Mus pahari (shrew mouse): 110327633
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Entry
110327633 CDS
T05929
Symbol
Nectin1
Name
(RefSeq) nectin-1
KO
K06081
poliovirus receptor-related protein 1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03266
Virion - Herpesvirus
mpah04514
Cell adhesion molecules
mpah04520
Adherens junction
mpah05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
110327633 (Nectin1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110327633 (Nectin1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
110327633 (Nectin1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110327633 (Nectin1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mpah04515
]
110327633 (Nectin1)
04090 CD molecules [BR:
mpah04090
]
110327633 (Nectin1)
Cell adhesion molecules [BR:
mpah04515
]
Immunoglobulin superfamily
Nectin family
110327633 (Nectin1)
CD molecules [BR:
mpah04090
]
Proteins
110327633 (Nectin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_3
Ig_2
ig
I-set
Motif
Other DBs
NCBI-GeneID:
110327633
NCBI-ProteinID:
XP_021062377
Ensembl:
MGP_PahariEiJ_G0014962
LinkDB
All DBs
Position
10:38848948..38911866
Genome browser
AA seq
515 aa
AA seq
DB search
MARMGLAGAAGRWWGLALGLTAFFLPGIHTQVVQVNDSMYGFIGTDVVLHCSFANPLPSV
KITQVTWQKASNGSKQNMAIYNPTMGVSVLPPYEKRVEFLRPSFIDGTIRLSSLELEDEG
MYICEFATFPTGNRESQLNLTVMAKPTNWIEGTRAVLRARKGQDDKVLVATCTSANGKPP
SVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHRQSLACIVNYHLDRFRESLT
LNVQYEPEVTIEGFDGNWYLQRTDVKLTCKADANPPATEYHWTTLNGSLPKGVEAQNRTL
FFRGPITYSLAGTYICEATNPIGTRSGQVEVNITEFPYTPTPEHGRRAGQMPTAIIGGVA
GSVLLVLIVVGGIIVALRRRRHTFKGDYSTKKHVYGNGYSKAGIPQHHPPMAQNLQYPDD
SDDEKKAGPLGGSSYEEEEEEEGGGGGERKVGGPHPKYDEDAKRPYFTVDEAEARQDGYG
DRTLGYQYDPEQLDLAENMVSQNDGSFISKKEWYV
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggctcggatggggcttgcgggcgccgctggacgctggtggggactcgctctgggcttg
accgccttcttcctcccaggcattcacacgcaggtggtgcaggtgaacgactccatgtat
ggcttcatcggcacagatgtggtactgcactgtagctttgccaacccgctgcccagtgtg
aaaatcacccaggtcacatggcagaaggcctccaatggctccaagcagaacatggccatc
tacaacccgacaatgggtgtgtccgtgctgcctccctacgagaaacgagtggagttcctg
cgaccctccttcatcgatggcaccatccgcctctccagtctggagctggaggacgagggc
atgtacatctgtgaatttgccaccttccctacaggcaaccgtgagagccagctcaatctc
actgtgatggccaaacccaccaactggatcgagggcacccgggcggtgcttcgagccagg
aagggacaggatgacaaggtcctggtggccacctgcacctcagccaatgggaagcccccc
agtgtggtgtcctgggaaacacggctaaagggcgaggcagagtaccaggaaattcggaac
cccaacggcactgtgacagtcatcagccgttaccgcttggtgcccagcagggaggcccac
cggcagtccttggcctgcatcgtcaactatcacctggatcgcttcagggagagcctgacg
ctcaatgtgcagtatgaacctgaggtgaccatcgagggctttgatggcaactggtatctg
cagcggacagatgtgaagctcacgtgcaaagcagacgctaacccgccagccactgagtac
cactggaccacgttgaatggctctctccccaagggtgtagaggcccagaacaggaccctc
ttcttccggggacctatcacctacagcctggcaggaacctacatctgtgaggccaccaac
cctattggcacccgatcgggccaggtggaggtcaatatcacagaattcccctacaccccg
actcctgaacacgggcggcgcgcggggcagatgcccacagccatcattgggggcgtggca
ggaagtgtcctgctggtgctgattgtggttggagggatcatagtggccctgcgcaggcgc
cggcacaccttcaagggtgactacagcaccaagaagcacgtgtacggcaacggctacagc
aaggcaggcatcccgcagcatcacccgcccatggcacagaacctgcagtacccggatgac
tcggatgatgaaaagaaggccggcccgttgggcgggagcagctatgaggaggaagaggag
gaggagggcggtggaggaggcgaacgcaaggtgggcggcccccaccccaaatatgacgag
gacgccaaacggccctactttactgtggatgaggctgaagcccgtcaggacggctatggg
gaccggactctgggctaccagtacgaccctgaacagctggacttggctgagaacatggtt
tctcagaacgacgggtctttcatttccaagaaagagtggtatgtgtag
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