Mus pahari (shrew mouse): 110327544
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Entry
110327544 CDS
T05929
Symbol
Bnc1
Name
(RefSeq) zinc finger protein basonuclin-1 isoform X1
KO
K24146
zinc finger protein basonuclin
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110327544 (Bnc1)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110327544 (Bnc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-met
zf-C2H2_jaz
zf-C2H2_4
zf-C2H2
zf-C2H2_6
DUF1947
TNP-like_RNaseH_C
Motif
Other DBs
NCBI-GeneID:
110327544
NCBI-ProteinID:
XP_021062271
Ensembl:
MGP_PahariEiJ_G0013153
LinkDB
All DBs
Position
1:complement(53493046..53519405)
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AA seq
990 aa
AA seq
DB search
MRRSPSRGGRGAARAGDARREGRLRSGRRMAEAIGCTLNCSCQRFKPGKINPRQCEECRH
GWVAHALSKLRIPPVYPTSQVEIVQSNVVFDISSLMLYGTQAIPVRLKILLDRLFSVLKQ
DEVLQILHALDWTLQDYIRGYVLQDASGKVLDHWSIMTSEEEVATLQQFLRFGETKSIVE
LMSIQEKEEQSVIIPPATANVDIRAFIESCGHRSTSLPTPVDKGSPSSMHPFENLISNMT
FMLPFQFFNPLPPALIGSLPEQYMLEQGQDQSQDPKQELHGPFSDSSFLTSTPFQVEKEQ
CLNCPEAVPQKEDSAHLSDSSSYSIASKLERTQLSPEAKVKPERNSLSAKKGRVFCTACE
KTFYDKGTLKIHYNAVHLKIKHKCTIEGCNMVFSSLRSRNRHSANPNPRLHMPMNRNNRD
KDLRSSLNLASSEAYKRPAFTVMSPDCGPLPGYTGSVEDSKGQPTFSSIGQNGVLFPNLK
TVQPVLPFYRSPATPAELANTPGMLPSLPLLSSSIPEQLVPTDMPFDALPKKKSRKSSMP
IKIEKEAVEIAEEKRHSLCSDDDVPLQVVSEDEPEDSSPQSDRVPEEQHAQLSSEEPLPQ
GERACHLESVIESHGALSRTLEQTTLTDREAEQKVALSSVMPREVEDGGHERHFTPGLVP
QIPFPDYMELQQRLLAGGLFGALSNRGMAFPFLEESKELEHLGEHALVRQKEEARFQCDI
CKKTFKNAYSMKTHEKNTHARETHACTVEGCGAAFPSRRSRDRHSSNLSLHQKVLNEEAL
ETSEDHFRAAYLLQDVAKEAYQDVAFTPQASQTSVIFKGTSGMGSLVYPITQVHSASLES
YNSGPPSEGTILDLSTTSSMKSESSSHSSWDSDGVSEEGTALMEDSDGNCEGQSLVSGED
EYPLCVLMEKADQSLASLPSGLPITCHLCQKIYSNKGTFRAHYKTVHLRQLHKCKVPGCN
TMFSSVRSRNRHSQNPNLHKSQAASPSHLQ
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggtcgccgagccggggcggacgcggagcggcccgggcaggggacgcgcgccgg
gaaggccggctccgcagcggccgcaggatggctgaggctatcggctgtactctgaactgc
agttgccaacgtttcaaacccgggaaaataaacccccgtcagtgtgaagagtgcaggcac
ggctgggtggctcatgctctaagcaagctgaggattccccccgtgtatccaacaagccaa
gtggaaattgtccagtccaatgtggtgttcgatattagcagcctcatgctctatggaacc
caggctatccctgttcgcctgaaaatccttctggaccggctctttagtgtgctgaagcaa
gatgaggttctacagatcctccatgccctggactggacgcttcaggattacatccgtgga
tatgtgttacaggatgcctcagggaaggtgctggatcactggagcatcatgacgagtgag
gaggaagtggctaccttgcagcagttccttcgctttggagagaccaagtccatagttgag
ctcatgtcaatccaagaaaaagaagaacagtctgtcatcataccgcctgccacggcaaac
gtagacatcagggctttcatcgagagctgcggccacaggagtaccagcctccccactcct
gtggacaaaggaagccccagcagcatgcacccctttgagaaccttataagcaacatgacg
ttcatgttgcctttccagttcttcaaccctctgcctcctgctctgatagggtcgctgcct
gaacagtacatgctggagcaggggcaggaccaaagccaggaccccaaacaggagctccat
gggcccttctctgacagcagcttcttaacttccaccccattccaggttgaaaaagaacag
tgtctcaactgtccagaggctgtcccccaaaaggaagacagtgctcacttaagcgactcc
agctcatatagcattgccagtaagcttgaaaggacacagctgtcccctgaggccaaggtg
aagcctgagaggaacagccttagtgccaagaagggccgggtgttctgcactgcatgcgag
aagacattctatgacaaaggcactctgaagatccactacaacgccgtccacctgaagatc
aagcacaagtgcacgattgaagggtgtaacatggtgttcagctccctgaggagccggaac
cgacacagtgcaaaccccaaccctcgcctgcacatgccaatgaacagaaacaaccgggac
aaggatctcaggagcagcctgaacctggcaagctctgaggcctacaagcgcccagctttc
acagtgatgtctccagactgtgggcccctccctggatacactggttcagtggaggactcc
aaaggccaacctactttctcaagcattgggcaaaatggtgtgcttttccctaatctaaag
actgtccagcccgtccttcctttctaccgcagtccagccactcccgcggagctggccaac
acacccggcatgctgccttctctccctctgctgtcctcttcaatcccagaacagctggtt
cccacagacatgccatttgatgctcttcccaagaagaaatcccgcaagtccagcatgcct
atcaaaatagagaaagaagctgtggaaatagctgaggagaagagacacagtctctgctca
gatgatgacgtgcctctgcaggtagtcagtgaagacgagccagaggacagcagtcctcag
tcagacagagtacctgaggagcagcatgcacagctaagctcagaggagcctcttccacaa
ggagaaagagcctgccatcttgaatctgtgattgagtctcatggagctctcagcagaacc
cttgagcagaccacgctcactgacagggaggctgaacagaaggtagcactgagttcagtg
atgccaagagaggtggaggatggtggtcacgagcgccatttcacacctggcctggtgccc
caaatcccttttcctgactacatggagttgcagcagcgcctgctggctggggggctcttt
ggtgctttgtccaacagggggatggcttttccttttctggaagagtctaaggaactggag
cacctgggtgagcatgcactagtgaggcagaaggaagaagctcgcttccagtgtgacatc
tgcaagaagacctttaaaaacgcttacagcatgaagacgcatgagaagaatacccacgcc
cgagagacgcacgcgtgcacagtggagggctgcggggctgctttcccttcccgtaggagc
agagacagacacagctcaaacctaagcctccaccaaaaagtactgaatgaagaagcattg
gagactagtgaggaccattttcgtgcagcttaccttctgcaagatgtggccaaggaggcc
tatcaggatgtggctttcacaccacaagcatcacagacatctgtcatcttcaagggaaca
agtggcatgggcagtctggtttacccaataactcaagttcacagtgccagcctggagagc
tacaactctggcccccctagcgagggcaccatcctggatttgagcactacctcaagtatg
aagtcagagagcagcagtcattcctcctgggactctgatggtgtgagtgaggaaggcact
gcccttatggaggacagtgatggcaactgtgaaggacagagccttgtctctggggaagat
gagtaccctctctgtgtcctgatggagaaggcagaccagagccttgctagcctgccctct
ggtttgccaataacctgtcatctctgccaaaagatatacagtaacaaagggacctttaga
gcccattacaaaactgtgcacctccgccagctccacaagtgcaaagtgccaggctgcaac
acgatgttctcatccgtccgcagtaggaacagacacagtcagaatcccaacctgcacaag
agccaggctgcatctccaagccacctccagtaa
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