Mus pahari (shrew mouse): 110327555
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Entry
110327555 CDS
T05929
Symbol
Thsd4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
110327555 (Thsd4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mpah04990
]
110327555 (Thsd4)
Domain-containing proteins not elsewhere classified [BR:
mpah04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
110327555 (Thsd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
ADAMTS_CR_3
TSP1_CCN
TSP1_spondin
PLAC
Motif
Other DBs
NCBI-GeneID:
110327555
NCBI-ProteinID:
XP_021062276
Ensembl:
MGP_PahariEiJ_G0015178
LinkDB
All DBs
Position
10:complement(54878556..55438882)
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AA seq
1017 aa
AA seq
DB search
MVSYLTSCLSALGALLLLGSQLVCPQPSTEHRKVPQRMAVAEGTPEDSGGGSPGVWGSWG
PWSACSRSCSGGVMEQTRPCLPSSYRARGGSRPNGPALSITGHVVSAVRTSVPLHRSQED
QRTLAGSNASRQGPTVVRGSRHPQARGRDPSERRSRTRGPIGPGKYGYGKAPYILPLQTD
TMHTPQRLRRQRPSSRHSRSQDTSASKQGYRPPTHQFSHSRPLYQSDSGPRSGLPPSKAS
SYQLPLTHDQSYPAASSLFHSPELSSNDGARPHGAAQAFPQHLRSTAISCIGAYRQYKLC
NTNACPESGRSIREVQCASYNNKPFMGRFYEWEPFAEVKGNRKCELNCQATGYRFYVRQA
EKVIDGTPCDQNGTAICVSGQCKSIGCDDFLGSDKVVDKCGVCGGDNTGCQVVSGVFKHA
LTSLGYHRVVEIPQGATKINITEMHKSNNYLALRSRSGRSIINGNWAIDRPGKYEGGGTM
FTYKRPNEISSTAGESFLAEGPTNEILDVYMIHQQPNPGVHYEYVIMRNNAISPQVPPHR
GPGEPFNGQLETEDRGQEDGEEREKNQETEDSQVEAPEVFTSESTQTFPVRHPERFPSHR
TDNLVPPAPQPPRRSRDHNWKQLGTTECSTTCGKGSQYPIFRCVHRTTHEEVPESYCDSS
MKPTPEEEPCNLFPCPAFWDIGEWSECSKTCGLGMQHRQVLCRQVYANRSLTVQPYRCQH
LEKPETTSTCQLKICSEWQIRTDWTSCSVPCGVGQRTRDVKCVSNIGDVVHDEECNMKLR
PNDIENCDMGPCAKSWFLTEWSERCSAECGAGVRTRSVVCMTNHVSSLPLEGCGNNRPAE
TTPCDNGPCTGKVEWFTGSWSQCSIECGSGTQQREVICVRKNADTFEVLDPYECSFLEKP
PSQQVCHLKPCGAKWFSTEWSMCSKSCQGGFRVREVRCLSDDMTPGSLCDPQLKPEEKES
CNPQDCVPEVDENCKDKYYNCNVVVQARLCVYNYYKTACCASCTRVANRHMGFLGSR
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggtttcctatctcacaagctgtctcagtgccctgggcgccctcctgctgcttggttct
cagcttgtttgcccccagccctccactgaacacagaaaggtcccacaacggatggcagtg
gccgagggaaccccggaggacagtggcggtggctccccaggtgtgtggggctcttggggc
ccctggtctgcctgttcacgtagttgcagtggtggtgtgatggagcagacacggccctgc
ctgcccagctcctaccgcgctcgaggaggctcccggcccaatggccctgcactgtccatc
actggccacgttgtgtcagctgtacggacctcagtaccgctgcatagaagccaggaggac
caacgtaccctggctggctccaatgctagccgccaaggccccacagtggtgcgaggcagt
cgacacccacaggcccgaggccgtgatccttcagagagaaggagcaggacccgaggtcct
attggccctggcaagtatggctatgggaaggctccctacatcttaccgctgcagaccgat
accatgcatactccacagaggcttcggagacagaggccttcatccaggcactccaggtcc
caggacacatctgcttctaagcagggctaccggccaccaacccaccagttctcccacagc
cgacctctctaccagagcgacagtggccctcgctctggactgccgccttctaaggcttct
agctaccagctgcccttgactcatgatcaaagctatcctgcagcttcaagtctcttccac
agcccggaactgagcagcaacgatggtgctaggccccatggggcagctcaggcctttccc
cagcatctgcgatcaacagcaatctcctgcatcggggcctatcggcagtacaaactgtgc
aacaccaatgcgtgtccagaaagcggtagaagcatccgggaggtacagtgtgcatcttac
aacaacaagccattcatgggccggttttatgaatgggagccatttgcagaagtaaagggt
aatcgcaagtgtgagctgaactgccaggcaaccggctaccgcttctacgtccggcaagcc
gagaaggtcatcgatggcacaccctgtgatcagaatggcacggcgatctgtgtgtcgggg
cagtgcaagagcattggctgtgacgacttcctgggatctgacaaagtcgtggacaagtgc
ggggtgtgtggaggtgataacactggctgccaggtggtgtccggagtgttcaagcatgcc
ctcaccagcctgggctaccaccgggttgtagagattccccaaggagctacaaaaattaac
attacagagatgcacaagagcaacaattatttagccttgagaagtcgctctggccgctcc
atcatcaatgggaactgggcaatcgatcgccctgggaagtacgagggcggagggacaatg
ttcacctacaagcgaccgaacgagatctccagcactgctggggagtcctttctggctgaa
ggtcccactaatgagatcctggatgtctatatgatacaccagcagcccaacccaggagtt
cactatgagtatgtgatcatgaggaacaacgccatcagcccacaggtgccaccgcacagg
ggaccaggagaacctttcaatgggcagctggaaacggaagacagaggccaggaggacgga
gaagagagggagaagaaccaggagacggaagactcacaagtcgaggcccctgaggtattc
acgtcagaatccacgcagaccttcccagtcaggcatccggagagattcccttcccaccga
acagacaacttggtgcccccagcaccacagcccccaaggcgaagccgggaccacaactgg
aagcagctggggacgacagaatgctccaccacctgtgggaaaggatcgcagtaccctatc
ttccgctgtgtgcacagaaccacacacgaggaggttcccgagagctactgtgactccagc
atgaagccgaccccagaggaggagccctgcaaccttttcccctgcccagccttctgggac
atcggggagtggtccgagtgcagcaagacctgtggcctgggcatgcagcaccgccaggtc
ctgtgccgccaggtgtatgccaaccgtagcctgacggtgcagccctaccgctgccagcac
ctggagaagccagagacaaccagcacctgccagctcaagatctgcagcgagtggcagatt
cggactgactggacctcgtgctcggtgccctgtggcgtggggcagcggacccgagacgtg
aagtgtgtgagcaacatcggggacgtggtgcatgacgaggagtgcaacatgaagctccgg
ccaaacgacatcgagaactgtgacatggggccctgtgcaaagagctggttcctcacagaa
tggagcgaaaggtgctcagcggagtgtggggcaggagtgaggacacgttcggtggtgtgc
atgaccaaccatgtcagcagcctgccgttggaaggctgtgggaacaacaggccagcggag
actacgccgtgtgacaatgggccctgcacaggcaaggtggagtggttcactggcagctgg
agtcagtgttccatcgagtgtggcagtgggacccagcagagggaagttatctgtgttagg
aagaatgcagacacctttgaagtgctagacccttatgagtgttcattcctggagaagccc
ccaagccagcaggtctgccacctcaagccttgtggagctaaatggtttagcacagaatgg
agcatgtgctccaagagctgtcagggcggattccgggtgcgggaagttcggtgtctctca
gatgacatgaccccgggtagcctctgcgacccccagttgaaaccagaagagaaagaatct
tgtaaccctcaggactgtgtccctgaagttgatgaaaactgcaaggacaagtactacaac
tgcaatgtggtggtccaggcgcgcctctgtgtctacaactactacaagactgcctgctgt
gcctcttgcacccgagtggccaacagacacatgggttttctggggagccgataa
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integrated database retrieval system
