Mus pahari (shrew mouse): 110327645
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Entry
110327645 CDS
T05929
Symbol
Nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110327645 (Nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpah03036
]
110327645 (Nfrkb)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
110327645 (Nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
110327645
NCBI-ProteinID:
XP_021062415
Ensembl:
MGP_PahariEiJ_G0014804
LinkDB
All DBs
Position
10:26347582..26380771
Genome browser
AA seq
1309 aa
AA seq
DB search
MDSLDHMLTDPLELGPCGDGHSAGIMEDCLLGGTRVSLPEDLLEDPEIFFDVVSLSTWQE
VLSDSQREHLQQFLPQFPTDSVEQQSELILALFSGENFRFGNPLHIAQKLFRDGHFNPEV
VKYRQLCFKSQYKRYLNSQQQYFHRLLKQILASRSDLLEMARRRGPALPFPHKHHSPSRS
PEEREWRTQQRYLKVLREVKEECGDTALSSDEEATLDLQENFSFEDLSSWLPSSPARSPS
PAVPLRVVPTLSTTDMKTADKIELGDSDLKLMLKKHHEKRKHQPDHPDLLTGDLTLSDIM
TRVNAGRKGSLAALYDLAVLKKKVKEKEEKKKKKIKLIKSEAEDLAEPLSNTEGVPTLSQ
APSPLAISSIKEEPLEDIKPCLGINEISSSFFSLLLEILLLESQASLPMLEDRVLDWQSS
PASSLNSWFSAAPNWAELVLPALQYLAGESRAVPSSFSPFVEFKEKTQQWKLLGQSQDNE
KELAALFHLWLETKDQAFCKQENEDSSDAMTPVPRVRTDYVVRPSTGEEKRVFQEQERYR
YSQPHKAFTFRMHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAA
RLPNGEGTRAEICELLKDSQFLAPDVTSTQVNTVVSGALDRLHYEKDPCVKYDIGRKLWI
YLHRDRSEEEFERIHQAQAAAAKARKALQQKPKPPSKVKSSNKEGSTKGLSGPSEQSQMS
LSDCSMPPTPVTPVTPTTPALPTPISPPPVSAGNRSGSTTVSEPAKSSSGVVLVSSPTMP
QLGTMLSPAAIQTPPSSQATARLVSQSSSAGLPQVRVVAQPSLPAVSQQSVGPAQPLSQM
PAGPQIRVPVTATQTKVVPQAVMATVPVKGQTAAASVQRPGPGQTGLTVTNLPAAVSPVN
KTAMSSPGNSAPSASTTAVIQNVTGQNIIKQVSITGQLGVKPQTGNSIPLTATNFRIQGK
DVLRLPPSSITTDAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFGAGSGTAGKGISATL
HVTSNPVHAADSPAKAPSASVPSSAPAGTTVVKVTPDLKPAETSNSAFRLMPALGVSVAD
QKGKNTVASSEAKPAATIRIVQGLGVMPPKAGQTITVAAHAKQGASVAGGSGTVHSSTVS
LPSINAAVSKTVAVASGATSTPISIGTGAPTVRQVPVNTTVVSTSQSGKLPTRITVPLSV
ISQPMKGKSVVTAPIIKGNLGANLSGLGRNIILTTMPAGTKLIAGNKPVSFLTAQQLQQL
QQQGQATQVRIQTVPASHLQQGTASGSSKAVSTVVVTTAPSPKQAPEQQ
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggattccttggaccacatgctgacagatcccctagaacttggtccttgtggagatggt
cacagtgcagggatcatggaggactgccttctgggtggtaccagggttagtctgcctgaa
gaccttctggaggatcccgagatattctttgatgtcgtcagcctctccacatggcaggaa
gtactaagtgactctcagcgtgaacacctccagcagtttctgcctcagttccctacggac
agtgtggagcagcagagtgaactcatccttgccctgttcagtggggagaacttccgattc
ggaaaccctctgcacatcgcccagaagctcttccgagatggacactttaaccctgaggtg
gtcaagtatcgtcagctctgcttcaagtcacagtacaagcggtatctcaactcccagcag
cagtatttccaccggctgctgaaacagatccttgcttccaggagtgatctcttggagatg
gctcgtaggcgtggccctgctcttccctttccacacaagcaccattcaccgtcccgaagc
cccgaggagcgggagtggcggacccagcagcggtacttgaaagtcttgagggaagtgaag
gaggaatgtggtgacactgctctgtcctctgatgaggaggccacgttggatttacaagaa
aacttttcttttgaagatctcagctcatggcttccaagctctccagcacgttctcctagt
cctgcggtgcccctgagggtggtgcccacgctttccaccacggatatgaaaactgcagac
aaaatagaactgggggacagtgacctgaagttaatgttaaagaagcaccatgagaagcgg
aaacatcaaccagatcacccagaccttttgacaggggacctgaccctcagtgacatcatg
actcgagtaaatgctggcaggaagggctccctagcagccttgtatgatttggctgttctt
aaaaaaaaggtgaaggaaaaggaagagaagaaaaagaagaaaataaagttgattaagtcg
gaggcagaggatctggctgagcccctaagcaatactgaaggggtcccaactctctctcag
gccccctctcccctggcaatatcatctatcaaggaagaacccctggaagacatcaagcct
tgccttggaatcaatgaaatatcttccagttttttctctcttctgttagagatcctgctg
ctggaaagtcaggctagccttcctatgctggaggatcgagttttggactggcagtcttcg
ccagccagctccctcaacagctggttctctgctgcccccaactgggctgagttggtgttg
cctgccctgcagtatcttgctggagaaagccgagcggttccttccagtttctctccattt
gttgaattcaaagagaaaacccagcagtggaaattgcttggtcaatctcaagataacgaa
aaggaattagctgctctcttccacctgtggctagaaaccaaagaccaggccttctgtaag
caggaaaatgaagacagctcagatgccatgacacctgtccctcgagtaagaactgactat
gtggttcgacctagcacaggagaggagaaacgggtttttcaagagcaggagcgttacagg
tatagccaaccccataaggcattcacctttcgcatgcatggctttgagtctgtggtgggg
ccagtgaagggcgtgtttgacaaggagacctccctcaacaaggctcgtgagcattcactg
ctgcgctctgaccggcctgcctatgtcaccattctgtctcttgttcgggatgctgcagct
cggctgcctaatggagaaggcactcgggcagagatctgtgaactgctcaaggactctcag
tttcttgctccagatgtcaccagcactcaggtgaacacagtggtgagtggcgcactggat
cgattgcattatgagaaagacccttgtgtgaaatatgacatcggtcggaagctgtggatc
tacctgcatcgtgaccggagtgaggaagagtttgaacggattcatcaagctcaagcagca
gcagctaaagccagaaaagctcttcaacaaaaacccaagccgccatccaaggtgaagtcc
agtaataaggagggctccacgaagggccttagcggtccttctgagcagagccagatgagc
ctcagtgactgcagcatgccgcccaccccagttacgcctgtaacccccaccacgccagca
ttgcccacccccatctctcctccacctgtgtcagcggggaacagaagtggctctaccact
gtctctgagccagccaagtctagttcaggtgttgttcttgtgtcctcaccaacaatgcca
cagctaggaacgatgctttccccagctgccatccagactccacccagttctcaggccact
gcccggcttgtcagccagtccagctcagcaggactcccccaggttcgggtggtagcccag
cccagccttcctgctgtttcccagcagtcggtagggccagcacagccgctatcccagatg
ccagcaggaccacagattcgtgtaccagtcactgctacccaaaccaaagtagtgccccag
gcagttatggcaacagttccagtcaaggggcaaactgcagcggcctcggtgcaacggcct
ggacctgggcagacagggctcacagtgacaaatcttccggctgcagtcagccctgtgaac
aagacagccatgagttctcctgggaactctgctccaagtgcctccaccacagccgtcatt
cagaatgtcacaggacagaacatcatcaagcaggtgtcgatcactggacagcttggtgtg
aagcctcagacagggaacagcattccactcacagccacaaacttccgaatccagggtaag
gatgtactgcggctgccgccttcttccatcaccacagatgccaaggggcagacggttttg
agaatcactccagacatgatggccacattggccaagtctcaggttaccacagttaaactg
actcaggacctctttggggcaggaagtggcactgcaggcaaaggcatctctgctaccttg
catgttacttccaaccccgtccacgcagctgacagccctgccaaggccccttcagccagt
gttccttcatcagctccagcaggtactactgtggtcaaagtaactcctgatctcaagcca
gcagaaacttcaaattcagcttttcgcttgatgccagctcttggtgtaagtgtggcagat
cagaagggaaagaacacagtggcctcttcagaagcaaaacctgccgccacgatccgcatt
gtgcaggggctgggagtgatgccgcctaaagcgggccagaccatcactgttgcagcacat
gcaaagcaaggagcctctgttgctggaggatctggaactgtccattcttcaacggtgtcc
ttacccagtataaatgccgctgtgtcgaagactgtggctgtggcttctggggcaacaagc
acccccatcagcatcgggactggagcccccactgtgcgacaggttcctgttaacactaca
gttgtgtccacatcccagtctgggaagctgcctaccagaatcacagttcctctctctgtg
attagccagccaatgaagggcaagagtgtggtcacagcccccatcatcaaaggcaacctt
ggagccaatctcagcggactgggtcgcaacattatcctcacaaccatgccagcaggtact
aagctcattgctggcaataagccagtgagtttcctcactgctcagcagttgcagcagctt
cagcagcagggtcaggccacgcaggtgcgcatccagaccgtcccagcatcccatctgcaa
cagggcacggcttctggctcctccaaagcagtgtccaccgttgttgtgaccacagctcca
tctcctaaacaagcacctgagcaacagtga
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