVM
WKHAKGSGNPQQYHPVPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKAMF
LTVKIPAMITSHPNTTIAIKGHAKELNCTARGERPIIIRWEKGDTVIDPDRVMRYAIATK
DNGDEVVSTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKARS
MNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIRM
YSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGY
QIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEIN
ATTLEDVPSQPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWGEM
QNVTTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDVPGPPAGIKAVPS
SASSVVVSWLPPTKPNGVIRKYTIFCSSPGSGQPAPSEYESSPEQLFYRIAHLNRGQQYL
LWVAAVTSAGRGNSSEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGDPAPAVK
WTKDSEDSAIPVSLDGHRLIHTNGTLLLRAVKAEDSGYYTCTATNTGGFDTIIVNLLVQV
PPDQPRLTVSKTSASSITLTWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFKL
DSLKCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQG
WNNGGCPITAIVLEYRPKGTWAWQGVRANSSTDVFLTELREATWYELRMRACNSAGCGNE
TAQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIGCPVILATLGVALLFVVRKKRKEKRLK
RLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKATI
PVTDAEFSQAVNPQSFCTGVSLHHPALIQSTGPLIDMSDIRPGTNPVSRKNVKSAHSTRN
RYSSQWTLTKCQASTPARTLTSDWRTVGSQHGVTVTESDSYSASLSQDTDKGRNSMVSTE
SASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTNENADSMTSMSTPS
EPGICRFTASPPKPQDADRGKNVAVPIPHRANKSDYCNLPLYTKSEAFFRKADGREPCPV
VPPREASMRNLTRAYHTQARHLTLDPASKPLGLPHSGATAATATATLPQRTLAMPAPPAG
TAPPAPGPTPSEPSAAPSAAPPAPSTEPPRAGGPHTKMGGSRDSLLEMSTPGVGRSQKQG
AGAYSKSYTLV
NT seq
6336 nt
NT seq
+upstream
nt +downstream
nt
atgacaggagccggggagccgaggagggaggagccgccgccgtgcgctgggctgaggagc
agagagagcggggcgccgagtgcgggcggctgggagcgcgctgagcgggggagaggcgct
gccgcacggccggccacaggaccacctccccggagaatagggcctctttatggcatgtgg
ctggtaactttcctcctgctcctggactctttacacaaagcccgccccgaggatgttggc
accagcctctactttgtaaatgactccctgcagcacgtgaccttctccagctctgtgggt
gtggtggtgccctgcccggcagctggatcccccagtgcggctctccgatggtacctggcc
acgggggacgacatctacgatgtgccgcacatccggcacgtgcatgccaatgggactctg
cagctctaccctttctccccctccgccttcaatagctttatccacgacaatgactatttc
tgcaccgcagagaacgcagccggcaagatccggagccctaacattcgcatcaaagcagtt
ttcagggaaccctacaccgtccgggtggaggatcaaaggtcaatgcgtggcaacgtggct
gtctttaagtgcctcatcccctcttcagtgcaggaatacgttagcgtcgtgtcttgggag
aaagacacggtctccatcactccagaaaacaggtttttcatcacatcacatggtggactg
tacatctcggacgtgcagaaggaagacgctctctctacctaccgctgcatcactcagcac
aaatacagtggggagacccgtcagagcaacggggctcggctctctgtgacagaccctgca
gagtccattcccaccatcctggatggcttccactcccaggaagtgtggactggccacgcg
gtagagctgccctgtgctgcctccggctaccccatccctgccatccgctggctcaaagat
ggcagacccctccctgctgacagccgctgggctaagcgcattacagggctgaccatcagt
gacctgcgcacggaggacagcggcacctacatctgtgaggtcaccaacacctttgggtca
gcagaggccaatggcatcctcacagtcatcgaccctcttcatgtgaccctgacaccaaag
aagctgaagacaggcatcgggagcacggtcatcctgtcctgcgccctcacgggctccccg
gagttcaccatccgctggtaccgcaacacagaactggtgctgccgggtgaggccatctcc
atccgcgggctcagcaatgagaccctgctcatctcctcggcacagaagagccactcggga
gcctaccagtgcttcgccacccgcaaggcccagacagcccaggactttgccatcattgtg
ctggaagacggcacgccccgcatcgtctcatccttcagcgagaaggtggtcaacccgggg
gagcagttctcactgatgtgtgccgccaagggcgccccgccccccacggtcacctgggcc
ctggacgacgagcccgtcgtgcgggacggaagccaccgcaccaaccagtacaccatgtcc
gacggcaccaccatcagccacatgaacgtcacgggtccccagatccgggatgggggcgtg
taccggtgcacagcgcggaactcggtgggcagtgctgaatatcaggcgcgaataaacgta
agaggaccccccagcattcgggcaatgaggaacatcacggcagtcgccgggcgggacaca
ctcatcaactgcagggttattggctacccctactactccatcaagtggtacaaggatgcc
ctgctgctacccgataaccaccgccaggtggtgtttgagaatgggactctcaagctgaca
gatgtgcagaagggcatggatgagggggagtacctgtgcagtgttctcatccagccacag
ctttccatcagccagagtgtccacgtggccgtcaaagtcccccctctgatccagcccttc
gagttcccccctgcctccatcggccagctgctttacatcccctgtgtggtgtcctcgggg
gacatgcccatccgcatcacctggaggaaggacgggcaggtgatcatctcaggctcgggt
gtgaccatcgagagcaaggagttcatgagttccctccagatctccagtgtctccctcaag
cacaacggcaactacacgtgcatcgccagcaacgcagcggccaccgtgagcagggagcgc
cagctcatcgtgcgtgtgccccctcgatttgtggtgcagcccaataaccaggacggcatc
tatggcaaagctggggtgctcaactgctcggtcgatggctacccaccgcccaaggtcatg
tggaagcatgccaaagggagtgggaacccccagcaatatcacccagtgcccctcactggc
cgcatccagatcctacccaacagctccctgctgatacgccacgtcctggaagaggacatc
ggctactacctctgccaggccagcaacggtgtgggcactgacatcagcaaggccatgttc
ctcaccgtgaaaatcccagcaatgatcacatctcaccccaacaccacaatcgccatcaag
ggccatgccaaggagctgaactgcactgcacgtggcgagcggcccattataatccgctgg
gagaagggggacacggtcattgatcccgaccgcgtcatgcgctatgccattgctaccaag
gacaacggcgatgaggtggtctccacgcttaagctcaagccggctgaccgtggggactcc
gtgttcttcagctgccatgctatcaactcatacggagaggaccgaggtttgatccagctc
actgtgcaagaaccccctgaccccccagagctggagatccgggaggtgaaggcccggagc
atgaacctgcgctggactcagagatttgatggaaatagcatcatcactggctttgatatt
gaatacaagaacaaatcagattcctgggattttaagcagtccacacgcaacatctcccca
accatcaaccaggcaaacatcgtggacttacaccctgcgtcggtgtacagcatccgcatg
tactccttcaacaagattgggcgcagcgagccgagcaaggagcttaccatcagtacggaa
gaggctgctcccgatgggcctcccatggatgtcaccttgcaaccagtgacttcacagagc
atccaggtgacctggaaggcaccaaagaaggagctgcagaacggagtcatcaggggatac
cagattggctaccgggagaacagccccggcagcaacgggcagtacagcatcgtggaaatg
aaggcgacgggggacagtgaggtctacaccctggataacctcaagaagttcgctcagtac
ggcgtggtggtccaagccttcaaccgggcaggcacggggccctcatctagtgagatcaat
gccaccaccttggaggatgtgcccagccagcccccagagaatgtccgagctctgtccatc
acttctgacgtggctgtcatctcctggtcagagcccccacgaagcaccctcaatggtgtc
ctcaaaggctaccgggtcatcttctggtcactctacgttgatggagagtggggcgagatg
cagaatgtcaccaccacaagggagcgagtggagcttcggggtatggagaagttcaccaac
tacagcgtccaggtgctcgcctacacgcaggctggggatggtgtgcgcagcagcgtgctc
tacatccagaccaaggaagatgttccagggccccctgctggcatcaaagctgtcccttca
tcagctagcagtgtggtcgtgtcctggctgcccccaaccaagcccaatggggtgatccgc
aaatacaccatcttctgttccagccctggatccggccagccggctcccagtgagtacgag
agcagtcctgagcagctcttctaccggatcgcccacctgaaccggggacagcagtacttg
ctatgggtggctgcggtcacctctgcaggcagggggaacagcagcgagaaggtcaccatc
gagcctgctggcaaggcccctgcaaagatcatctcatttggaggcactgtaacaacaccc
tggatgaaagatgtccggctgccttgcaattcagtgggagatccagccccggctgtgaag
tggaccaaagacagtgaagactcagcaatccccgtgtccttggatggacaccggcttatc
cacaccaacggcacactgctgcttcgtgctgtgaaggctgaagactccggctattacacc
tgcacagccaccaacactggtggctttgacaccatcattgtcaaccttctggtacaagtt
cccccggaccagccccgcctcactgtctccaaaacctctgcctcttccatcaccctgacc
tggatcccaggggacaatgggggcagctccatcagaggctttgtgctgcaatactctgtg
gacaacagtgaggagtggaaggatgtgttcatcagctccagcgagcgctccttcaagcta
gacagcctcaagtgtggcacgtggtacaaggtgaagctggcagccaagaacagtgtgggc
tccgggcgcatcagcgaaatcatcgaggccaagacccatgggcgggagccttccttcagc
aaagaccaacacctcttcacccacatcaactccacgcatgctcggcttaacctgcagggc
tggaacaatggaggttgtcccatcacagccattgtcctggagtaccggcccaaggggacc
tgggcctggcagggcgtccgagccaacagctccacagatgtgtttctgacagagcttcga
gaggcgacgtggtatgagctacgcatgagggcttgcaacagcgccggctgtggcaatgag
accgcccagtttgccaccctggactacgatggcagcaccatcccacccatcaagtctgct
caaggagaaggcgatgacgtgaagaagctgttcaccatcggctgtccagtcatcctggcc
accctcggggtggcactgctctttgttgttcgaaagaagaggaaggagaaaaggctgaag
aggctccgagatgcaaagagtttggcagaaatgctgataagcaagaacaaccgaagcttc
gacacccctgtgaaagggccaccccagggtccacggctccacatcgacatcccgagggtc
cagctgctcattgaggacaaggagggcatcaaacagctgggagatgacaaagccaccatc
ccggtgactgatgccgagttcagccaagctgtcaacccacagagcttctgtactggtgtc
tctttgcaccatccggccctcatccagagcacgggacccctcatcgacatgtctgacatc
cggccaggaaccaatccagtgtccaggaagaacgtgaaatcagcccacagcacccggaac
cggtactcaagccagtggaccttgaccaagtgccaggcctccacccctgcccgaaccctc
acctccgactggcgcactgtgggctcccagcatggtgtcaccgtcactgagagtgacagc
tacagtgccagtctatcccaagacacagacaaaggaagaaacagcatggtatccacggag
agcgcatcctccacctatgaggagctggcccgggcctacgagcacgccaagctggaggag
cagctgcagcatgccaagtttgaaatcacagaatgcttcatctcggacagctcctcggac
cagatgaccacgggcaccaacgagaacgctgacagtatgacatccatgagcacaccctca
gagcctggtatctgccgcttcacggcctctccacccaagcctcaggatgctgacaggggc
aagaatgtggctgtgcccatccctcaccgagccaacaagagtgactactgcaacctgcca
ctgtataccaagtctgaggccttcttccgaaaggcagatgggcgggagccctgccctgtg
gtcccaccccgagaggcctccatgaggaacctgactcgagcctaccatacccaggcccgg
caccttactctggaccctgccagcaagcccttgggcctcccccattcaggggccaccgct
gccaccgccacggccaccttacctcagaggactctggccatgccagcccccccagctggc
acggcccccccagcacctggtcctactcccagtgagccctctgctgcccctagtgctgcc
cctccggcccccagcactgaacctccacgggccggaggcccacacaccaaaatggggggc
tccagagactcactactcgaaatgagcaccccaggggtagggcgttctcagaaacagggg
gctggcgcctattccaaatcctacaccctggtgtag
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integrated database retrieval system
