Mus pahari (shrew mouse): 110327582
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Entry
110327582 CDS
T05929
Symbol
Cntn5
Name
(RefSeq) contactin-5
KO
K06761
contactin 3/4/5/6
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mpah04515
]
110327582 (Cntn5)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
mpah00537
]
110327582 (Cntn5)
Cell adhesion molecules [BR:
mpah04515
]
Immunoglobulin superfamily
Contactins
110327582 (Cntn5)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
mpah00537
]
Others
110327582 (Cntn5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Ig_C17orf99
Pur_ac_phosph_N
Ig_6
Motif
Other DBs
NCBI-GeneID:
110327582
NCBI-ProteinID:
XP_021062317
Ensembl:
MGP_PahariEiJ_G0014647
LinkDB
All DBs
Position
10:complement(5630049..6800040)
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AA seq
1092 aa
AA seq
DB search
MYLLLCLQNRSENIFPVSLIKKTLIYPTWNGLKETQNNPNIPEKGIYYSEALSGLSTSYA
ALLRIKKSSISSAFGSKSRPRFSSPPLGTLSVSPPSWRGTPQQYRSPGNLYHSSDAFRQD
ESVDYGPVFVQEPDDVIFPTDSDEKKVALNCEVRGNPSPTYRWLRNGTEIDLESDYRYSL
IDGTFIISNPSELRDSGLYQCLATNSFGSILSREATLQFAYLGNFSGRTRSAVSVREGQG
VVLMCSPPPHSPEIIYSWVFNEFPSFVAEDSRRFISQETGNLYISKVQTSDVGSYICLVK
NAVTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPFMVTAAKGTTVKMECFALGNPVPTI
TWMKVNGYIPSKSRLRKSQAVLEIPNLQLDDAGIYECTAENSRGKNSFRGQLQIYTYPHW
VQKLNDTQLDSGSPLQWECKATGKPRPTYRWLKNGAPLLPQSRVDTVNGILAIHSVNQSD
AGMYQCLAENKYGAIYASAELKILASPPSFELNQVKKSIIVTKDREVLIECKPQGSPKPA
ISWRKGDKAVRGNKRIAILPDGSLRILNASKADEGKYICQGVNIFGSAEIIASLSVKEPT
RIELTPKRTELTVGESIVLNCKAIHDSSLDVTFYWTLKGQPIDFEKEGGHFESIRADLIM
DGPPGPPGVVIVEEITESTATLSWSPATDNHSPISSYNLQARSPFSLGWQTVKTVPEVIT
GDMESAMAVDLNPWVEYEFRVVATNPIGTGDPSIPSRMIRTNEAVPKTAPSNVSGRSGRR
HELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWKEKMVTSSEASKFIYRDESVPPLTPF
EVKVGVYNNKGDGPFSQIVVICSAEGEPTAAPTDVTATSVSVSEIFVVWRHVKESLGRPQ
GFEIGYWKDTEPEDSVETVRTRGNESFVMLTGLEGDTLYHLTVRAYNGAGYGPPSREASA
TTKRHPPSEPPGNLRWEQQGSQVSLGWEPVRPLANESEVMGYKVFYRQEGHSKGQVIETQ
KPQAVVPLPEAGVYIIEVRAYSEGGDGTASSQIRVPSYSGGKITSAQSALHSLSKWSSVT
LLLALMVPSSSW
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgtatttacttttatgtctacaaaacaggagtgaaaatatttttccagtttcattaata
aagaagactttgatttatcctacatggaatggattaaaagaaactcaaaataatccaaat
attcctgagaaagggatatactactctgaagctctttctggcctttctacttcatatgct
gctttgttaagaattaagaagagttcaatctcgtctgcctttggttccaagtccagacca
cggttcagcagtcctccactaggtaccctcagtgtttctccaccaagctggcgagggaca
cctcagcagtaccgctccccaggcaacctttatcactcctcagatgccttcagacaagat
gaaagtgtggattacgggccagtatttgtgcaagaacccgatgatgtcatttttccaact
gattctgatgaaaagaaggtagccttaaattgtgaagttcgtggcaacccatctcctact
tacagatggcttcggaatggaacagaaatcgatctggagagtgactatcgctacagtctg
atagacggcaccttcatcatcagcaatccaagtgaactcagggattctggcctgtaccag
tgcttagccaccaactcttttggaagtattcttagtcgagaagccacacttcagtttgcc
tatctgggaaattttagtggccggacaagaagtgcagtctcagtgcgggaaggccagggg
gttgttctgatgtgttctccaccgccacattctccagagatcatctatagctgggtcttc
aatgagttcccttcctttgtggcagaggacagccggcggttcatatcccaagagacaggc
aacctctatatttctaaagtgcaaacatcagatgttggcagctacatttgtctggtgaaa
aatgctgtgacaaatgctcgcgtgctcagtcctccaaccccactcacgctgcgaaatgat
ggtgtgatgggagaatatgagccaaaaattgaggtccattttcctttcatggtcacagct
gctaagggaacaactgtgaagatggaatgctttgcacttggcaaccctgttccaacaatt
acttggatgaaggttaacggttacattcccagtaagtccagactgcggaaatcccaggca
gtgctggagattccaaacctgcagctggacgatgccggaatatatgaatgcacagctgaa
aactcccgtggaaaaaattcctttcgtggacagctacaaatatacacatacccacactgg
gtacagaaactgaatgatacccaactggacagcgggagtccactgcaatgggaatgcaag
gctactggaaagcccagacccacataccgctggctgaagaatggagcacccctcctgcca
cagagcagagtggacacagttaatggaatattggcgatccatagtgtgaatcaatcagat
gctgggatgtatcagtgtttggctgagaataaatatggagctatttatgcgagtgctgag
ctgaagattctagcttcaccgccctcctttgaactgaatcaagtgaagaaatcaataatt
gttaccaaagatcgggaagtgctcatagagtgcaaaccccagggctctccaaaaccagcc
atctcctggaggaagggagacaaggcagtgcggggcaataaaagaatagctattcttcca
gacggaagcttgcggatcctaaatgcttctaaagcagatgaggggaagtacatttgccaa
ggggtgaacatcttcggttcagcagagatcatagcttccctgtctgtcaaagaacctaca
aggatagagcttactcctaaaagaacagagttaactgttggagagagcattgtcctcaac
tgtaaagctatccacgactccagtttggacgtcactttctactggacactaaaaggacaa
cctattgactttgagaaagaaggcggacattttgaaagcatcagggctgatctcattatg
gatggtcccccagggccacctggagtggtcatagtggaggagattacagaaagcacagcc
actctctcatggagtccagcaactgacaaccacagccccatctcttcctacaaccttcag
gctcgcagccccttctccctgggctggcaaaccgtgaagacagtcccagaagtcatcaca
ggagacatggagtcagcaatggctgtggacctaaacccatgggtagaatacgaattccga
gtggtggccaccaatccaattggaacaggagatccaagcattccatctcgaatgatccgc
acaaacgaggcagttccaaagacggcacccagcaacgtgagtggaagaagtggaagaagg
catgagttggtcattgcctgggagccagtatcagaagagtttcagaatggggaaggcttc
ggctacatagtggcattcagacctaatggaacacgtggctggaaggaaaaaatggttacg
tcttccgaggcttccaagttcatttaccgagatgaaagtgtccctcctctcacacccttt
gaggtcaaagttggtgtttataataataaaggtgacggacccttcagccagatcgtagtc
atctgttcagctgagggagagcccactgctgctcccactgatgtcacagcgaccagtgtg
tcagtgtcagagatctttgttgtatggagacatgttaaggagagtctcggaagaccacag
gggtttgagattggttactggaaagataccgagccagaagactctgtagaaacagtccga
accagagggaatgagtcattcgtcatgttgacgggattggaaggcgacacactctatcac
ctcacagtcagggcttacaatggagccggctatgggccacccagcagggaagcgagcgcc
accacaaagaggcacccccccagcgagccacctggcaacctccggtgggagcagcagggc
tcccaggtttccctaggctgggagccagtcagacccctagccaatgagtctgaagtcatg
ggttacaaggttttttataggcaagagggtcacagcaaaggtcaagttattgagacacag
aaacctcaagctgtagtgcctctacctgaggctggagtctacattattgaagttcgagca
tacagtgaaggaggggatggaacagccagctcccaaatcagggtaccttcatattcaggt
gggaaaatcacaagcgctcagtcagccctgcactctctctccaagtggtcctcagtaaca
ctgctcttggctttgatggttccttccagttcctggtga
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integrated database retrieval system
