KEGG   Mus pahari (shrew mouse): 110327566
Entry
110327566         CDS       T05929                                 
Symbol
Copb2
Name
(RefSeq) coatomer subunit beta'
  KO
K17302  coatomer subunit beta'
Organism
mpah  Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mpah04131]
    110327566 (Copb2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mpah04147]
    110327566 (Copb2)
Membrane trafficking [BR:mpah04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    110327566 (Copb2)
Exosome [BR:mpah04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   110327566 (Copb2)
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 WD40_CDC20-Fz Beta-prop_WDR75_1st EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_SCAP PEP5_VPS11_N Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_SPT8 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_LRRK2 Beta-prop_WDR35_TULP_N Helicase_dom4_arc HEAT_GCN1
Other DBs
NCBI-GeneID: 110327566
NCBI-ProteinID: XP_021062286
Ensembl: MGP_PahariEiJ_G0015419
LinkDB
Position
10:91939076..91967393
AA seq 905 aa
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGAE
RDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKV
NQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQYPLVTPNEERNVMEEAK
GFQPLRPTAQQEPDGKPASSPVIMASQITHKEEKSLLELEVDLDNLELEDIDTTDINLDE
DILDD
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgcctcttcgacttgacatcaagagaaagctgactgctaggtctgaccgagttaagagt
gtggatttgcatccgacagaaccatggatgttggctagtctttacaatggcagtgtgtgt
gtttggaatcatgaaactcagacactggtgaagacgtttgaagtatgtgatcttcctgtt
cgagctgcaaagtttgtcgcaaggaagaactgggtggtgacaggagcagacgatatgcag
atcagagtgttcaattataacaccctggagagggtgcacatgtttgaagcacactcggac
tacattcgttgtattgctgttcatcccacccagccgttcatcctcacaagcagtgatgac
atgcttattaagctctgggactgggataaaaaatggtcttgttcacaagtgtttgaagga
cacacgcactacgttatgcagattgtgataaaccccaaagataacaatcagtttgccagt
gcatctctcgacaggaccatcaaggtgtggcagctgggctcttcatcaccaaacttcact
ctggaaggacatgaaaaaggcgtgaattgcattgattactacagtggtggtgacaagcca
tacctcatttcaggtgcagatgaccggctcgttaaaatatgggattatcagaacaaaact
tgtgtgcagaccctggaggggcatgcccagaatgtgtcgtgtgcaagcttccatcctgag
ctgcccatcatcatcacagggtcagaagatggaactgtgcgaatctggcattctagtacc
taccggcttgagagcacactgaattacggaatggagagggtgtggtgtgtggccagtctg
agagggtccaacaatgtcgctctgggctatgatgaagggagcatcattgttaagcttggc
cgggaggaacctgccatgtccatggatgccaatggaaagataatctgggccaagcattct
gaagtccagcaggccaacctgaaagcaatgggcgacactgagattaaagatggagaaaga
ttgccactggcagtaaaggacatgggcagctgtgaaatatatccacagaccattcagcac
aatcctaatgggaggtttgttgtggtgtgtggtgatggggagtatatcatctacacagca
atggcgttgaggaacaagagctttgggtctgcccaggagtttgcatgggcccacgattct
tcagagtatgcaataagagaaagcaacagtgttgtaaagatatttaaaaactttaaagaa
aaaaaatcatttaaacctgattttggagctgaaagtatctatgggggcttcttgttggga
gtcaggtctgtaaatggcttagccttctatgactgggagaatactgaactcatccgcaga
attgaaattcagcccaagcatatcttctggtctgactctggagagctggtctgtatcgcc
acggaggagtcattttttattcttaaatatctgtcagaaaaagtcttggctgcacaggaa
acacatgagggagttactgaagatggcattgaagacgcctttgaggttcttggtgaaatt
caggaaattgtgaaaactgggctgtgggtaggtgactgcttcatttacacaagttctgtg
aacagattaaactattacgtgggaggagagatagtcaccatcgcccacttggacaggaca
atgtatcttctgggctatattccaaaagacaataggctttatctgggggataaggaattg
aacattgttagctactccctgttggtttcagtcctagaataccagaccgctgtcatgcgc
agggatttcagcatggcggacaaggtcctccctaccatccccaaagaacagaggaccaga
gtggcacactttttggaaaaacagggcttcaagcagcaagcacttacagtatccacagat
cctgaacatcgttttgagcttgctcttcagcttggagagttgaaaattgcttaccagtta
gcagtggaagcagagtcggaacagaagtggaaacaacttgctgaactcgccattagtaaa
tgtcagttcagcctagcccaggagtgtctgcaccatgcccaggattatggtggtctgctg
ctcttggccacggcctctggaaacgctagtatggtgaacaagctggcagaaggtgcggag
agagacggcaaaaataacgtggcattcatgagctattttttacagggcaagcttgatgct
tgcctagagctcttgatcaggacaggaagactccctgaagctgccttcctggcccgaact
tacttacccagtcaggtctcaagggtagtgaaactgtggagggagaatctttcaaaagtc
aaccagaaagcagcagaatcccttgctgaccctacagagtatgaaaaccttttccctgga
ttaaaagaagcctttgttgttgaagaatgggtgaaggagacacatgcggatttgtggcca
gccaagcagtaccctcttgtcacgccaaatgaagaaagaaatgttatggaagaggcaaaa
ggctttcagcccttgagacccacagcccaacaggaacctgatggaaaacctgcttctagc
ccagttatcatggcctcccaaattacccacaaagaagaaaagagtttactagaactagaa
gttgatttggataacttggaattagaggatattgacacaacagacattaatctggatgaa
gatattctggatgactaa

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